Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0077g01720.t01
CDS Infomation

cds chromosome:12X:5:1343339:1345600:1 gene:VIT_05s0077g01720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATCAAGTTCCTTTGTTTAGCTCTGCACGGGAACTGGCAAATTTGGTGCTGAGCTCC
AATCTAATCGACTGTGCTTTCACCAAAATTCTTGAACTTAAGAGAGGCCAAACAGCCTTG
CCTGTTCAATACAGACTTTATCAACTGTCTTCCAAGTGCACAATTGTAGCTTTTGTCTCT
TCACCTGACTGCACTCAATACCCTCTTCCTGGACAAGGAGATTTAGATCGGTCTCCTCTC
TTTGACTTCCTCCGTACCGAAGAATACCCGTCCGTCTCCATTAACAGAGCAGCATTAGCC
CTCTTTACCCCTCTCCATGATCATCTCTCTGGACTAACAGATGAGTTGACTCAGATTGAA
GGTCAGTTAATCATCACTGGGCACTCCCTGGGAGGATCCGTTGCTTCTCTCTTCACCTTA
CGCCTGCTAGATGGCAATTTATTAAAACCCAAATGCCGCCCCTTTTGTATCACCTTTGGT
TCACCCCTTATAGGCGACTTTGGCCTCCAACACTCCATATGGAATTCTTTCTTCCTGCAT
GTAGTGTCTAACCAAGACCCAGTCCCCGGACTCTTCCTCCCATCCGGCAGATCTCCGCTC
ACATCCTCCCATTCACAAACTACCGGTTACAAGCCCTTTGGGACATATCTCTTGTGCTCT
GAACTTGGTTGTGCTTGTTTTGACAACCCTGATTTAATTTTGGGATTGCTTAAAGTCATA
TCATCAGAGGTTGCCGGAGGATTGCAGGATGTTGACTATGGGGAGATTTTAAGAAACCTC
AAGGAGAGGGCAATCTGCAAGGGACTGCCGCAGGTGGGTGAACGGTTTGCAGATCCATTT
TCAGCTGGGATCATCATGGAACTTGAGACAATTGGATTTAATCAAACAAAGCTGCTGCAG
CATAACATTGATATCAATGCTATGATAAGAACAATGGAAGCGGAAACCAGAAGACTAATC
CAGAAAAATAAAGTTTCCGATGCCAAGAAACTGAATGACATAAAAAGAGACATGGCCCAG
CTAGAATGGTATAAGAAGAAATCGGAAATGGGTTACTACGATTGCTTCAAAAACCAGGGG
TCTAAAAGGGACCTCAACGTTGAACAGTTTAGGGGAAACCTCACAATGTACTGGGAAGAC
ATGGTTGCACAAGTACAGAGGAAGCCCCAGGAGGAAGGAGCAACATTTCGAACCCGTTGG
TTCTATGCAGGGACAGTTTATAGGAGAATGGTTGAACCACTGGACATTGCTGCCTTCTAT
AGAGAGGGTGGAACAGACTACATAAACAATGGAAGATCTCTTCATTACAAGCTGTTGCAG
CAATGGTATGAAGAAGATGTGAAACCCCCCTCTAGAGATAAGCTTGATTCCAAGAAGCAA
AAGGTGTCTGGTATCCTAACTGAGGATTCTTTGTTTTGGGCACATGTGGAGGAGGCCATC
TTGTCATGCGAATTGCTCAAGAGTAAAAACTGTACTCTTGAGCAGGGAAAATCATCATGG
GATAATCTAGTTAAGTTCGAGGAGTATGTAATGGAACAGATTAACAACTATGCAGCGTCC
CCTGAGATTTTCTTGCGGGAAAGCAGCTTCATGAAATGGTGGGGACTGTATGAGGGCTAC
ATAGATACTTGCAGTAATTCCCATGGGTCGCAATTGATCAACTTCATGAAGAAACGTAGC
TATATGAAGTATGGTTAG

