Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0094g00810.t01
CDS Infomation

cds chromosome:12X:5:24126614:24139041:1 gene:VIT_05s0094g00810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCCATTGACTCTGAATCACCATCTCCTTCTCCAAGCAGAGACTGGTTCTTCCCTTCT
CCTTCATTCATCCACCCAAACCCAAACCCAAACCCTAGGAGGTGCGTCACCAACCCTAGG
ATTTCCAGACCTCCCAAGCCCTCTTCATTCCAGAGCTTCTCGCATTCCAGTTCCAAATAT
GCCGGGATTCGCCGCAGGGTCGAGTTCGCTCGCCGGACGGAGAGCCTCCCGGCTTCGAAC
GTGGCTCGTCCCCTTTCCGCACAGAAACCGGACGTTCCGGTGAAGAAACCGGACGTTTCA
GTGGATGTTTCGGGGGAGAAGAAATTCGCCTGGGCTTGCGCCGGCCGTTTCGGTGGTCGG
TGGCGGATGGCGATTTTGGCAGCGATTTTGGCAACAGTTTTGGCCTCTTTGCTGCACAAA
AACTTCTCCCTACATAACCAAATTAATGTTTTACAGGATCAGATTTATGAGCTCAATATG
AGATTACAAACTTGCAATATTTTGGATTATGTTGATCTTACAAATCCTGTGCCCCAGGAG
AGTGATCATCTGCCTAACAGAAACTTAAAGAATATGGCTCTGATTATTACTTTCACCCTT
TTATTCATCCCCTTTCTTATTTTTAAGTATGTTGACTACGTCTCAAAATCAAGAAGATCT
GCAGACAATATCTCTGAAGAAGTTTCCCTAAACAAGCAATTAGCATATCAGGTGGATGCG
TTTTTATCAGTCCATCCATATGCTAAGCCATTGGCATTGCTGGTTGCCACTCTACTACTT
ATTTGTCTTGGTGGATTGGCTCTCTTTGGTGTGACAGTTGATAGCTTAGCTGATTGCCTA
TGGTTATCTTGGACATATATTGCTGATTCAGGCAACCATGCAAATTCTGAAGGAATTGGT
CCAAGGCTTGTTTCAGTTTCCATTAGTTTTGGTGGGATGCTTATATTTGCAATGATGCTT
GGGCTTGTTTCTGATGCAATTTCAGAGAAGTTGGACTCACTGAGGAAAGGAAGAAGTGAA
GTGGTTGAACAAAACCACACTCTAATTCTTGGTTGGAGTGATAAATTGGGATCATTGCTC
AATCAGCTTTCAATAGCCAATGAGAGTTTGGATGGAGGAATTGTTGTAGTGCTGGCAGAG
AGAGACAAAGAGGAGATGGAACTTGACATTGCTAAAATGGAGTTTGATTTCAGAGGAACA
TCTGTTATATGCAGAAGTGGAAGCCCTCTGATTCTAGCTGACCTGAAGAAGGTATCTGTC
TCCAAGGCCCGGGCAATTATCGTCCTTGCTGAAGATGGAAATGCTGATCAGAGTGATGCT
CGTGCCTTGAGAACTGTATTAAGTCTAACAGGAGTGAAAGAAGGGCTGAGAGGACACATT
GTGGTGGAACTAAGTGATCTTGACAATGAGGTTCTTGTGAAACTTGTCGGTGGAGATCTT
GTTGAAACTGTTGTTGCTCATGATGTAATTGGTCGCTTGATGATTCAATGTGCTCGGCAG
CCAGGTCTTGCACAGATCTGGGAAGATATCCTTGGGTTTGAAAACTGTGAATTCTACATC
AAAAGATGGCCAGAGTTGGATGGCATGCAATTTGAGGATGTATTGATCAGTTTTCCTGAT
GCTATTCCTTGTGGAATCAAGGCTGCAGCCTACGGTGGTAAAATCATTCTGAATCCTGAT
GATTCTTACATTCTACAAGAAGGCGATGAAGTTCTTGTTATTGCAGAGGATGATGATACA
TATGCTCCAGCCACATTGCCTATGGTCAAAGAAGCATCATTCATCCACATTGCCCGACCA
GCAAGAAAGCCACAGAAGATCCTACTTTGTGGATGGAGGAGGGACATTGATGATATGATT
GTGGTATTGGATGCCTTCCTAGCAAATGGTTCAGAGCTCTGGATGTTCAATGATGTTCCT
GAAAAGGAGAGGGAAAGGAAGCTTATCGATGGTGGTCTTGACATTAACCGGTTGTTAAAT
ATTACATTGGTTAATCGTGAGGGAAATGCTGTAATACGGCGTCACTTGGAAAGTCTTCCT
CTGGAATCTTTTGATTCAATTTTAATTTTGGCTGATGAATCGGTGGAGGATTCAGCAATT
CAAGCAGATTCCAGATCTCTTGCCACATTACTTTTGATTCGTGATATTCAGGCAAAGCGT
CTCCCTTACAGAGAAGCCATGGTAACCCAAGGTCACAGAGGAAGCTTCTCACAAGGCTCT
TGGATAGGGGAGATGCAGCAGGCTTCAGATAAATCTGTTATAATCAGTGAAATTCTGGAC
CCAAGGACAAAAAACCTCTTATCCATGTCAAAGATCAGTGATTATGTTCTATCAAATGAG
CTTGTTAGCATGGCATTGGCCATGGTTGCAGAGGACCGCCAGATAAATGATGTGTTGGAA
GAGCTCTTCGCAGAGGAGGGAAATGAGATGCAAATAAGGCAAGCAAACCTCTATCTGCGT
GAAGGCGAGGAACTAAGTTTCTATGAGATAATCTTACGTGCTCGACAGAGGAGGGAAATT
GTGATTGGTTATCGCCAATCCTCTGCTGAGAGAGCCATCATCAATCCCCCAGCCAAAAAC
GAGAAACAGAGGTGGTCACTGAAGGATGTTTTTGTGGTAATTGCTGAGAAGGAATGA

