Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0077g00590.t01
CDS Infomation

cds chromosome:12X:5:397776:400362:1 gene:VIT_05s0077g00590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGCACTTGTACGGACGCCACATATTACGACAAATCTCACTCCAAAGCTCATTAGA
CTGGTGGGCAATGGAGGGATTACATGGAACCAAACCCCTTTTTTGACATTCTCAAAAGGG
TACTCTTCAATTTCTGCAAATAGGCTAAGAAAATCAGTGGTTGCTGAGGCAAAGAAGAGG
AAGAAAGACAGCGTCGATGCCCACAACTTCGTCCCCAAACCAGATGAAGCCACCGGCGTT
TTCCCTGAAGCTGTGCTGCTCAAAGAGAAGAAAGCTCAGGAAGATGGTAGTTTTCTCCCA
GAGTTTGCAGATGCTGAAGAAGAAGAACTTTATGAATTTCTGAATCTTCAGCTGGAAAGT
GATTTGAATGTGGAACGAATGCGCCACTATGAAGTGGTTTATTTAATACATGAGAAGCAT
GATGAGGAGGTTGAGAATGTCAATTCCAAAGTGCAAGATTTTATAAGGGAGAAAAAGGGT
AAGCTTTGGCGACTGAACGATTGGGGTCTTCGAAGACTAGCGTACAAGATACAGAAAGCA
AAGAATGCCCACTACATCTTGATGAACTTCGAGCTGGAAGCCCAATGGATTAATGATTTC
AAGACCATGCTAGACCAAGACGAAAGAGTCATCCGGCACCTTGTAATAAAGAGAGACGAG
GCAATCACAGAGGACTGCCCCCCTCCTCCTGAGTTCCACACTCTTCGAGCAGGTACCGAT
GATTATGATGACGAGGAGGATGATGTAGACTATGATGATGAAGATGATTGGGATGGTGAG
GGTGAGGTGGACTCAAACAGCTACAGTGATGATGTCGTAGATGTTATTGTTCCTGTCAAC
AGTGATGATAGAGAAGATAAGAATGTTGGAAGGAGAAACTTGAGAGCTGAGAAAGTAGGT
AGGTAG

Peptide Sequence

PEP ID

VIT_05s0077g00590.t01
PEP Infomation

pep chromosome:12X:5:397776:400362:1 gene:VIT_05s0077g00590 transcript:VIT_05s0077g00590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDALVRTPHITTNLTPKLIRLVGNGGITWNQTPFLTFSKGYSSISANRLRKSVVAEAKKR
KKDSVDAHNFVPKPDEATGVFPEAVLLKEKKAQEDGSFLPEFADAEEEELYEFLNLQLES
DLNVERMRHYEVVYLIHEKHDEEVENVNSKVQDFIREKKGKLWRLNDWGLRRLAYKIQKA
KNAHYILMNFELEAQWINDFKTMLDQDERVIRHLVIKRDEAITEDCPPPPEFHTLRAGTD
DYDDEEDDVDYDDEDDWDGEGEVDSNSYSDDVVDVIVPVNSDDREDKNVGRRNLRAEKVG
R

Transcript Sequence

Transcript ID

VIT_05s0077g00590.t01
Transcript Infomation

cdna chromosome:12X:5:397776:400362:1 gene:VIT_05s0077g00590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGCAATGGATGCACTTGTACGGACGCCACATATTACGACAAATCTCACTCCAAAGCTCA
TTAGACTGGTGGGCAATGGAGGGATTACATGGAACCAAACCCCTTTTTTGACATTCTCAA
AAGGGTACTCTTCAATTTCTGCAAATAGGCTAAGAAAATCAGTGGTTGCTGAGGCAAAGA
AGAGGAAGAAAGACAGCGTCGATGCCCACAACTTCGTCCCCAAACCAGATGAAGCCACCG
GCGTTTTCCCTGAAGCTGTGCTGCTCAAAGAGAAGAAAGCTCAGGAAGATGGTAGTTTTC
TCCCAGAGTTTGCAGATGCTGAAGAAGAAGAACTTTATGAATTTCTGAATCTTCAGCTGG
AAAGTGATTTGAATGTGGAACGAATGCGCCACTATGAAGTGGTTTATTTAATACATGAGA
AGCATGATGAGGAGGTTGAGAATGTCAATTCCAAAGTGCAAGATTTTATAAGGGAGAAAA
AGGGTAAGCTTTGGCGACTGAACGATTGGGGTCTTCGAAGACTAGCGTACAAGATACAGA
AAGCAAAGAATGCCCACTACATCTTGATGAACTTCGAGCTGGAAGCCCAATGGATTAATG
ATTTCAAGACCATGCTAGACCAAGACGAAAGAGTCATCCGGCACCTTGTAATAAAGAGAG
ACGAGGCAATCACAGAGGACTGCCCCCCTCCTCCTGAGTTCCACACTCTTCGAGCAGGTA
CCGATGATTATGATGACGAGGAGGATGATGTAGACTATGATGATGAAGATGATTGGGATG
GTGAGGGTGAGGTGGACTCAAACAGCTACAGTGATGATGTCGTAGATGTTATTGTTCCTG
TCAACAGTGATGATAGAGAAGATAAGAATGTTGGAAGGAGAAACTTGAGAGCTGAGAAAG
TAGGTAGGTAGTTACTTTCTGTTGTCATTTAATTTGTGTTTTGTTTTGAGAGAGATCCAG
AACAGAGTCATGAATTTTGTTTTTGGGTACAGTTTTGTTTTGTATGAC