Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0094g00900.t01
CDS Infomation

cds chromosome:12X:5:24220367:24241098:1 gene:VIT_05s0094g00900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:F6HAX6]
Sequence

ATGGATGGAGAAGCGCCACTGCCGGACGCCGACACGGTGATGTCCGACGCGGTACCGCCG
CCGGATCCGCATCACCAGCAGCAGCATGCCCCGGTGCCTGGGATGGAGAATATTCCGGCG
ACGCTTAGCCACGGCGGCAGATTCATCCAGTACAACATCTTCGGGAACATCTTCGAGGTC
ACGGCCAAATACAAGCCTCCAATCATGCCCATAGGGAAGGGCGCTTACGGCATCGTGTGC
TCGGCTCTGAATTCGGAGACGAACGAGCACGTGGCGCTAAAGAAAATAGCGAATGCATTC
GATAACAAAATCGATGCGAAGAGGACGCTTCGGGAGATCAAGCTTTTGCGGCACATGGAT
CATGAAAACGTTGTTGCAATTAGAGATATTATACCACCACCTCAGAGGACAGCATTTAAT
GATGTTTACATTGCATATGAGCTAATGGATACTGACCTTCATCAAATCATTCGTTCCAAT
CAAGCACTTTCAGAAGAACACTGTCAGTATTTCCTCTATCAGATCCTCCGTGGGCTGAAA
TATATACATTCGGCAAATGTTCTTCACAGGGACTTAAAGCCTAGCAATCTCCTCCTGAAT
GCCAATTGTGATTTGAAAATATGTGATTTTGGGCTAGCTCGTGTCACCTCTGAAACTGAT
TTCATGACAGAATATGTTGTTACGAGATGGTACCGAGCTCCAGAGCTGTTGTTGAACTCT
TCAGATTACACTGTGGCCATTGATGTATGGTCAGTAGGTTGCATTTTCATGGAATTGATG
GATCGGAAGCCTTTGTTTCCTGGCAGAGATCATGTGCATCAGCTACGTTTGCTTATGGAG
CTGATTGGCACCCCATCAGAGGCTGAGTTGGGGTTTTTGAATGAAAATGCAAAGAGATAC
ATTCGGCAACTTCCTATTTACCGTCGGCAGACATTCACTGAAAAGTTCCCACAAGTTCAC
CCTGTAGCTATCGATCTTGTTGAAAAGATGTTGACATTTGATCCCAGGCAGAGGATTACA
GTTGAGGAAGCCCTAGCACATCCCTATTTAACGTCTCTGCACGACATCAGTGATGAGCCT
ATATGCACGACTCCCTTCAGCTTCGATTTTGAGCAGCACGCACTGTCCGAAGAGCAGATG
AAGGAGCTCATCTACCGAGAGGCACTCGCATTTAACCCCGAGTATCAGAACTATTGA

Peptide Sequence

PEP ID

VIT_05s0094g00900.t01
PEP Infomation

pep chromosome:12X:5:24220367:24241098:1 gene:VIT_05s0094g00900 transcript:VIT_05s0094g00900.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:F6HAX6]
Sequence

MDGEAPLPDADTVMSDAVPPPDPHHQQQHAPVPGMENIPATLSHGGRFIQYNIFGNIFEV
TAKYKPPIMPIGKGAYGIVCSALNSETNEHVALKKIANAFDNKIDAKRTLREIKLLRHMD
HENVVAIRDIIPPPQRTAFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLK
YIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNS
SDYTVAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEAELGFLNENAKRY
IRQLPIYRRQTFTEKFPQVHPVAIDLVEKMLTFDPRQRITVEEALAHPYLTSLHDISDEP
ICTTPFSFDFEQHALSEEQMKELIYREALAFNPEYQNY

Transcript Sequence

Transcript ID

VIT_05s0094g00900.t01
Transcript Infomation

cdna chromosome:12X:5:24220367:24241098:1 gene:VIT_05s0094g00900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitogen-activated protein kinase [Source:UniProtKB/TrEMBL;Acc:F6HAX6]
Sequence

TTCTCTTTGACTCTCAGCTCTCATCTCCATTTCTAGGGTTCCACATAGAGGGAGAAGAAG
GGAGGCGGTGAAGAAGAGAGAAAGGGAAGGGAGATGGATGGAGAAGCGCCACTGCCGGAC
GCCGACACGGTGATGTCCGACGCGGTACCGCCGCCGGATCCGCATCACCAGCAGCAGCAT
GCCCCGGTGCCTGGGATGGAGAATATTCCGGCGACGCTTAGCCACGGCGGCAGATTCATC
CAGTACAACATCTTCGGGAACATCTTCGAGGTCACGGCCAAATACAAGCCTCCAATCATG
CCCATAGGGAAGGGCGCTTACGGCATCGTGTGCTCGGCTCTGAATTCGGAGACGAACGAG
CACGTGGCGCTAAAGAAAATAGCGAATGCATTCGATAACAAAATCGATGCGAAGAGGACG
CTTCGGGAGATCAAGCTTTTGCGGCACATGGATCATGAAAACGTTGTTGCAATTAGAGAT
ATTATACCACCACCTCAGAGGACAGCATTTAATGATGTTTACATTGCATATGAGCTAATG
GATACTGACCTTCATCAAATCATTCGTTCCAATCAAGCACTTTCAGAAGAACACTGTCAG
TATTTCCTCTATCAGATCCTCCGTGGGCTGAAATATATACATTCGGCAAATGTTCTTCAC
AGGGACTTAAAGCCTAGCAATCTCCTCCTGAATGCCAATTGTGATTTGAAAATATGTGAT
TTTGGGCTAGCTCGTGTCACCTCTGAAACTGATTTCATGACAGAATATGTTGTTACGAGA
TGGTACCGAGCTCCAGAGCTGTTGTTGAACTCTTCAGATTACACTGTGGCCATTGATGTA
TGGTCAGTAGGTTGCATTTTCATGGAATTGATGGATCGGAAGCCTTTGTTTCCTGGCAGA
GATCATGTGCATCAGCTACGTTTGCTTATGGAGCTGATTGGCACCCCATCAGAGGCTGAG
TTGGGGTTTTTGAATGAAAATGCAAAGAGATACATTCGGCAACTTCCTATTTACCGTCGG
CAGACATTCACTGAAAAGTTCCCACAAGTTCACCCTGTAGCTATCGATCTTGTTGAAAAG
ATGTTGACATTTGATCCCAGGCAGAGGATTACAGTTGAGGAAGCCCTAGCACATCCCTAT
TTAACGTCTCTGCACGACATCAGTGATGAGCCTATATGCACGACTCCCTTCAGCTTCGAT
TTTGAGCAGCACGCACTGTCCGAAGAGCAGATGAAGGAGCTCATCTACCGAGAGGCACTC
GCATTTAACCCCGAGTATCAGAACTATTGATTAATCCTGCTTCCTAACTATTGTGGCTTT
GATTAGTGTGGTTTCTGCGCTTTTTAATCATATGCTCATGATTTCCTGCTGTATATAATT
CCCATCCTAAACCTGGATGGCCCCTAAAATTAAAATGTTCCATTGTGATCAGACTTTGGG
TGACTGAAACAATTGAAATGGTGTTTG