Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_05s0077g00940.t01
CDS Infomation	cds chromosome:12X:5:710743:718860:-1 gene:VIT_05s0077g00940 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phytochrome [Source:UniProtKB/TrEMBL;Acc:F6H723]
Sequence	ATGAGTTCAGGAAACAGAGGAACGCAGTCGCACCACCAAGCTCAGTCGTCGGGGACAAGC AATTTGAGAGTTTACCACACTGATTCAATGAGCAAAGCCATTGCGCAGTATACAATGGAT GCTCGCCTCCACGCCGTATACGAACAGTCCGGCGAGTCCGGTAAGTCATTCGACTACTCG CAGTCGGTTAGAACCACAACGCAATCGGTCCCTGAGCAACAAATCACTGCGTATTTATCG AAAATTCAACGGGGTGGCCATATACAGCCCTTTGGGTGTATGCTTGCGGTCGATGAGGCC ACTTTTCGGGTCATTGCTTTCAGCGAAAATGCCCGAGAAATGCTCGGTCTCACTCCGCAA TCGGTTCCGAGCCTTGAGAAGCCCGAGATCCTCCTAGTAGGTACTGATGTTCGCACGCTT TTCACTCCCTCGAGCGCAGTTCTCCTCGAAAAGGCGTTTGGGGCTCGGGAAATTACGTTG TTAAATCCCGTGTGGATTCATTCCAAGAATTCTGGAAAACCCTTTTACGCAATTTTGCAT AGAATTGATGTGGGAATTGTAATTGATTTGGAGCCTGCAAGGACTGAGGACCCTGCTCTG TCTATTGCTGGGGCGGTGCAGTCGCAGAAGTTGGCCGTTCGAGCAATTTCCCATCTTCAA TCTCTTCCCGGTGGTGATATTAACCTTTTGTGTGAAACTGTGGTTGAGAATGTGAGGGAG CTTACTGGGTATGATCGGGTCATGGTTTACAAATTTCACGAGGATGAACATGGTGAGGTC GTGGCTGAGAGCAAGAGGTCTGATTTGGAGCCTTATATTGGGTTACACTATCCTGCCACG GACATTCCACAGGCTTCAAGGTTTTTGTTTAGGCAGAATCGGGTTAGGATGATCGTTGAT TGCCATGCCACGCCTGTTCTGGTGATTCAAGATGAAGGGCTTATGCAGCCTCTATGCTTA GTTGGTTCAACCCTTCGGGCTCCTCATGGCTGCCATGCACAGTATATGGCCAACATGGGT TCAACTGCCTCATTAGCGATGGCTGTCATCATCAATGGAAATGATGAGGAAGCTATTGGT GGGCGAAACTTGATGAGGCTATGGGGCCTGGTTGTTTGCCATCACACATCTGCTAGGTGC ATTCCATTTCCTCTTCGATATGCCTGTGAGTTCCTAATGCAGGCATTTGGACTCCAATTG AACATGGAACTGCAGTTAGCATCGCAATTGTCTGAGAAACATGTTTTAAGGACCCAGACT CTCTTGTGTGACATGCTCCTTCGTGATTCCCCTACTGGAATTGTTACCCAAAGTCCTAGT ATTATGGATCTTGTGAAGTGTGATGGAGCAGCACTTTATTGCCAGGGGAAGTATTATCCA ACTGGGGTGACCCCGACTGAAGCCCAGATAAAGGATATTGCAGAGTGGTTGTTGGCAAAC CATGCGGATTCAACAGGTTTAAGCACTGACAGTTTGGCTGATGCTGGCTACCCTGGGGCA GCCTCACTTGGTGATGCAGTTTGTGGAATGGCTGTTGCTTATATCACTTCAAGAGATTTT CTATTCTGGTTTCGGTCCCACACAGCAAAAGAGATCAAATGGGGTGGTGCAAAGCATCAT CCAGAGGACAAGGACGATGGGCAGAGGATGCATCCTCGTTCTTCATTCAAGGCATTTTTA GAAGTGGTCAAGAGTCGGAGTTTGCCATGGGAGAATGCGGAAATGGATGCAATTCATTCT CTGCAGCTTATTCTGCGTGACTCTTTTAAGGATGCTACTGATGGAAGCAATTCTAAGGCT GTAATGCATGCTCAGCTCGGGGAGCTAGAGTTGCAAGGGATGGATGAGTTGAGCTCTGTT GCAAGAGAAATGGTTAGGTTGATTGAAACTGCAACAGCTCCCATATTTGCGGTCGATGTT GATGGCTGCATAAATGGTTGGAATGCAAAGGTTGCGGAGTTGACGGGGCTTTCTGTTGAG GAAGCTATGGGGAAGTCCTTGGTTCATGATCTTGTTTACAAGGAATCTGAAGAAACTGTT GACAAGCTTCTTCATCATGCTCTACAAGGTGAAGAAGATAAGAATGTAGAGATAAAATTG