Peptide Sequence

PEP ID

VIT_05s0077g01720.t01
PEP Infomation

pep chromosome:12X:5:1343339:1345600:1 gene:VIT_05s0077g01720 transcript:VIT_05s0077g01720.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNQVPLFSSARELANLVLSSNLIDCAFTKILELKRGQTALPVQYRLYQLSSKCTIVAFVS
SPDCTQYPLPGQGDLDRSPLFDFLRTEEYPSVSINRAALALFTPLHDHLSGLTDELTQIE
GQLIITGHSLGGSVASLFTLRLLDGNLLKPKCRPFCITFGSPLIGDFGLQHSIWNSFFLH
VVSNQDPVPGLFLPSGRSPLTSSHSQTTGYKPFGTYLLCSELGCACFDNPDLILGLLKVI
SSEVAGGLQDVDYGEILRNLKERAICKGLPQVGERFADPFSAGIIMELETIGFNQTKLLQ
HNIDINAMIRTMEAETRRLIQKNKVSDAKKLNDIKRDMAQLEWYKKKSEMGYYDCFKNQG
SKRDLNVEQFRGNLTMYWEDMVAQVQRKPQEEGATFRTRWFYAGTVYRRMVEPLDIAAFY
REGGTDYINNGRSLHYKLLQQWYEEDVKPPSRDKLDSKKQKVSGILTEDSLFWAHVEEAI
LSCELLKSKNCTLEQGKSSWDNLVKFEEYVMEQINNYAASPEIFLRESSFMKWWGLYEGY
IDTCSNSHGSQLINFMKKRSYMKYG

Transcript Sequence

Transcript ID

VIT_05s0077g01720.t01
Transcript Infomation

cdna chromosome:12X:5:1343339:1345600:1 gene:VIT_05s0077g01720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GATGAATCAAGTTCCTTTGTTTAGCTCTGCACGGGAACTGGCAAATTTGGTGCTGAGCTC
CAATCTAATCGACTGTGCTTTCACCAAAATTCTTGAACTTAAGAGAGGCCAAACAGCCTT
GCCTGTTCAATACAGACTTTATCAACTGTCTTCCAAGTGCACAATTGTAGCTTTTGTCTC
TTCACCTGACTGCACTCAATACCCTCTTCCTGGACAAGGAGATTTAGATCGGTCTCCTCT
CTTTGACTTCCTCCGTACCGAAGAATACCCGTCCGTCTCCATTAACAGAGCAGCATTAGC
CCTCTTTACCCCTCTCCATGATCATCTCTCTGGACTAACAGATGAGTTGACTCAGATTGA
AGGTCAGTTAATCATCACTGGGCACTCCCTGGGAGGATCCGTTGCTTCTCTCTTCACCTT
ACGCCTGCTAGATGGCAATTTATTAAAACCCAAATGCCGCCCCTTTTGTATCACCTTTGG
TTCACCCCTTATAGGCGACTTTGGCCTCCAACACTCCATATGGAATTCTTTCTTCCTGCA
TGTAGTGTCTAACCAAGACCCAGTCCCCGGACTCTTCCTCCCATCCGGCAGATCTCCGCT
CACATCCTCCCATTCACAAACTACCGGTTACAAGCCCTTTGGGACATATCTCTTGTGCTC
TGAACTTGGTTGTGCTTGTTTTGACAACCCTGATTTAATTTTGGGATTGCTTAAAGTCAT
ATCATCAGAGGTTGCCGGAGGATTGCAGGATGTTGACTATGGGGAGATTTTAAGAAACCT
CAAGGAGAGGGCAATCTGCAAGGGACTGCCGCAGGTGGGTGAACGGTTTGCAGATCCATT
TTCAGCTGGGATCATCATGGAACTTGAGACAATTGGATTTAATCAAACAAAGCTGCTGCA
GCATAACATTGATATCAATGCTATGATAAGAACAATGGAAGCGGAAACCAGAAGACTAAT
CCAGAAAAATAAAGTTTCCGATGCCAAGAAACTGAATGACATAAAAAGAGACATGGCCCA
GCTAGAATGGTATAAGAAGAAATCGGAAATGGGTTACTACGATTGCTTCAAAAACCAGGG
GTCTAAAAGGGACCTCAACGTTGAACAGTTTAGGGGAAACCTCACAATGTACTGGGAAGA
CATGGTTGCACAAGTACAGAGGAAGCCCCAGGAGGAAGGAGCAACATTTCGAACCCGTTG
GTTCTATGCAGGGACAGTTTATAGGAGAATGGTTGAACCACTGGACATTGCTGCCTTCTA
TAGAGAGGGTGGAACAGACTACATAAACAATGGAAGATCTCTTCATTACAAGCTGTTGCA
GCAATGGTATGAAGAAGATGTGAAACCCCCCTCTAGAGATAAGCTTGATTCCAAGAAGCA
AAAGGTGTCTGGTATCCTAACTGAGGATTCTTTGTTTTGGGCACATGTGGAGGAGGCCAT
CTTGTCATGCGAATTGCTCAAGAGTAAAAACTGTACTCTTGAGCAGGGAAAATCATCATG
GGATAATCTAGTTAAGTTCGAGGAGTATGTAATGGAACAGATTAACAACTATGCAGCGTC
CCCTGAGATTTTCTTGCGGGAAAGCAGCTTCATGAAATGGTGGGGACTGTATGAGGGCTA
CATAGATACTTGCAGTAATTCCCATGGGTCGCAATTGATCAACTTCATGAAGAAACGTAG
CTATATGAAGTATGGTTAG