Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0077g01940.t01
CDS Infomation

cds chromosome:12X:5:1516645:1526202:1 gene:VIT_05s0077g01940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAAGCCGTACATCTGATCTACTCGGCCGAGTCCATCCGGCGCACGCTTTTGACTTT
GAGGCTTTGTTTCGATATTCCTGCGCCAACGTCGATGGCTTCCCTGTCTCTTCCTCTAGC
TTCACAATCTCGCAGTTCGGGCACGGTCAGTCGAATCCTACATTTCTCATGGAAGTCGGT
GAGGGAGGTTCCCTGAAGCGATATGTGGTGAGAAAGAAGCCGCCGGGGAAGTTGTTGCAA
TCTGCTCATGCCGTGGAGAGAGAATTTCAGGTTCTTCGGGCATTAGGTCTTCATACGCAG
GTTCCAGTTCCTAAGGTTTTCTGCTTGTGTATTGATACAAGTGTGATTGGTACTGCATTT
TACATCATGGAATACTTGGAAGGACGCATATTCTTAGATCCCAAGCTACCGGGTATAACG
CCTAACAGGAGGGCTGCTATATATCGGGCAATTGCCAAAGCTTTAGCTGCTTTGCATTCT
GCTGATGTGGATTCCATCGGTCTAGAAAAGTATGGGCATCGTGACAGCTACTGCAAGCGA
CAGATAGAGAGGTGGGCCAAACAATATATTGCTTCAACTGGTGAGGGTAGGCCTGTGGGA
AATCCCAAGATGTTTGAGCTGATTGACTGGTTGCGGCAACATATTCCTCTTGAAGATTCT
AGGGCAGTAACAACAGGCCTAGTTCATGGAGACTTTCGCATTGACAATCTTGTATTTCAT
CCCATTGAGGATCGAGTGGTTGGTATTCTTGACTGGGAGTTGTCTACGCTTGGAAATCAA
ATGTGTGATGTTGCAAACATCTGCTTGCCTTACATTAAGGATCTCAGACCTGATAGACTG
GATGAAGGTTTTGAAGTTACTGGCATTCCAGAAGGGATTCCTTCACAGTCAGAATATCTG
GCAGAATACTGCTCTGCTGCTGGAAAACCATGGCCTGGCACTGCATGGAAGTTCTATATT
GCCTTTAACATGTTCCGTGGGGCATCAATCTTAGCAGGAGTATACAGTAGATGGATTATG
GGTAATGCTTCCGGAGGTGAGCGGGCCAAACATACAGGCAGAGTAGCTAATTCTCTCATA
GACACTGCATGGGCGGTTATTGAACAAAAGTCTTTGCTTCCTGAGCATCCTCCATCTGGT
CCAAAGGCACAGGATTGGGGAGAGACTGAAGATCAAAGCCTTTCAAACAGCAGAGGAAAA
TTTGTTCCTAGAAAAAAGGTCCTTGAACTTAGAAGCAGATTGATTAAGTTTATGGAAGAT
CACATATACCCTATGGAAAATGAATTCAGCAAACTTGCTAATTCTACGCTACGTTGGACA
GTACACCCAGAAGAGGAGAAATTAAAGGAGCTAGCAAAGAAAGAAGGCTTGTGGAACTTA
TGGGTACCTGCAGATAGCGCTGCTAGGGCAAGAAATCTGATTTCTGTTGGGAGAATTCTC
TCTGATGATGCATCCAATCTATTGGGTGCAGGCCTCTCAAACCTTGAATATGGGTACCTT
TGTGAGATCATGGGTCGTTCTGTTTGGGCTCCACAGGTGTTCAATTGTGGAGCTCCTGAC
ACTGGAAATATGGAGGTATTATTGCGCTACGGAAATAAAGAACAGCTCCATGAGTGGCTT
ATTCCCTTACTTGAGGGCAAGATCCGGTCGGGATTTTCAATGACAGAACCGCAAGTTGCA
TCCTCTGATGCCACCAATATTGAATGCTCTATTAGAAGACAGGGGGATTCATATATTATT
AATGGGAAGAAGTGGTGGACAAGTGGAGCCATGGATCCTAGGTGCAAACTTCTTATAGTC
ATGGGAAAAACAGACTTCACTGCCCCTATACATAAGCAGCAATCTATGATCTTAGTGGAT
ATTCAAACTCCAGGTATACACATAAAGAGACCACTGACAGTATTTGGCTTTGATGATGCA
CCTCATGGCCATGCAGAAATATCATTTGAGAATGTACGTGTGCCAGCGACAAATATTCTG
CTAGGAGAAGGGCGTGGATTTGAGATAGCCCAGGGTAGACTGGGCCCGGGAAGGTTGCAC
CACTGTATGAGACTGATTGGTGCCGCTGAGCGTGGCATGCAGTTGATGGTTCAAAGAGCT
CTCAAAAGAAGAGTTTTTGGAAAACTGATTGCTGAGCAAGGCTCATTCCTTTCAGATGTT
GCCAAGTGTCGTGTAGAACTGGAGCAAACCAAATTGTTGGTTCTTGAGGCGGCAGACCAG
CTTGATCGGCTTGGAAACAAGAAGGCCCGTGGAACCATTGCCATGGCTAAGGTAGCAGCT
CCAAACATGGCACTGAAGGTGCTTGACATGGCGATGCAAGTGCATGGCGCAGCAGGCTTA
TCATCTGACACAGTTTTGGCACATCTCTGGGCCACAGCAAGAACATTGCGTATTGCAGAT
GGCCCAGACGAAGTCCACTTGGGCACCATTGCCAAGTTAGAACTACAGAGAGCTAAGCTT
TGA