AGGACATTTGACTCACAACAGCATAAGAAGGCTGTTTTTGTGGTCGTTAATGCTTGCTCC AGTAGGGATTACACAAATAATATAGTTGGAGTTTGCTTTGTTGGTCAGGATGTTACTGGT CAGAAAGTGGTAATGGACAAATTTATCCATATACAAGGTGATTACAAAGCTATTGTACAT AGTCCCAACCCTTTGATTCCTCCTATATTTGCTTCAGATGAGAACACAGTTTGCTCTGAG TGGAACACTGCCATGGAAAAGCTCACTGGGTGGAGCAGGGGGGACATCATTGGGAAGATG TTGGTTGGGGAGATTTTTGGCAGTAGCTGTCGGCTGAAGGGTCCGGATGCTCTGACAAAA TTCATGATTGTGTTGCACAATGCAATTGGAGGGCAAGACACAGACAAGTTTCCATTTTCC TTCTTTGACCAGAATGGAAAATATGTGCAAGCTCTTTTGACGGCAAATAAGAGAGTTAAT ATTGAGGGCCAGATTATTGGTGCCTTCTGCTTTTTGCAGATTGCAAGTCCTGAATTGCAG CAAGCTCTCAAAGTCCAAAGGCAACAGGAGAAAAAATGCTTTGCAAGGATGAAAGAGTTG GCTTACATTTGTCAGGAAATAAAGAACCCTTTAAGTGGCATACGTTTCACTAACTCTCTT TTGGAGGCCACTGACTTAACTGAAGATCAAAAGCAGTTTCTTGAGACTAGTGCTGCTTGT GAGAAGCAGATGTCAAAGATCATAAGGGATGTTGATCTGGACAGCATTGAGGATGGTTCA CTGGAGCTTGAGAGGGCTGAATTTTTACTTGGAAGTGTCATAAATGCTGTTGTTAGCCAA GTAATGATATTGTTGAGGGAAAGAGATTTACAATTGATCCGGGACATTCCTGAGGAAGTC AAAACACTGGCTGTTTATGGTGATCAAGTAAGAATTCAACAGGTTTTGGCTGATTTCTTA CTGAATATGGTGCGTTATGCACCATCCCCAGACGGTTGGATAGAGATTCAAGTTCATCCA AGATTGAAGCAAATTTCTGAAGAAGTAAAACTTATGCATATTGAATTCAGGATGGTATGC CCTGGTGAAGGTCTTCCTCCTAATCTGATTCAAGACATGTTCCATAGCAGTCGTTGGATG ACTCAGGAAGGTCTAGGGCTGAGCATGTGCAGGAAGATCTTAAAGCTCATTAATGGCGAA GTCCAATATATCAGAGAATCAGAAAGATGTTATTTTCTAATCAGCATAGAACTTCCTGTA CCTCGCAGAGGCTCAAAGAGCGTTGACTAG

Peptide Sequence

PEP ID	VIT_05s0077g00940.t01
PEP Infomation	pep chromosome:12X:5:710743:718860:-1 gene:VIT_05s0077g00940 transcript:VIT_05s0077g00940.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phytochrome [Source:UniProtKB/TrEMBL;Acc:F6H723]
Sequence	MSSGNRGTQSHHQAQSSGTSNLRVYHTDSMSKAIAQYTMDARLHAVYEQSGESGKSFDYS QSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMLAVDEATFRVIAFSENAREMLGLTPQ SVPSLEKPEILLVGTDVRTLFTPSSAVLLEKAFGAREITLLNPVWIHSKNSGKPFYAILH RIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDINLLCETVVENVRE LTGYDRVMVYKFHEDEHGEVVAESKRSDLEPYIGLHYPATDIPQASRFLFRQNRVRMIVD CHATPVLVIQDEGLMQPLCLVGSTLRAPHGCHAQYMANMGSTASLAMAVIINGNDEEAIG GRNLMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQT LLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYCQGKYYPTGVTPTEAQIKDIAEWLLAN HADSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITSRDFLFWFRSHTAKEIKWGGAKHH PEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDATDGSNSKA VMHAQLGELELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVE EAMGKSLVHDLVYKESEETVDKLLHHALQGEEDKNVEIKLRTFDSQQHKKAVFVVVNACS SRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTVCSE WNTAMEKLTGWSRGDIIGKMLVGEIFGSSCRLKGPDALTKFMIVLHNAIGGQDTDKFPFS FFDQNGKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQQALKVQRQQEKKCFARMKEL AYICQEIKNPLSGIRFTNSLLEATDLTEDQKQFLETSAACEKQMSKIIRDVDLDSIEDGS LELERAEFLLGSVINAVVSQVMILLRERDLQLIRDIPEEVKTLAVYGDQVRIQQVLADFL LNMVRYAPSPDGWIEIQVHPRLKQISEEVKLMHIEFRMVCPGEGLPPNLIQDMFHSSRWM TQEGLGLSMCRKILKLINGEVQYIRESERCYFLISIELPVPRRGSKSVD

Transcript Sequence

Transcript ID	VIT_05s0077g00940.t01
Transcript Infomation	cdna chromosome:12X:5:710743:718860:-1 gene:VIT_05s0077g00940 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phytochrome [Source:UniProtKB/TrEMBL;Acc:F6H723]
Sequence	ATGAGTTCAGGAAACAGAGGAACGCAGTCGCACCACCAAGCTCAGTCGTCGGGGACAAGC AATTTGAGAGTTTACCACACTGATTCAATGAGCAAAGCCATTGCGCAGTATACAATGGAT GCTCGCCTCCACGCCGTATACGAACAGTCCGGCGAGTCCGGTAAGTCATTCGACTACTCG CAGTCGGTTAGAACCACAACGCAATCGGTCCCTGAGCAACAAATCACTGCGTATTTATCG AAAATTCAACGGGGTGGCCATATACAGCCCTTTGGGTGTATGCTTGCGGTCGATGAGGCC ACTTTTCGGGTCATTGCTTTCAGCGAAAATGCCCGAGAAATGCTCGGTCTCACTCCGCAA TCGGTTCCGAGCCTTGAGAAGCCCGAGATCCTCCTAGTAGGTACTGATGTTCGCACGCTT TTCACTCCCTCGAGCGCAGTTCTCCTCGAAAAGGCGTTTGGGGCTCGGGAAATTACGTTG TTAAATCCCGTGTGGATTCATTCCAAGAATTCTGGAAAACCCTTTTACGCAATTTTGCAT AGAATTGATGTGGGAATTGTAATTGATTTGGAGCCTGCAAGGACTGAGGACCCTGCTCTG TCTATTGCTGGGGCGGTGCAGTCGCAGAAGTTGGCCGTTCGAGCAATTTCCCATCTTCAA TCTCTTCCCGGTGGTGATATTAACCTTTTGTGTGAAACTGTGGTTGAGAATGTGAGGGAG CTTACTGGGTATGATCGGGTCATGGTTTACAAATTTCACGAGGATGAACATGGTGAGGTC GTGGCTGAGAGCAAGAGGTCTGATTTGGAGCCTTATATTGGGTTACACTATCCTGCCACG GACATTCCACAGGCTTCAAGGTTTTTGTTTAGGCAGAATCGGGTTAGGATGATCGTTGAT TGCCATGCCACGCCTGTTCTGGTGATTCAAGATGAAGGGCTTATGCAGCCTCTATGCTTA GTTGGTTCAACCCTTCGGGCTCCTCATGGCTGCCATGCACAGTATATGGCCAACATGGGT TCAACTGCCTCATTAGCGATGGCTGTCATCATCAATGGAAATGATGAGGAAGCTATTGGT GGGCGAAACTTGATGAGGCTATGGGGCCTGGTTGTTTGCCATCACACATCTGCTAGGTGC ATTCCATTTCCTCTTCGATATGCCTGTGAGTTCCTAATGCAGGCATTTGGACTCCAATTG AACATGGAACTGCAGTTAGCATCGCAATTGTCTGAGAAACATGTTTTAAGGACCCAGACT CTCTTGTGTGACATGCTCCTTCGTGATTCCCCTACTGGAATTGTTACCCAAAGTCCTAGT ATTATGGATCTTGTGAAGTGTGATGGAGCAGCACTTTATTGCCAGGGGAAGTATTATCCA ACTGGGGTGACCCCGACTGAAGCCCAGATAAAGGATATTGCAGAGTGGTTGTTGGCAAAC CATGCGGATTCAACAGGTTTAAGCACTGACAGTTTGGCTGATGCTGGCTACCCTGGGGCA GCCTCACTTGGTGATGCAGTTTGTGGAATGGCTGTTGCTTATATCACTTCAAGAGATTTT CTATTCTGGTTTCGGTCCCACACAGCAAAAGAGATCAAATGGGGTGGTGCAAAGCATCAT