Peptide Sequence

PEP ID

VIT_05s0094g00810.t01
PEP Infomation

pep chromosome:12X:5:24126614:24139041:1 gene:VIT_05s0094g00810 transcript:VIT_05s0094g00810.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSIDSESPSPSPSRDWFFPSPSFIHPNPNPNPRRCVTNPRISRPPKPSSFQSFSHSSSKY
AGIRRRVEFARRTESLPASNVARPLSAQKPDVPVKKPDVSVDVSGEKKFAWACAGRFGGR
WRMAILAAILATVLASLLHKNFSLHNQINVLQDQIYELNMRLQTCNILDYVDLTNPVPQE
SDHLPNRNLKNMALIITFTLLFIPFLIFKYVDYVSKSRRSADNISEEVSLNKQLAYQVDA
FLSVHPYAKPLALLVATLLLICLGGLALFGVTVDSLADCLWLSWTYIADSGNHANSEGIG
PRLVSVSISFGGMLIFAMMLGLVSDAISEKLDSLRKGRSEVVEQNHTLILGWSDKLGSLL
NQLSIANESLDGGIVVVLAERDKEEMELDIAKMEFDFRGTSVICRSGSPLILADLKKVSV
SKARAIIVLAEDGNADQSDARALRTVLSLTGVKEGLRGHIVVELSDLDNEVLVKLVGGDL
VETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWPELDGMQFEDVLISFPD
AIPCGIKAAAYGGKIILNPDDSYILQEGDEVLVIAEDDDTYAPATLPMVKEASFIHIARP
ARKPQKILLCGWRRDIDDMIVVLDAFLANGSELWMFNDVPEKERERKLIDGGLDINRLLN
ITLVNREGNAVIRRHLESLPLESFDSILILADESVEDSAIQADSRSLATLLLIRDIQAKR
LPYREAMVTQGHRGSFSQGSWIGEMQQASDKSVIISEILDPRTKNLLSMSKISDYVLSNE
LVSMALAMVAEDRQINDVLEELFAEEGNEMQIRQANLYLREGEELSFYEIILRARQRREI
VIGYRQSSAERAIINPPAKNEKQRWSLKDVFVVIAEKE

