Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0094g00370.t01
CDS Infomation

cds chromosome:12X:5:23679847:23690833:-1 gene:VIT_05s0094g00370 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 [Source:UniProtKB/TrEMBL;Acc:D7T2D0]
Sequence

ATGGAATTAGAATCAAATTACGAAATTGCCCTCACCGCCGACTTCATACGCAGCCGGAAC
TTCACCAGAGTCGCTTTGCAGTTTCCGGATGAGCTCTTGAAGGATGCTACACGAGTAGTA
AAAGCTTTGAGGGACAGATTAGAGTCACCCAGTGAATCAGGAAGTGGAGATGGCAAAGAA
GTTGGGCTGTTTGTAATGGCAGATACAACATATGGTAGTTGTTGTGTGGATGAGGTTGGA
GCATCGCATATTAATGCTGACTGCGTTGTTCATTATGGACACACATGTTTGAGTCCGACA
TCAAATCTTCCAGCATTCTTTGTTTTTGGGAAGGCACCCATCAGTATATCTAATTGTGCT
GAGAATTTATCCACCTACGCATTGACTCAAGGCAAGCATATTATGGTTCTTTTTGGGCTG
GAATATTCACATGCCATAGAAATGATCAAGGAAGCATTGATGCTTGAATCATCAAAGCTA
AGTGGGTCCACATCCAACTTGGAATTCCACTTTGCTGAAGTTATGTGCTCAGTTATGAAT
CCATCAAAAGATTGTACAACCTCCAATGGGCACCTTGGATCAGTTGGCAGCTTTACTGCC
AATGAAGGTTTCGGAAAGGCAACTGGTACTAGATATAGCATTGGAGGATTGGCTTGGAAT
CTACCTGAGGGACACAGAATGGAGGACTACTTGTTGGTTTGGATTGGTGCTGATAATTCA
GCATTTGCAAATGTTGTACTGACATTCAATGGCTGTGACATAGTCAGATATGATGCAGTG
GATAATCGTTTGGTGACAGACTTATCACAACAGAGAAGGATTCTCAAGCGTAGATATTAC
TTAGTGGAGAAGGCAAAGGATTCTAATATTATTGGGCTTTTGGTGGGAACTCTTGGTGTA
GCTGGTTATCTTCATATGATCCGCCAGATGAAAGAGCTAATTGCAGCAGCGGGGAAGAAG
GCATACACTCTTGTTATGGGAAGACCAAACCCTGCAAAACTTGCCAACTTTCCTGAGTGT
GATGTTTTCATATATGTCTCTTGTGCCCAAACTGCTCTCTTGGATAGTAAAGAATTCCTA
GCTCCAGTAATTACTCCTTTCGAAGCGATGCTTGCTTTCAACAGAGGAAGTCAATGGACA
GGAGCATATGTTATGGAATTCCGTGATTTGATTTCATCATCTCCAGTGGAAGTAAGAAAC
CAATCAGAAGAAGCACGATTTTCCTTCCTTCAAGGGGGATATGTTGAAGACTTTGACTTG
AAAGAGACAGAGGATGCTGAAGAAGATGAAGACGGTGCTCTTGCTTTAGCATATGCAACA
GAGAAAGCTCTACAAGTGCGGGACAAGCACCCTAATTCCCTAATCAAGGGAACAGCTAAA
TCTGGAGGCGAGTTCTTTGCAGCCCGATCTTACCATGGCCTTGAGATGCATAGCAACGAC
TCCTCGCCTGAACCATATTTGATTGGGAGAGTTGGAAAGGCATCAGGGTACGAGGGTGAG
AAAGGCAACGAGAACTTTTGA

Peptide Sequence

PEP ID

VIT_05s0094g00370.t01
PEP Infomation

pep chromosome:12X:5:23679847:23690833:-1 gene:VIT_05s0094g00370 transcript:VIT_05s0094g00370.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 [Source:UniProtKB/TrEMBL;Acc:D7T2D0]
Sequence

MELESNYEIALTADFIRSRNFTRVALQFPDELLKDATRVVKALRDRLESPSESGSGDGKE
VGLFVMADTTYGSCCVDEVGASHINADCVVHYGHTCLSPTSNLPAFFVFGKAPISISNCA
ENLSTYALTQGKHIMVLFGLEYSHAIEMIKEALMLESSKLSGSTSNLEFHFAEVMCSVMN
PSKDCTTSNGHLGSVGSFTANEGFGKATGTRYSIGGLAWNLPEGHRMEDYLLVWIGADNS
AFANVVLTFNGCDIVRYDAVDNRLVTDLSQQRRILKRRYYLVEKAKDSNIIGLLVGTLGV
AGYLHMIRQMKELIAAAGKKAYTLVMGRPNPAKLANFPECDVFIYVSCAQTALLDSKEFL
APVITPFEAMLAFNRGSQWTGAYVMEFRDLISSSPVEVRNQSEEARFSFLQGGYVEDFDL
KETEDAEEDEDGALALAYATEKALQVRDKHPNSLIKGTAKSGGEFFAARSYHGLEMHSND
SSPEPYLIGRVGKASGYEGEKGNENF

