Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_05s0051g00590.t01
CDS Infomation	cds chromosome:12X:5:11375744:11380850:-1 gene:VIT_05s0051g00590 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TS74]
Sequence	ATGGCGGGTTCCAAGGGGTGGACTTCCCTCTGCTCACTCCTGCTTTTTTTCCTCTTCGTC GCTGTGATGGCCAATGACCGAAATGGAGGAACAGAGCAGTTGCAGAGCTCAAACAACTCA TCAATGGCTGCCAGGAATGAGCATGCAGTTGATGACCCAGATGCAGTGGCTTCAATGGTG GACATGAGCATTCGGAACAGCACAGAGAGAAGGAAATTAGGTTATTTCTCGTGTGGAACT GGTAATCCCATTGATGACTGCTGGCGATGTGACCACAATTGGCAAAAGAACCGTAAGCGC CTTGCAGACTGCGGCATTGGCTTTGGGCGAAATGCAATTGGGGGCCGTGATGGACGCTTC TATGTGGTCACTGACCCTGGTGATGATGATCCTGTCAACCCCAAGCCTGGCACTCTGCGC CATGCTGTCATCCAGGATGCTCCTCTCTGGATTGTGTTCAAGCGAGACATGGTGATCACA CTGAAGCAGGAGCTCATCATGAACAGCTTCAAAACAATAGATGGGCGTGGGGTCAATGTC CACATTGCTAATGGAGCATGCATCACCGTCCAATTTGTCACGAATGTTATAATTCATGGT CTTCACATCCATGACTGCAAGCCCACTGGGAATGCCATGGTGAGGAGCTCACCAAGTCAC TTTGGGTGGAGGACAATGGCCGATGGCGATGCCATTTCGATTTTTGGTTCAAGCCATATA TGGGTCGATCACAATTCACTCTCTAGCTGTGCTGATGGCCTCGTTGATGCTGTCATGGGC TCGACTGCCATTACCATTTCCAACAACCACTTTGCCCACCACAATGAGGTGATGCTGTTG GGCCACAGTGATTCTTATGAAAGAGACAAGCAAATGCAAGTGACAATTGCCTATAACCAT TTTGGAGAGGGTCTGATCCAGAGGATGCCAAGGTGCAGACATGGATATTTCCATGTGGTC AACAATGACTACACTCACTGGGAAATGTATGCTATTGGTGGAAGTGCAAGCCCCACCATC AACAGCCAGGGCAACAGATATCTTGCACCAGTCAATCCTTTTGCAAAAGAGGTGACAAAA AGGGTAGACACGCCTTCAGGCCAGTGGAAGGGTTGGAATTGGAGGTCAGAAGGAGACCTG CTGTTGAATGGAGCCTACTTCACCCCATCTGGTGCCGGTGCCTCAGCCAGCTATGCTAGA GCTTCAAGCTTGGGAGCCAAGTCCTCTTCCATGGTTGGCTCCATTACTTCCAATGCTGGT GCTCTCTCCTGCCGCAGGGGTTCCCAGTGCTAG

Peptide Sequence

PEP ID	VIT_05s0051g00590.t01
PEP Infomation	pep chromosome:12X:5:11375744:11380850:-1 gene:VIT_05s0051g00590 transcript:VIT_05s0051g00590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TS74]
Sequence	MAGSKGWTSLCSLLLFFLFVAVMANDRNGGTEQLQSSNNSSMAARNEHAVDDPDAVASMV DMSIRNSTERRKLGYFSCGTGNPIDDCWRCDHNWQKNRKRLADCGIGFGRNAIGGRDGRF YVVTDPGDDDPVNPKPGTLRHAVIQDAPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNV HIANGACITVQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAISIFGSSHI WVDHNSLSSCADGLVDAVMGSTAITISNNHFAHHNEVMLLGHSDSYERDKQMQVTIAYNH FGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAPVNPFAKEVTK RVDTPSGQWKGWNWRSEGDLLLNGAYFTPSGAGASASYARASSLGAKSSSMVGSITSNAG ALSCRRGSQC

