Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0094g00340.t01
CDS Infomation

cds chromosome:12X:5:23657968:23659192:-1 gene:VIT_05s0094g00340 gene_biotype:protein_coding transcript_biotype:protein_coding description:Class IV chitinase [Source:UniProtKB/TrEMBL;Acc:Q7XAU6]
Sequence

ATGGCAGCCAAGCTACTAACAGTCCTTCTTGTTGGGGCCCTTTTCGGAGCTGCAGTGGCT
CAGAACTGTGGGTGTGCCTCAGGCCTATGTTGCAGTAAGTACGGGTACTGTGGCACCGGC
AGTGACTACTGCGGTGACGGTTGCCAATCGGGTCCTTGTGATTCAAGTAGCGGCAGTGGT
AGCTCGGTTTCTGATATTGTGACACAGTCATTTTTCGATGGGATAATTAATCAAGCTGCT
TCGAGTTGTGCTGGGAAGAATTTCTACACCCGTGCAGCGTTTCTCAGTGCCTTGAATTCG
TATTCTGGGTTCGGCAACGATGGTTCTACCGATGCTAATAAGCGCGAGATTGCAGCTTTC
TTCGCTCATGTCACACACGAGACTGGACACTTTTGTTATATTGAAGAAATCAATGGTGCC
TCTCATAACTACTGTGATTCAAGCAATACCCAATATCCATGTGTCTCCGGTCAAAATTAC
TACGGCCGTGGACCGCTTCAACTAACGTGGAACTACAACTATGGCGCTGCTGGAAACAGC
ATTGGATTCAATGGCTTGAGCAACCCTGGAATTGTTGCAACTGACGTGGTTACTTCATTC
AAGACCGCATTATGGTTTTGGATGAATAATGTTCACTCTGTCATAGGCCAAGGTTTTGGT
GCCACAATTCGAGCCATCAATGGTGCCGTCGAATGTAATGGTGGAAACACAGCTGCCGTT
AACGCCCGCGTTCAGTATTACAAGGACTACTGCAGTCAGCTCGGGGTTTCACCTGGTGAC
AACCTCACTTGCTGA

Peptide Sequence

PEP ID

VIT_05s0094g00340.t01
PEP Infomation

pep chromosome:12X:5:23657968:23659192:-1 gene:VIT_05s0094g00340 transcript:VIT_05s0094g00340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Class IV chitinase [Source:UniProtKB/TrEMBL;Acc:Q7XAU6]
Sequence

MAAKLLTVLLVGALFGAAVAQNCGCASGLCCSKYGYCGTGSDYCGDGCQSGPCDSSSGSG
SSVSDIVTQSFFDGIINQAASSCAGKNFYTRAAFLSALNSYSGFGNDGSTDANKREIAAF
FAHVTHETGHFCYIEEINGASHNYCDSSNTQYPCVSGQNYYGRGPLQLTWNYNYGAAGNS
IGFNGLSNPGIVATDVVTSFKTALWFWMNNVHSVIGQGFGATIRAINGAVECNGGNTAAV
NARVQYYKDYCSQLGVSPGDNLTC

Transcript Sequence

Transcript ID

VIT_05s0094g00340.t01
Transcript Infomation

cdna chromosome:12X:5:23657968:23659192:-1 gene:VIT_05s0094g00340 gene_biotype:protein_coding transcript_biotype:protein_coding description:Class IV chitinase [Source:UniProtKB/TrEMBL;Acc:Q7XAU6]
Sequence

ATCTTCACCTCCCACGTTCCCCCTTCTTTCTTCCACAAAACATCTCCCAAAAATGGCAGC
CAAGCTACTAACAGTCCTTCTTGTTGGGGCCCTTTTCGGAGCTGCAGTGGCTCAGAACTG
TGGGTGTGCCTCAGGCCTATGTTGCAGTAAGTACGGGTACTGTGGCACCGGCAGTGACTA
CTGCGGTGACGGTTGCCAATCGGGTCCTTGTGATTCAAGTAGCGGCAGTGGTAGCTCGGT
TTCTGATATTGTGACACAGTCATTTTTCGATGGGATAATTAATCAAGCTGCTTCGAGTTG
TGCTGGGAAGAATTTCTACACCCGTGCAGCGTTTCTCAGTGCCTTGAATTCGTATTCTGG
GTTCGGCAACGATGGTTCTACCGATGCTAATAAGCGCGAGATTGCAGCTTTCTTCGCTCA
TGTCACACACGAGACTGGACACTTTTGTTATATTGAAGAAATCAATGGTGCCTCTCATAA
CTACTGTGATTCAAGCAATACCCAATATCCATGTGTCTCCGGTCAAAATTACTACGGCCG
TGGACCGCTTCAACTAACGTGGAACTACAACTATGGCGCTGCTGGAAACAGCATTGGATT
CAATGGCTTGAGCAACCCTGGAATTGTTGCAACTGACGTGGTTACTTCATTCAAGACCGC
ATTATGGTTTTGGATGAATAATGTTCACTCTGTCATAGGCCAAGGTTTTGGTGCCACAAT
TCGAGCCATCAATGGTGCCGTCGAATGTAATGGTGGAAACACAGCTGCCGTTAACGCCCG
CGTTCAGTATTACAAGGACTACTGCAGTCAGCTCGGGGTTTCACCTGGTGACAACCTCAC
TTGCTGA