CCAGAGGACAAGGACGATGGGCAGAGGATGCATCCTCGTTCTTCATTCAAGGCATTTTTA GAAGTGGTCAAGAGTCGGAGTTTGCCATGGGAGAATGCGGAAATGGATGCAATTCATTCT CTGCAGCTTATTCTGCGTGACTCTTTTAAGGATGCTACTGATGGAAGCAATTCTAAGGCT GTAATGCATGCTCAGCTCGGGGAGCTAGAGTTGCAAGGGATGGATGAGTTGAGCTCTGTT GCAAGAGAAATGGTTAGGTTGATTGAAACTGCAACAGCTCCCATATTTGCGGTCGATGTT GATGGCTGCATAAATGGTTGGAATGCAAAGGTTGCGGAGTTGACGGGGCTTTCTGTTGAG GAAGCTATGGGGAAGTCCTTGGTTCATGATCTTGTTTACAAGGAATCTGAAGAAACTGTT GACAAGCTTCTTCATCATGCTCTACAAGGTGAAGAAGATAAGAATGTAGAGATAAAATTG AGGACATTTGACTCACAACAGCATAAGAAGGCTGTTTTTGTGGTCGTTAATGCTTGCTCC AGTAGGGATTACACAAATAATATAGTTGGAGTTTGCTTTGTTGGTCAGGATGTTACTGGT CAGAAAGTGGTAATGGACAAATTTATCCATATACAAGGTGATTACAAAGCTATTGTACAT AGTCCCAACCCTTTGATTCCTCCTATATTTGCTTCAGATGAGAACACAGTTTGCTCTGAG TGGAACACTGCCATGGAAAAGCTCACTGGGTGGAGCAGGGGGGACATCATTGGGAAGATG TTGGTTGGGGAGATTTTTGGCAGTAGCTGTCGGCTGAAGGGTCCGGATGCTCTGACAAAA TTCATGATTGTGTTGCACAATGCAATTGGAGGGCAAGACACAGACAAGTTTCCATTTTCC TTCTTTGACCAGAATGGAAAATATGTGCAAGCTCTTTTGACGGCAAATAAGAGAGTTAAT ATTGAGGGCCAGATTATTGGTGCCTTCTGCTTTTTGCAGATTGCAAGTCCTGAATTGCAG CAAGCTCTCAAAGTCCAAAGGCAACAGGAGAAAAAATGCTTTGCAAGGATGAAAGAGTTG GCTTACATTTGTCAGGAAATAAAGAACCCTTTAAGTGGCATACGTTTCACTAACTCTCTT TTGGAGGCCACTGACTTAACTGAAGATCAAAAGCAGTTTCTTGAGACTAGTGCTGCTTGT GAGAAGCAGATGTCAAAGATCATAAGGGATGTTGATCTGGACAGCATTGAGGATGGTTCA CTGGAGCTTGAGAGGGCTGAATTTTTACTTGGAAGTGTCATAAATGCTGTTGTTAGCCAA GTAATGATATTGTTGAGGGAAAGAGATTTACAATTGATCCGGGACATTCCTGAGGAAGTC AAAACACTGGCTGTTTATGGTGATCAAGTAAGAATTCAACAGGTTTTGGCTGATTTCTTA CTGAATATGGTGCGTTATGCACCATCCCCAGACGGTTGGATAGAGATTCAAGTTCATCCA AGATTGAAGCAAATTTCTGAAGAAGTAAAACTTATGCATATTGAATTCAGGATGGTATGC CCTGGTGAAGGTCTTCCTCCTAATCTGATTCAAGACATGTTCCATAGCAGTCGTTGGATG ACTCAGGAAGGTCTAGGGCTGAGCATGTGCAGGAAGATCTTAAAGCTCATTAATGGCGAA GTCCAATATATCAGAGAATCAGAAAGATGTTATTTTCTAATCAGCATAGAACTTCCTGTA CCTCGCAGAGGCTCAAAGAGCGTTGACTAGGTTATTGGCACCAATGAGTCTCCAAACTTC AGGCCCTTCTCTCGCTTCAACTTCAGATGCAACTTCTGGCATACACAACCCACTTAAAAG CTTCAGGCTCAGTACAAGAGTCACCCAGATGGGCTAATGGGTATTCAATAAAACTACTTC AACATCCATTTTGGAGTGTTTCGTCCCTTCTGTGTTCCAACACACTCTAATATAATATAC ACCCTGGTTGATTTCACATCTCAGTGTAGTCCTAAAGTGTTCTCAGGAACCGGGTTATGC CAGATCCTACTGCAAGGGTGTGCCTCAAGTGATCCATCAACAGAGTCGGGGTCAGGGGTC AATTGCAGATTCTTTGATAACCGGGTTTGCACTTGCAGGTAAATCTGAGTAGGGTTTCTG CCTTAAGCATGTTATACTAGATAGAATATTTGTATTATGCCCTCTCAAGTTCTCCAAGAG TGGCTGTACAATATCTACTTCTTCAGGTCTAAGCTATTCTTTTTCTTTCCTTTTTTGGTG TGATAAAACAAATTCTCTTACTCTATGCTTCAAGATTATGTAACATGAGTACTAATAATC TAATCTAAATATACTCTAATTCCCCATTCTA