Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0062g01120.t01
CDS Infomation

cds chromosome:12X:5:19783607:19785843:1 gene:VIT_05s0062g01120 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:D7U9N0]
Sequence

ATGATTAGCATCAAGGATCTGTATGGTGTTCTAAGTGCGGTGGTTCCTCTCTATGTGACT
ATGTTTTTGGCTTATGCTTCTGTAAAATGGTGGAACGTGTTCTCTCCGGATCAATGCGCA
GGCATCAACAGATTCGTGGCCATTTTCGCCATCCCACTTCTCTCCTTTGAGGTTATTTCA
AGGATAAATCCTTACAAGATGGACTTCCTCTTCATTGCTGCTGATGGAGTCTCCAAAGTT
CTAATCCTAATCATCTTGTTTTCTTGGGCTAAGTTCTCAAAGCGAGGCAGCCTTGACTGG
ACAATCACGCTTTTCTCCATTTCCACCCTCCCAAACACCCTTGTGATGGGGATCCCACTT
CTGAAATCCATGTACGGAGACGATAAGGAGTACCTCATTATCCAAGCCGTGGTTCTACAG
TGCATAATTTGGTACACTTTGTTACTCTTTCTGTTTGAGTATAGAGAAGCAAGGATTTTC
ATACTGAACAAGTTCAAGGACAGTAGTGTGAGTAACAGTGAGAGGAGCGGGGAGAATTTC
GGAGGAATCCAGGAGATGATCGGGAGAAACTGCGGCGGCACCGGCGCCGGCGAAGACGAA
GTAGTTGATGTGGTGGTTAGAACGCCTTCCAATCCTCAGACCACGCAGAATGTAAACAAG
GTGGCTCCAGATTCTCGGTCATGTTTGAAACCAACGCCGGCAGGAGGCGCCGCGCAGGAA
GACGGTAAAGAGGTCCATCTGTTCATTTGGCGATGCGGGTGTTGCAGTTCTCAAGGTGTT
TGTGGGCAGTCAGTGCAAGTCTGCAGAAGAGAAGAGGAAATCAAAGTCCAAGGGAAGACA
GGAGAAGATGAGAAGCCCAATTTCCTTAAAGATCAGAATATGGATTCCTCCACATCCTCA
GCCATGTTGAAGCAAATCATGAAAAGGGTGTGGTTTAAGCTTGTGAGGAACCCCAACTCT
TATGCCAGCGTACTGGGTTTAGCCTGGGCTTTGGCTTCCTGCAGATGGGACATAAAGAAG
CCCCAAATCTTGGAGAACTCGGTCACAATACTGTCAAATGCAGGCCTTGGGATGGCCATG
TTTAGCCTTGGTCTGTTCATGGCTCTCCAATCAAGGATCATAGCATGTGGGAATAGACTA
GCCGCGTATGGCATGCTTGTCAGGTTCTTGGCTGGCCCTGCTGTGATGGCAGTTGCTTCT
GTTGCAGTAGGTCTTAGGGGCACCGTGTTGCGGGTCTCCATTGTACAAGCCGCTCTGCCG
CAAGGCATAGTTCCCTTTGTGTTTTCCAGGGAATACAACCTGCATCCAGAAATGCTAAGC
ACAGCGGTAATTTTTGGAATGATTGTCGCCCTTCCCATCACAATTCTGTACTATGTTCTC
CTGGGACTGTAA

Peptide Sequence

PEP ID

VIT_05s0062g01120.t01
PEP Infomation

pep chromosome:12X:5:19783607:19785843:1 gene:VIT_05s0062g01120 transcript:VIT_05s0062g01120.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:D7U9N0]
Sequence

MISIKDLYGVLSAVVPLYVTMFLAYASVKWWNVFSPDQCAGINRFVAIFAIPLLSFEVIS
RINPYKMDFLFIAADGVSKVLILIILFSWAKFSKRGSLDWTITLFSISTLPNTLVMGIPL
LKSMYGDDKEYLIIQAVVLQCIIWYTLLLFLFEYREARIFILNKFKDSSVSNSERSGENF
GGIQEMIGRNCGGTGAGEDEVVDVVVRTPSNPQTTQNVNKVAPDSRSCLKPTPAGGAAQE
DGKEVHLFIWRCGCCSSQGVCGQSVQVCRREEEIKVQGKTGEDEKPNFLKDQNMDSSTSS
AMLKQIMKRVWFKLVRNPNSYASVLGLAWALASCRWDIKKPQILENSVTILSNAGLGMAM
FSLGLFMALQSRIIACGNRLAAYGMLVRFLAGPAVMAVASVAVGLRGTVLRVSIVQAALP
QGIVPFVFSREYNLHPEMLSTAVIFGMIVALPITILYYVLLGL