Peptide Sequence

PEP ID

VIT_05s0077g01940.t01
PEP Infomation

pep chromosome:12X:5:1516645:1526202:1 gene:VIT_05s0077g01940 transcript:VIT_05s0077g01940.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASRTSDLLGRVHPAHAFDFEALFRYSCANVDGFPVSSSSFTISQFGHGQSNPTFLMEVG
EGGSLKRYVVRKKPPGKLLQSAHAVEREFQVLRALGLHTQVPVPKVFCLCIDTSVIGTAF
YIMEYLEGRIFLDPKLPGITPNRRAAIYRAIAKALAALHSADVDSIGLEKYGHRDSYCKR
QIERWAKQYIASTGEGRPVGNPKMFELIDWLRQHIPLEDSRAVTTGLVHGDFRIDNLVFH
PIEDRVVGILDWELSTLGNQMCDVANICLPYIKDLRPDRLDEGFEVTGIPEGIPSQSEYL
AEYCSAAGKPWPGTAWKFYIAFNMFRGASILAGVYSRWIMGNASGGERAKHTGRVANSLI
DTAWAVIEQKSLLPEHPPSGPKAQDWGETEDQSLSNSRGKFVPRKKVLELRSRLIKFMED
HIYPMENEFSKLANSTLRWTVHPEEEKLKELAKKEGLWNLWVPADSAARARNLISVGRIL
SDDASNLLGAGLSNLEYGYLCEIMGRSVWAPQVFNCGAPDTGNMEVLLRYGNKEQLHEWL
IPLLEGKIRSGFSMTEPQVASSDATNIECSIRRQGDSYIINGKKWWTSGAMDPRCKLLIV
MGKTDFTAPIHKQQSMILVDIQTPGIHIKRPLTVFGFDDAPHGHAEISFENVRVPATNIL
LGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMQLMVQRALKRRVFGKLIAEQGSFLSDV
AKCRVELEQTKLLVLEAADQLDRLGNKKARGTIAMAKVAAPNMALKVLDMAMQVHGAAGL
SSDTVLAHLWATARTLRIADGPDEVHLGTIAKLELQRAKL

