Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0077g00060.t01
CDS Infomation

cds chromosome:12X:5_random:24864:46797:1 gene:VIT_05s0077g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGCACTTGGAGGCTTCGCTGCTGCGTCTCTTTCTCCTCCACCTCCCCATTATTCC
ACCATTCTTCAGACTCCACCATGGAAATCTCTGCCGCAAAGAATTGGACAGCCTCGACTG
TGGAGTCCCTTGTTGTGTATAAGCAAAAATGTAAGTTATGGATTGCGTCCTAAATTGAGG
AAATATACTGCCAGTCTTCAGAAAGAATTAAATTGTTCAGAAAAGTTTAAGCATCACGTC
TCTGTTCATTTTGTGCGATTGGTTGTTGGAGTGATGCTGGTTATGTCAGTTTCTGTTGGC
GTTAGTAGGCCACCCTCCTGGGCCCTCACTGAAGAAAATCTCCTTTTCTTAGAGGCATGG
AGGACAATTGACCGTGCATATGTTGACAAAACATTTAATGGTCAAAGTTGGTTTCGCTAC
AGAGAAAATGCACTGCGTAATGAACCAATGAACACACGAGAAGAGACATATATCGCAATA
AAGAAGATGCTTGCCACACTTGATGATCCTTTCACACGCTTTCTGGAGCCTGACAAGTTT
AAGAGTTTGCGGTCTGGAACTCAAGGTGCTCTTACAGGTGTAGGGTTGTCAATTGGATAC
CCTACTGGATTTGATGGATCACCTGCTGGGCTTCTTGTTATTTCAGCTTCTCCAGGAGGT
CCTGCAAGTAGAGCTGGCATTTTGTCTGGGGATGTTATCCTTACAATTGATGGTACAAGT
ACAGAAACCATGGGAATATATGATGCAGCAGAGCGCTTGCAGGGACCTGAAGGAAGTTCA
GTGGAATTAACCATCCGTAGTGGACCTGAAGTAAAGAGCCTATCATTGATGCGAGAGAGA
GTTTCATTGAACCCAGTAAAGTCAAGACTATGCAAGATGCCTGGTTTAGGCAAGGATTCC
CCTAAGATTGGTTATATCAAACTAGCATCATTCAACCAGAATGCTTCTGGTGCTGTCAAG
GAAGCGATTGAATCTTTAAGGAGCAATGATGTGAATGCCTTTGTTTTGGACCTCCGAGAT
AATAGTGGTGGCCTTTTCCCAGAGGGAGTTGAGATTGCTAAGATTTGGTTGGAAAAAGGT
GTAATTGTGTATATTTGTGATGGTCGTGGTATTCGTGATATATATGACACAGATGGAAGC
AGTGTAGTAGCAGCTTCAGAACCTCTGGCTGTGCTGGTGAACAAAGGAACTGCAAGTGCT
AGTGAAATATTAGCTGGAGCATTGAAAGACAATAAACGTGCAGTGTTGTTTGGAGAACCC
ACATTTGGAAAAGGCAAGATCCAGTCGGTTTTTGAGCTATCAGATGGTTCGGGCTTGGCC
GTTACAGTAGCTCGTTATGAGACACCTGCTCACATTGATATTGACAAGGTTGGCATCGCT
CCAGACCATCCTCTTCCAACTCCATTTCCCAAGGATGCTGAGGGTTTTTGTGGCTGCCTC
ATGGACCCTACTTCTGCTTGCTATCTCAACAGGGTTCAGCTTTTTTCAAGATGA

Peptide Sequence

PEP ID

VIT_05s0077g00060.t01
PEP Infomation

pep chromosome:12X:5_random:24864:46797:1 gene:VIT_05s0077g00060 transcript:VIT_05s0077g00060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEALGGFAAASLSPPPPHYSTILQTPPWKSLPQRIGQPRLWSPLLCISKNVSYGLRPKLR
KYTASLQKELNCSEKFKHHVSVHFVRLVVGVMLVMSVSVGVSRPPSWALTEENLLFLEAW
RTIDRAYVDKTFNGQSWFRYRENALRNEPMNTREETYIAIKKMLATLDDPFTRFLEPDKF
KSLRSGTQGALTGVGLSIGYPTGFDGSPAGLLVISASPGGPASRAGILSGDVILTIDGTS
TETMGIYDAAERLQGPEGSSVELTIRSGPEVKSLSLMRERVSLNPVKSRLCKMPGLGKDS
PKIGYIKLASFNQNASGAVKEAIESLRSNDVNAFVLDLRDNSGGLFPEGVEIAKIWLEKG
VIVYICDGRGIRDIYDTDGSSVVAASEPLAVLVNKGTASASEILAGALKDNKRAVLFGEP
TFGKGKIQSVFELSDGSGLAVTVARYETPAHIDIDKVGIAPDHPLPTPFPKDAEGFCGCL
MDPTSACYLNRVQLFSR