Transcript Sequence

Transcript ID

VIT_05s0094g00810.t01
Transcript Infomation

cdna chromosome:12X:5:24126614:24139041:1 gene:VIT_05s0094g00810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTGCTTTGTTGGTTTATCCTTATAATATGTCCAAAATCATATGATATAAGCCACCCACC
ACCCTCACATTATTCTAATAACAAACATTTAATTAATACCCTGTAATCATATGATTATAA
GTAACAAACCTAAGAATTAAAACTTGAACTCAAAAGAGCCCCTCATCTTTCGCTTATTTA
CATCCATGTCCATTGACTCTGAATCACCATCTCCTTCTCCAAGCAGAGACTGGTTCTTCC
CTTCTCCTTCATTCATCCACCCAAACCCAAACCCAAACCCTAGGAGGTGCGTCACCAACC
CTAGGATTTCCAGACCTCCCAAGCCCTCTTCATTCCAGAGCTTCTCGCATTCCAGTTCCA
AATATGCCGGGATTCGCCGCAGGGTCGAGTTCGCTCGCCGGACGGAGAGCCTCCCGGCTT
CGAACGTGGCTCGTCCCCTTTCCGCACAGAAACCGGACGTTCCGGTGAAGAAACCGGACG
TTTCAGTGGATGTTTCGGGGGAGAAGAAATTCGCCTGGGCTTGCGCCGGCCGTTTCGGTG
GTCGGTGGCGGATGGCGATTTTGGCAGCGATTTTGGCAACAGTTTTGGCCTCTTTGCTGC
ACAAAAACTTCTCCCTACATAACCAAATTAATGTTTTACAGGATCAGATTTATGAGCTCA
ATATGAGATTACAAACTTGCAATATTTTGGATTATGTTGATCTTACAAATCCTGTGCCCC
AGGAGAGTGATCATCTGCCTAACAGAAACTTAAAGAATATGGCTCTGATTATTACTTTCA
CCCTTTTATTCATCCCCTTTCTTATTTTTAAGTATGTTGACTACGTCTCAAAATCAAGAA
GATCTGCAGACAATATCTCTGAAGAAGTTTCCCTAAACAAGCAATTAGCATATCAGGTGG
ATGCGTTTTTATCAGTCCATCCATATGCTAAGCCATTGGCATTGCTGGTTGCCACTCTAC
TACTTATTTGTCTTGGTGGATTGGCTCTCTTTGGTGTGACAGTTGATAGCTTAGCTGATT
GCCTATGGTTATCTTGGACATATATTGCTGATTCAGGCAACCATGCAAATTCTGAAGGAA
TTGGTCCAAGGCTTGTTTCAGTTTCCATTAGTTTTGGTGGGATGCTTATATTTGCAATGA
TGCTTGGGCTTGTTTCTGATGCAATTTCAGAGAAGTTGGACTCACTGAGGAAAGGAAGAA
GTGAAGTGGTTGAACAAAACCACACTCTAATTCTTGGTTGGAGTGATAAATTGGGATCAT
TGCTCAATCAGCTTTCAATAGCCAATGAGAGTTTGGATGGAGGAATTGTTGTAGTGCTGG
CAGAGAGAGACAAAGAGGAGATGGAACTTGACATTGCTAAAATGGAGTTTGATTTCAGAG
GAACATCTGTTATATGCAGAAGTGGAAGCCCTCTGATTCTAGCTGACCTGAAGAAGGTAT
CTGTCTCCAAGGCCCGGGCAATTATCGTCCTTGCTGAAGATGGAAATGCTGATCAGAGTG
ATGCTCGTGCCTTGAGAACTGTATTAAGTCTAACAGGAGTGAAAGAAGGGCTGAGAGGAC
ACATTGTGGTGGAACTAAGTGATCTTGACAATGAGGTTCTTGTGAAACTTGTCGGTGGAG
ATCTTGTTGAAACTGTTGTTGCTCATGATGTAATTGGTCGCTTGATGATTCAATGTGCTC
GGCAGCCAGGTCTTGCACAGATCTGGGAAGATATCCTTGGGTTTGAAAACTGTGAATTCT
ACATCAAAAGATGGCCAGAGTTGGATGGCATGCAATTTGAGGATGTATTGATCAGTTTTC
CTGATGCTATTCCTTGTGGAATCAAGGCTGCAGCCTACGGTGGTAAAATCATTCTGAATC
CTGATGATTCTTACATTCTACAAGAAGGCGATGAAGTTCTTGTTATTGCAGAGGATGATG
ATACATATGCTCCAGCCACATTGCCTATGGTCAAAGAAGCATCATTCATCCACATTGCCC
GACCAGCAAGAAAGCCACAGAAGATCCTACTTTGTGGATGGAGGAGGGACATTGATGATA
TGATTGTGGTATTGGATGCCTTCCTAGCAAATGGTTCAGAGCTCTGGATGTTCAATGATG
TTCCTGAAAAGGAGAGGGAAAGGAAGCTTATCGATGGTGGTCTTGACATTAACCGGTTGT
TAAATATTACATTGGTTAATCGTGAGGGAAATGCTGTAATACGGCGTCACTTGGAAAGTC
TTCCTCTGGAATCTTTTGATTCAATTTTAATTTTGGCTGATGAATCGGTGGAGGATTCAG
CAATTCAAGCAGATTCCAGATCTCTTGCCACATTACTTTTGATTCGTGATATTCAGGCAA
AGCGTCTCCCTTACAGAGAAGCCATGGTAACCCAAGGTCACAGAGGAAGCTTCTCACAAG
GCTCTTGGATAGGGGAGATGCAGCAGGCTTCAGATAAATCTGTTATAATCAGTGAAATTC
TGGACCCAAGGACAAAAAACCTCTTATCCATGTCAAAGATCAGTGATTATGTTCTATCAA
ATGAGCTTGTTAGCATGGCATTGGCCATGGTTGCAGAGGACCGCCAGATAAATGATGTGT
TGGAAGAGCTCTTCGCAGAGGAGGGAAATGAGATGCAAATAAGGCAAGCAAACCTCTATC
TGCGTGAAGGCGAGGAACTAAGTTTCTATGAGATAATCTTACGTGCTCGACAGAGGAGGG
AAATTGTGATTGGTTATCGCCAATCCTCTGCTGAGAGAGCCATCATCAATCCCCCAGCCA
AAAACGAGAAACAGAGGTGGTCACTGAAGGATGTTTTTGTGGTAATTGCTGAGAAGGAAT
GAG