Transcript Sequence

Transcript ID

VIT_05s0077g01940.t01
Transcript Infomation

cdna chromosome:12X:5:1516645:1526202:1 gene:VIT_05s0077g01940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGTTTCTCAGAGATCTATTTTCCATTTCACATGGCAAGCCGTACATCTGATCTACTCGGC
CGAGTCCATCCGGCGCACGCTTTTGACTTTGAGGCTTTGTTTCGATATTCCTGCGCCAAC
GTCGATGGCTTCCCTGTCTCTTCCTCTAGCTTCACAATCTCGCAGTTCGGGCACGGTCAG
TCGAATCCTACATTTCTCATGGAAGTCGGTGAGGGAGGTTCCCTGAAGCGATATGTGGTG
AGAAAGAAGCCGCCGGGGAAGTTGTTGCAATCTGCTCATGCCGTGGAGAGAGAATTTCAG
GTTCTTCGGGCATTAGGTCTTCATACGCAGGTTCCAGTTCCTAAGGTTTTCTGCTTGTGT
ATTGATACAAGTGTGATTGGTACTGCATTTTACATCATGGAATACTTGGAAGGACGCATA
TTCTTAGATCCCAAGCTACCGGGTATAACGCCTAACAGGAGGGCTGCTATATATCGGGCA
ATTGCCAAAGCTTTAGCTGCTTTGCATTCTGCTGATGTGGATTCCATCGGTCTAGAAAAG
TATGGGCATCGTGACAGCTACTGCAAGCGACAGATAGAGAGGTGGGCCAAACAATATATT
GCTTCAACTGGTGAGGGTAGGCCTGTGGGAAATCCCAAGATGTTTGAGCTGATTGACTGG
TTGCGGCAACATATTCCTCTTGAAGATTCTAGGGCAGTAACAACAGGCCTAGTTCATGGA
GACTTTCGCATTGACAATCTTGTATTTCATCCCATTGAGGATCGAGTGGTTGGTATTCTT
GACTGGGAGTTGTCTACGCTTGGAAATCAAATGTGTGATGTTGCAAACATCTGCTTGCCT
TACATTAAGGATCTCAGACCTGATAGACTGGATGAAGGTTTTGAAGTTACTGGCATTCCA
GAAGGGATTCCTTCACAGTCAGAATATCTGGCAGAATACTGCTCTGCTGCTGGAAAACCA
TGGCCTGGCACTGCATGGAAGTTCTATATTGCCTTTAACATGTTCCGTGGGGCATCAATC
TTAGCAGGAGTATACAGTAGATGGATTATGGGTAATGCTTCCGGAGGTGAGCGGGCCAAA
CATACAGGCAGAGTAGCTAATTCTCTCATAGACACTGCATGGGCGGTTATTGAACAAAAG
TCTTTGCTTCCTGAGCATCCTCCATCTGGTCCAAAGGCACAGGATTGGGGAGAGACTGAA
GATCAAAGCCTTTCAAACAGCAGAGGAAAATTTGTTCCTAGAAAAAAGGTCCTTGAACTT
AGAAGCAGATTGATTAAGTTTATGGAAGATCACATATACCCTATGGAAAATGAATTCAGC
AAACTTGCTAATTCTACGCTACGTTGGACAGTACACCCAGAAGAGGAGAAATTAAAGGAG
CTAGCAAAGAAAGAAGGCTTGTGGAACTTATGGGTACCTGCAGATAGCGCTGCTAGGGCA
AGAAATCTGATTTCTGTTGGGAGAATTCTCTCTGATGATGCATCCAATCTATTGGGTGCA
GGCCTCTCAAACCTTGAATATGGGTACCTTTGTGAGATCATGGGTCGTTCTGTTTGGGCT
CCACAGGTGTTCAATTGTGGAGCTCCTGACACTGGAAATATGGAGGTATTATTGCGCTAC
GGAAATAAAGAACAGCTCCATGAGTGGCTTATTCCCTTACTTGAGGGCAAGATCCGGTCG
GGATTTTCAATGACAGAACCGCAAGTTGCATCCTCTGATGCCACCAATATTGAATGCTCT
ATTAGAAGACAGGGGGATTCATATATTATTAATGGGAAGAAGTGGTGGACAAGTGGAGCC
ATGGATCCTAGGTGCAAACTTCTTATAGTCATGGGAAAAACAGACTTCACTGCCCCTATA
CATAAGCAGCAATCTATGATCTTAGTGGATATTCAAACTCCAGGTATACACATAAAGAGA
CCACTGACAGTATTTGGCTTTGATGATGCACCTCATGGCCATGCAGAAATATCATTTGAG
AATGTACGTGTGCCAGCGACAAATATTCTGCTAGGAGAAGGGCGTGGATTTGAGATAGCC
CAGGGTAGACTGGGCCCGGGAAGGTTGCACCACTGTATGAGACTGATTGGTGCCGCTGAG
CGTGGCATGCAGTTGATGGTTCAAAGAGCTCTCAAAAGAAGAGTTTTTGGAAAACTGATT
GCTGAGCAAGGCTCATTCCTTTCAGATGTTGCCAAGTGTCGTGTAGAACTGGAGCAAACC
AAATTGTTGGTTCTTGAGGCGGCAGACCAGCTTGATCGGCTTGGAAACAAGAAGGCCCGT
GGAACCATTGCCATGGCTAAGGTAGCAGCTCCAAACATGGCACTGAAGGTGCTTGACATG
GCGATGCAAGTGCATGGCGCAGCAGGCTTATCATCTGACACAGTTTTGGCACATCTCTGG
GCCACAGCAAGAACATTGCGTATTGCAGATGGCCCAGACGAAGTCCACTTGGGCACCATT
GCCAAGTTAGAACTACAGAGAGCTAAGCTTTGAACGTCTGGGTCGCTTCACATTCCAATA
CTCTTCTAACGGGAAATAAAGAGTGGAGAAGATGATTGTAGTGCTACGGAATGAGAAATG
GCACCATGATTAATTAATCACTGTGACAGCAGAATAAGTGCCAAACAGTTATTATTCCAG
GCTTGGCGGCTATTATGTTTGAAAAGCATTAAATAAATTAAGTGAA