Transcript Sequence

Transcript ID

VIT_05s0077g00060.t01
Transcript Infomation

cdna chromosome:12X:5_random:24864:46797:1 gene:VIT_05s0077g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTTGCCATGTGAATGGAGGCACTTGGAGGCTTCGCTGCTGCGTCTCTTTCTCCTCCACC
TCCCCATTATTCCACCATTCTTCAGACTCCACCATGGAAATCTCTGCCGCAAAGAATTGG
ACAGCCTCGACTGTGGAGTCCCTTGTTGTGTATAAGCAAAAATGTAAGTTATGGATTGCG
TCCTAAATTGAGGAAATATACTGCCAGTCTTCAGAAAGAATTAAATTGTTCAGAAAAGTT
TAAGCATCACGTCTCTGTTCATTTTGTGCGATTGGTTGTTGGAGTGATGCTGGTTATGTC
AGTTTCTGTTGGCGTTAGTAGGCCACCCTCCTGGGCCCTCACTGAAGAAAATCTCCTTTT
CTTAGAGGCATGGAGGACAATTGACCGTGCATATGTTGACAAAACATTTAATGGTCAAAG
TTGGTTTCGCTACAGAGAAAATGCACTGCGTAATGAACCAATGAACACACGAGAAGAGAC
ATATATCGCAATAAAGAAGATGCTTGCCACACTTGATGATCCTTTCACACGCTTTCTGGA
GCCTGACAAGTTTAAGAGTTTGCGGTCTGGAACTCAAGGTGCTCTTACAGGTGTAGGGTT
GTCAATTGGATACCCTACTGGATTTGATGGATCACCTGCTGGGCTTCTTGTTATTTCAGC
TTCTCCAGGAGGTCCTGCAAGTAGAGCTGGCATTTTGTCTGGGGATGTTATCCTTACAAT
TGATGGTACAAGTACAGAAACCATGGGAATATATGATGCAGCAGAGCGCTTGCAGGGACC
TGAAGGAAGTTCAGTGGAATTAACCATCCGTAGTGGACCTGAAGTAAAGAGCCTATCATT
GATGCGAGAGAGAGTTTCATTGAACCCAGTAAAGTCAAGACTATGCAAGATGCCTGGTTT
AGGCAAGGATTCCCCTAAGATTGGTTATATCAAACTAGCATCATTCAACCAGAATGCTTC
TGGTGCTGTCAAGGAAGCGATTGAATCTTTAAGGAGCAATGATGTGAATGCCTTTGTTTT
GGACCTCCGAGATAATAGTGGTGGCCTTTTCCCAGAGGGAGTTGAGATTGCTAAGATTTG
GTTGGAAAAAGGTGTAATTGTGTATATTTGTGATGGTCGTGGTATTCGTGATATATATGA
CACAGATGGAAGCAGTGTAGTAGCAGCTTCAGAACCTCTGGCTGTGCTGGTGAACAAAGG
AACTGCAAGTGCTAGTGAAATATTAGCTGGAGCATTGAAAGACAATAAACGTGCAGTGTT
GTTTGGAGAACCCACATTTGGAAAAGGCAAGATCCAGTCGGTTTTTGAGCTATCAGATGG
TTCGGGCTTGGCCGTTACAGTAGCTCGTTATGAGACACCTGCTCACATTGATATTGACAA
GGTTGGCATCGCTCCAGACCATCCTCTTCCAACTCCATTTCCCAAGGATGCTGAGGGTTT
TTGTGGCTGCCTCATGGACCCTACTTCTGCTTGCTATCTCAACAGGGTTCAGCTTTTTTC
AAGATGACAGAATCCTCAGTTGTGACTTACCATTCATTTTTTGGGCTCATTGTTTCCATT
AAGTGTACATTTTCACCCACAAATGTTTGAGAAGATTTTGGAAAAAGAAAGGA