Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0077g02080.t01
CDS Infomation

cds chromosome:12X:5:1602118:1614367:-1 gene:VIT_05s0077g02080 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:D7SYC1]
Sequence

ATGGCGTCGTTTTCCATGGTCAATGATAAGCTTATGGATTTGAACATTCCATATAGCATA
AAGAGATCTTGCTTTTCGAGTCATGCTCTTCTTGATCTTCCTGCAAGTGGGATAGTTAGT
ATACCATTGGCACAAACAGGTGAAGGTATTGCTGAATGTGAACTTCTTAAATGGTTCGTG
AAAGAGGGGGATCAAGTTGAAGAATTCCAACCACTTTGTGAAGTTCAGAGTGATAAAGCA
ACAATAGAAATAACTAGTCGCTACAAAGGAACTGTTTCTCAAATTATCTATGTCCCTGGT
GACATTGTAAAGGTTGGAGAAAGCCTTCTGAAAATGGTTGTTGAAGAATCTCAAGGTTCA
AACCTGACCAGCAATGCTCCAGATGACATGAAATCAATGGGTGCTGAGGTATGTGACTCA
AGTATTCAAAGTTCAGACTTGAGGCACAGTAACACAGGTGGAGTTCTAGCCACACCTGCT
GTTAGGAACCTTGCAAAGCAGTATGGTGTAGATATAAATCACATCCTTGGAACTGGTCAA
GATGGGAGGGTATTAAAAGAAGATGTCCTCACACATGCAGTCCAGAAAGGACTCTGTAAA
GAACCTTCTTCCTTGAGTGTTAATTCAGTGGAGCACTTTCAAGGAGAAGAGAAATACTCT
CATACCTTAGCTGCAGATGGATGGCAATATGAAGATAAGACAGTTCCAATTCGAGGATTT
CAACGTGCAATGATTAAATCAATGACCTTGGCTGCTAAGATTCCACACTTTCATTATGTA
GAAGAGATAAATTGTGATGCACTTGTGAAACTTAAAGCATCCTTCCAAGAGGAGAATCGT
GATCCAGAAGTCAAGCACACTTTCCTCCCTTTTATGATAAAGACACTTTCGATGGCATTG
AGCAAATATCCCTTATTAAATAGCTGCTTCAATGAGGAGCTGCAAGAAATCACTGTTAAA
GGCTCCCATAATATTGGAATTGCAATGGCTACCCCACATGGTCTAGTTGTTCCTAACATA
AAGAGGGTTCAATTGCTTTCCATCTTGGAGATAACAAAGGAGCTGGCACGGCTACAACAA
TTAGCATTAGCTAACAACCTTTGTCCTGAGGATATATCTGGTGGAACAATAACTTTAAGC
AATATTGGTGCAATTGGAGGGAAGTTTGGCTCCCCCCTCCTCAACTCGCCTGAAGTTTCC
ATCATTGCAATTGGCCGACTCCAGAAAGTTCCACAGTTTGTTGATGATGAAAACGTGTAT
CCTGCATCAATTATGACTGTTAATATAGGCGCTGATCATAGAGTCCTGGATGGAGCAACA
GTTGCTAGATTTTGTAATGAGTGGAAACTATACATTGAGAAACCTGAGCAGCTCATGCTG
CATATGAAGTGA

Peptide Sequence

PEP ID

VIT_05s0077g02080.t01
PEP Infomation

pep chromosome:12X:5:1602118:1614367:-1 gene:VIT_05s0077g02080 transcript:VIT_05s0077g02080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:D7SYC1]
Sequence

MASFSMVNDKLMDLNIPYSIKRSCFSSHALLDLPASGIVSIPLAQTGEGIAECELLKWFV
KEGDQVEEFQPLCEVQSDKATIEITSRYKGTVSQIIYVPGDIVKVGESLLKMVVEESQGS
NLTSNAPDDMKSMGAEVCDSSIQSSDLRHSNTGGVLATPAVRNLAKQYGVDINHILGTGQ
DGRVLKEDVLTHAVQKGLCKEPSSLSVNSVEHFQGEEKYSHTLAADGWQYEDKTVPIRGF
QRAMIKSMTLAAKIPHFHYVEEINCDALVKLKASFQEENRDPEVKHTFLPFMIKTLSMAL
SKYPLLNSCFNEELQEITVKGSHNIGIAMATPHGLVVPNIKRVQLLSILEITKELARLQQ
LALANNLCPEDISGGTITLSNIGAIGGKFGSPLLNSPEVSIIAIGRLQKVPQFVDDENVY
PASIMTVNIGADHRVLDGATVARFCNEWKLYIEKPEQLMLHMK