Transcript Sequence

Transcript ID

VIT_05s0062g01120.t01
Transcript Infomation

cdna chromosome:12X:5:19783607:19785843:1 gene:VIT_05s0062g01120 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:D7U9N0]
Sequence

GGTCATACTTCCCTTTTGAATCACTGCAAGCCAAGGTAGCAGAGAGGAAAAGGGATAGGC
AAAAACCAAGAAAAAGTGAGCAATGATTAGCATCAAGGATCTGTATGGTGTTCTAAGTGC
GGTGGTTCCTCTCTATGTGACTATGTTTTTGGCTTATGCTTCTGTAAAATGGTGGAACGT
GTTCTCTCCGGATCAATGCGCAGGCATCAACAGATTCGTGGCCATTTTCGCCATCCCACT
TCTCTCCTTTGAGGTTATTTCAAGGATAAATCCTTACAAGATGGACTTCCTCTTCATTGC
TGCTGATGGAGTCTCCAAAGTTCTAATCCTAATCATCTTGTTTTCTTGGGCTAAGTTCTC
AAAGCGAGGCAGCCTTGACTGGACAATCACGCTTTTCTCCATTTCCACCCTCCCAAACAC
CCTTGTGATGGGGATCCCACTTCTGAAATCCATGTACGGAGACGATAAGGAGTACCTCAT
TATCCAAGCCGTGGTTCTACAGTGCATAATTTGGTACACTTTGTTACTCTTTCTGTTTGA
GTATAGAGAAGCAAGGATTTTCATACTGAACAAGTTCAAGGACAGTAGTGTGAGTAACAG
TGAGAGGAGCGGGGAGAATTTCGGAGGAATCCAGGAGATGATCGGGAGAAACTGCGGCGG
CACCGGCGCCGGCGAAGACGAAGTAGTTGATGTGGTGGTTAGAACGCCTTCCAATCCTCA
GACCACGCAGAATGTAAACAAGGTGGCTCCAGATTCTCGGTCATGTTTGAAACCAACGCC
GGCAGGAGGCGCCGCGCAGGAAGACGGTAAAGAGGTCCATCTGTTCATTTGGCGATGCGG
GTGTTGCAGTTCTCAAGGTGTTTGTGGGCAGTCAGTGCAAGTCTGCAGAAGAGAAGAGGA
AATCAAAGTCCAAGGGAAGACAGGAGAAGATGAGAAGCCCAATTTCCTTAAAGATCAGAA
TATGGATTCCTCCACATCCTCAGCCATGTTGAAGCAAATCATGAAAAGGGTGTGGTTTAA
GCTTGTGAGGAACCCCAACTCTTATGCCAGCGTACTGGGTTTAGCCTGGGCTTTGGCTTC
CTGCAGATGGGACATAAAGAAGCCCCAAATCTTGGAGAACTCGGTCACAATACTGTCAAA
TGCAGGCCTTGGGATGGCCATGTTTAGCCTTGGTCTGTTCATGGCTCTCCAATCAAGGAT
CATAGCATGTGGGAATAGACTAGCCGCGTATGGCATGCTTGTCAGGTTCTTGGCTGGCCC
TGCTGTGATGGCAGTTGCTTCTGTTGCAGTAGGTCTTAGGGGCACCGTGTTGCGGGTCTC
CATTGTACAAGCCGCTCTGCCGCAAGGCATAGTTCCCTTTGTGTTTTCCAGGGAATACAA
CCTGCATCCAGAAATGCTAAGCACAGCGGTAATTTTTGGAATGATTGTCGCCCTTCCCAT
CACAATTCTGTACTATGTTCTCCTGGGACTGTAATACGACTGAGTACGTACTCCTGCACC
AAACCTGGAAAAGGATCAAGCATGGGAAACTTAGCCATCCTGGTGATTGATCAATCCACA
ATATGCATCTTATGTATCATTGTCAAGTGTGTTCATCACAGCTTTTGGACAGCTAATTAA
CCAGTAATGCACACCACAGACATCACAATTATTGATGGTCTCAATTCAATGCTTGCTAGG
AGAGAAACCCCACTTCTTAATATGATCAGCAGATTGGTTTTTAGTTTGTACTACTTTTCC
TTTTCCCCCTATTTTCAAAGGGGATTATATTGTTCTAGTGTGTGTGAGAGAGGGAAAGGA
GCATATGTATTTTATTTTATTTTTTGCTGTGATTTGAAATAGAATTAGTTAAAACCCAGA
TTGTTCTGACC