Transcript Sequence

Transcript ID

VIT_05s0094g00370.t01
Transcript Infomation

cdna chromosome:12X:5:23679847:23690833:-1 gene:VIT_05s0094g00370 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 [Source:UniProtKB/TrEMBL;Acc:D7T2D0]
Sequence

GGAGGCTTGAGAGAGAGCAGCTGCTTCTTCACCTTCGCCCATGGAATTAGAATCAAATTA
CGAAATTGCCCTCACCGCCGACTTCATACGCAGCCGGAACTTCACCAGAGTCGCTTTGCA
GTTTCCGGATGAGCTCTTGAAGGATGCTACACGAGTAGTAAAAGCTTTGAGGGACAGATT
AGAGTCACCCAGTGAATCAGGAAGTGGAGATGGCAAAGAAGTTGGGCTGTTTGTAATGGC
AGATACAACATATGGTAGTTGTTGTGTGGATGAGGTTGGAGCATCGCATATTAATGCTGA
CTGCGTTGTTCATTATGGACACACATGTTTGAGTCCGACATCAAATCTTCCAGCATTCTT
TGTTTTTGGGAAGGCACCCATCAGTATATCTAATTGTGCTGAGAATTTATCCACCTACGC
ATTGACTCAAGGCAAGCATATTATGGTTCTTTTTGGGCTGGAATATTCACATGCCATAGA
AATGATCAAGGAAGCATTGATGCTTGAATCATCAAAGCTAAGTGGGTCCACATCCAACTT
GGAATTCCACTTTGCTGAAGTTATGTGCTCAGTTATGAATCCATCAAAAGATTGTACAAC
CTCCAATGGGCACCTTGGATCAGTTGGCAGCTTTACTGCCAATGAAGGTTTCGGAAAGGC
AACTGGTACTAGATATAGCATTGGAGGATTGGCTTGGAATCTACCTGAGGGACACAGAAT
GGAGGACTACTTGTTGGTTTGGATTGGTGCTGATAATTCAGCATTTGCAAATGTTGTACT
GACATTCAATGGCTGTGACATAGTCAGATATGATGCAGTGGATAATCGTTTGGTGACAGA
CTTATCACAACAGAGAAGGATTCTCAAGCGTAGATATTACTTAGTGGAGAAGGCAAAGGA
TTCTAATATTATTGGGCTTTTGGTGGGAACTCTTGGTGTAGCTGGTTATCTTCATATGAT
CCGCCAGATGAAAGAGCTAATTGCAGCAGCGGGGAAGAAGGCATACACTCTTGTTATGGG
AAGACCAAACCCTGCAAAACTTGCCAACTTTCCTGAGTGTGATGTTTTCATATATGTCTC
TTGTGCCCAAACTGCTCTCTTGGATAGTAAAGAATTCCTAGCTCCAGTAATTACTCCTTT
CGAAGCGATGCTTGCTTTCAACAGAGGAAGTCAATGGACAGGAGCATATGTTATGGAATT
CCGTGATTTGATTTCATCATCTCCAGTGGAAGTAAGAAACCAATCAGAAGAAGCACGATT
TTCCTTCCTTCAAGGGGGATATGTTGAAGACTTTGACTTGAAAGAGACAGAGGATGCTGA
AGAAGATGAAGACGGTGCTCTTGCTTTAGCATATGCAACAGAGAAAGCTCTACAAGTGCG
GGACAAGCACCCTAATTCCCTAATCAAGGGAACAGCTAAATCTGGAGGCGAGTTCTTTGC
AGCCCGATCTTACCATGGCCTTGAGATGCATAGCAACGACTCCTCGCCTGAACCATATTT
GATTGGGAGAGTTGGAAAGGCATCAGGGTACGAGGGTGAGAAAGGCAACGAGAACTTTTG
ATCAAGATCTTTCGAAAGTTCAGGATACCAGCATTTCTGGGCAAGGAAGTTTGGCCACTG
CAGTGTATCTTCAAGTTGATCGCCTCAAGAGGTTTGTCTCGGATTCCATTACTGTTCAAT
TTCTAGACAGTAATTATGGAATGCATTAGCTTTCCAAGTTTGATTTACTCATTTCTGGAG
TGTGTTAGTTACCTTAATTTAGGGTTTTAGGGTGTTTTTGGGGCACTCCAAGGAAGGGTA
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