Transcript Sequence

Transcript ID

VIT_05s0077g02080.t01
Transcript Infomation

cdna chromosome:12X:5:1602118:1614367:-1 gene:VIT_05s0077g02080 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [Source:UniProtKB/TrEMBL;Acc:D7SYC1]
Sequence

GTGGACTTGAAAGGCGTATACTGACACTGTAGAGTAGCCAAGTTCGACCGGTTTGCCCGC
CACCTCACTTCTCTCAGTTGGCTCTATCTTCACGTTTTTCTAGCACAGTTTCCGGAGAGC
GATGATTAGTCGGGGGATTTGGCAGCAGAAGTGTCGTAACGCCATCCGACGATGGCTGCG
TTCCTGCGCTGCCCAAACCTCGCCGCTCTCTCCGTCTCCGGTCGTATCGCTGGGGAATTC
ATCGTATATAGGGTTTTGTTCTCAACCGATCGTCTCCCGATACGCTATGGCGTCGTTTTC
CATGGTCAATGATAAGCTTATGGATTTGAACATTCCATATAGCATAAAGAGATCTTGCTT
TTCGAGTCATGCTCTTCTTGATCTTCCTGCAAGTGGGATAGTTAGTATACCATTGGCACA
AACAGGTGAAGGTATTGCTGAATGTGAACTTCTTAAATGGTTCGTGAAAGAGGGGGATCA
AGTTGAAGAATTCCAACCACTTTGTGAAGTTCAGAGTGATAAAGCAACAATAGAAATAAC
TAGTCGCTACAAAGGAACTGTTTCTCAAATTATCTATGTCCCTGGTGACATTGTAAAGGT
TGGAGAAAGCCTTCTGAAAATGGTTGTTGAAGAATCTCAAGGTTCAAACCTGACCAGCAA
TGCTCCAGATGACATGAAATCAATGGGTGCTGAGGTATGTGACTCAAGTATTCAAAGTTC
AGACTTGAGGCACAGTAACACAGGTGGAGTTCTAGCCACACCTGCTGTTAGGAACCTTGC
AAAGCAGTATGGTGTAGATATAAATCACATCCTTGGAACTGGTCAAGATGGGAGGGTATT
AAAAGAAGATGTCCTCACACATGCAGTCCAGAAAGGACTCTGTAAAGAACCTTCTTCCTT
GAGTGTTAATTCAGTGGAGCACTTTCAAGGAGAAGAGAAATACTCTCATACCTTAGCTGC
AGATGGATGGCAATATGAAGATAAGACAGTTCCAATTCGAGGATTTCAACGTGCAATGAT
TAAATCAATGACCTTGGCTGCTAAGATTCCACACTTTCATTATGTAGAAGAGATAAATTG
TGATGCACTTGTGAAACTTAAAGCATCCTTCCAAGAGGAGAATCGTGATCCAGAAGTCAA
GCACACTTTCCTCCCTTTTATGATAAAGACACTTTCGATGGCATTGAGCAAATATCCCTT
ATTAAATAGCTGCTTCAATGAGGAGCTGCAAGAAATCACTGTTAAAGGCTCCCATAATAT
TGGAATTGCAATGGCTACCCCACATGGTCTAGTTGTTCCTAACATAAAGAGGGTTCAATT
GCTTTCCATCTTGGAGATAACAAAGGAGCTGGCACGGCTACAACAATTAGCATTAGCTAA
CAACCTTTGTCCTGAGGATATATCTGGTGGAACAATAACTTTAAGCAATATTGGTGCAAT
TGGAGGGAAGTTTGGCTCCCCCCTCCTCAACTCGCCTGAAGTTTCCATCATTGCAATTGG
CCGACTCCAGAAAGTTCCACAGTTTGTTGATGATGAAAACGTGTATCCTGCATCAATTAT
GACTGTTAATATAGGCGCTGATCATAGAGTCCTGGATGGAGCAACAGTTGCTAGATTTTG
TAATGAGTGGAAACTATACATTGAGAAACCTGAGCAGCTCATGCTGCATATGAAGTGATT
CAATCCTGCCTTCCTGTAAGCAGCAGGATGTTATTTTATTTATGTCAAATAAGCCTTAAA
AGAGATGTTATTTTATGTCAAAGAAATTAGCCTTAAAATGCCGATAATTTTTCTCCCAAA
GAGACATTTCTG