Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0077g01700.t01
CDS Infomation

cds chromosome:12X:5:1308431:1313956:1 gene:VIT_05s0077g01700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGAAGCCTCGGGTCACTGAGATACAGGTCCGGATGGACTGTAATGGGTGCGTACAG
AAGATCAAGAAAGCCCTATACGGCATCAATGGTATATATGATCTCTATATTGACTTCCCC
CAACAAAAATTGACAATAATTGGGTGGGCGGATCCTGAAAAAATAATGAAAGCCATTAAG
AAGACGAGAAAGATTGCCACCATCTGTAGTCATACAGAACCGACAGACCCAGCCACAAAG
CCACCGGAACAAGCACCTGAAGGCGGCGGCCCACCCCCAGCAGAAGCTGCAAACCCTCCC
CCTGCAGAAGCTCCACAAGCCGAGGCTGCCCCACCAGCGGAGCCACCAAAAGACCCACCA
CCACCTGAAAATCCTCCGCCAGAGGCAACACCAGCACCTGCAGCTGCAGATGTTAATGCA
GGTAACCCAGCACGACCTAAAGATGTGGAAGAGGTTCACGTAATATACCACCACCCACCT
GAGTATGGCTACAGATATGGGTATGGTCACCGGTATGGAGGGCACTGGAACAACTACTCC
AATGTCCAAGGATTGCAACAAGAGCCACCCCCAACCGTCTACACCAATGTCCAAGGAGTC
CATCACGAGCCACCCCCGACAATGTACACCAATGTCCAAGGACTCCATCATGAGCCACCC
CCACCTGTCTATGTGACTCATAGGTACAACACATACAAGCCACCACCTTACATCACTGAA
TACGAGTACATCCGGTCGCCACCACGGCACGCACATTACAGTAGGATGGACCGCTATAGT
GAGGATTATCGCAACGTGAATAACAGCAATGGAAACATCACTTCAATGTTTAGCGATGAA
AATCCAAATGCGTGTAGAATAGTCTAG

Peptide Sequence

PEP ID

VIT_05s0077g01700.t01
PEP Infomation

pep chromosome:12X:5:1308431:1313956:1 gene:VIT_05s0077g01700 transcript:VIT_05s0077g01700.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQKPRVTEIQVRMDCNGCVQKIKKALYGINGIYDLYIDFPQQKLTIIGWADPEKIMKAIK
KTRKIATICSHTEPTDPATKPPEQAPEGGGPPPAEAANPPPAEAPQAEAAPPAEPPKDPP
PPENPPPEATPAPAAADVNAGNPARPKDVEEVHVIYHHPPEYGYRYGYGHRYGGHWNNYS
NVQGLQQEPPPTVYTNVQGVHHEPPPTMYTNVQGLHHEPPPPVYVTHRYNTYKPPPYITE
YEYIRSPPRHAHYSRMDRYSEDYRNVNNSNGNITSMFSDENPNACRIV

Transcript Sequence

Transcript ID

VIT_05s0077g01700.t01
Transcript Infomation

cdna chromosome:12X:5:1308431:1313956:1 gene:VIT_05s0077g01700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCCTCTAAATTTCCCTATTGTAATGTTATTGACAAATGGAAAAACTAAGAAATACGAATT
TTTCTATTTGAATTGTTGGAATGGCAACCCTCTCCATTCCATAGAAAACACAACCCTTTG
TTTTTTCTTCATTTTCCTGCCTTTCCCTAACTCATGATCCCAGAACTGGAGATGCAGAAG
CCTCGGGTCACTGAGATACAGGTCCGGATGGACTGTAATGGGTGCGTACAGAAGATCAAG
AAAGCCCTATACGGCATCAATGGTATATATGATCTCTATATTGACTTCCCCCAACAAAAA
TTGACAATAATTGGGTGGGCGGATCCTGAAAAAATAATGAAAGCCATTAAGAAGACGAGA
AAGATTGCCACCATCTGTAGTCATACAGAACCGACAGACCCAGCCACAAAGCCACCGGAA
CAAGCACCTGAAGGCGGCGGCCCACCCCCAGCAGAAGCTGCAAACCCTCCCCCTGCAGAA
GCTCCACAAGCCGAGGCTGCCCCACCAGCGGAGCCACCAAAAGACCCACCACCACCTGAA
AATCCTCCGCCAGAGGCAACACCAGCACCTGCAGCTGCAGATGTTAATGCAGGTAACCCA
GCACGACCTAAAGATGTGGAAGAGGTTCACGTAATATACCACCACCCACCTGAGTATGGC
TACAGATATGGGTATGGTCACCGGTATGGAGGGCACTGGAACAACTACTCCAATGTCCAA
GGATTGCAACAAGAGCCACCCCCAACCGTCTACACCAATGTCCAAGGAGTCCATCACGAG
CCACCCCCGACAATGTACACCAATGTCCAAGGACTCCATCATGAGCCACCCCCACCTGTC
TATGTGACTCATAGGTACAACACATACAAGCCACCACCTTACATCACTGAATACGAGTAC
ATCCGGTCGCCACCACGGCACGCACATTACAGTAGGATGGACCGCTATAGTGAGGATTAT
CGCAACGTGAATAACAGCAATGGAAACATCACTTCAATGTTTAGCGATGAAAATCCAAAT
GCGTGTAGAATAGTCTAGACAGGGTAGAGAAGTCAGTTTGAAAACGGAGCTCTTTCTTTT
GCCTCCAAGAGAGTCTTAGCTAGAAAGTCATTGGAGAATAATTAATGAAATAAAAGTAAT
TTGTGGCCGTGATGTTTCCTAATAAGCACGTGAAGATATTGCGAGAGGAATGAGATTCTG
AGCTTGTAAGTGGAGGAAGAATCGATCCTGCATTCCACTTCTGATAGGGCCAATACATAC
TGCCGGGTATTCATTTCTTATGTAAGAATCCTGTAAAGCATATATTCTACAAGCCTAATC
CA