Transcript Sequence

Transcript ID	VIT_05s0051g00590.t01
Transcript Infomation	cdna chromosome:12X:5:11375744:11380850:-1 gene:VIT_05s0051g00590 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TS74]
Sequence	CCTAAACCTTTTTTCTACTTGTCACCCATATCTTCTTCTTCAGTTAGATCCGTCTAGAGA GAGAGCTTTCGACCCAATGCCAATGGCGGGTTCCAAGGGGTGGACTTCCCTCTGCTCACT CCTGCTTTTTTTCCTCTTCGTCGCTGTGATGGCCAATGACCGAAATGGAGGAACAGAGCA GTTGCAGAGCTCAAACAACTCATCAATGGCTGCCAGGAATGAGCATGCAGTTGATGACCC AGATGCAGTGGCTTCAATGGTGGACATGAGCATTCGGAACAGCACAGAGAGAAGGAAATT AGGTTATTTCTCGTGTGGAACTGGTAATCCCATTGATGACTGCTGGCGATGTGACCACAA TTGGCAAAAGAACCGTAAGCGCCTTGCAGACTGCGGCATTGGCTTTGGGCGAAATGCAAT TGGGGGCCGTGATGGACGCTTCTATGTGGTCACTGACCCTGGTGATGATGATCCTGTCAA CCCCAAGCCTGGCACTCTGCGCCATGCTGTCATCCAGGATGCTCCTCTCTGGATTGTGTT CAAGCGAGACATGGTGATCACACTGAAGCAGGAGCTCATCATGAACAGCTTCAAAACAAT AGATGGGCGTGGGGTCAATGTCCACATTGCTAATGGAGCATGCATCACCGTCCAATTTGT CACGAATGTTATAATTCATGGTCTTCACATCCATGACTGCAAGCCCACTGGGAATGCCAT GGTGAGGAGCTCACCAAGTCACTTTGGGTGGAGGACAATGGCCGATGGCGATGCCATTTC GATTTTTGGTTCAAGCCATATATGGGTCGATCACAATTCACTCTCTAGCTGTGCTGATGG CCTCGTTGATGCTGTCATGGGCTCGACTGCCATTACCATTTCCAACAACCACTTTGCCCA CCACAATGAGGTGATGCTGTTGGGCCACAGTGATTCTTATGAAAGAGACAAGCAAATGCA AGTGACAATTGCCTATAACCATTTTGGAGAGGGTCTGATCCAGAGGATGCCAAGGTGCAG ACATGGATATTTCCATGTGGTCAACAATGACTACACTCACTGGGAAATGTATGCTATTGG TGGAAGTGCAAGCCCCACCATCAACAGCCAGGGCAACAGATATCTTGCACCAGTCAATCC TTTTGCAAAAGAGGTGACAAAAAGGGTAGACACGCCTTCAGGCCAGTGGAAGGGTTGGAA TTGGAGGTCAGAAGGAGACCTGCTGTTGAATGGAGCCTACTTCACCCCATCTGGTGCCGG TGCCTCAGCCAGCTATGCTAGAGCTTCAAGCTTGGGAGCCAAGTCCTCTTCCATGGTTGG CTCCATTACTTCCAATGCTGGTGCTCTCTCCTGCCGCAGGGGTTCCCAGTGCTAGTAAAT CTCAGTTAATTGAATGGGGAAAAAGATGCCTAGAAAAAAAAAGAAGAAAGGGTCATTTTT TTTCCCCTCTTAGATATCCATTTTTACTACCATATAGCATTATCCAATATCCGTATTCAG GCGATTTGTTACTTCCCTATCTATCCTATCATCATGATTTGGGCAAGTGTACATTTTTTA CACATGTCATCAAATTGTCAAACCCTGGTGTTCACTTATTCCACTCGGTGTGTCTGTGAT TGCGCAACCTCCCCCTGCTTCAACCCAAGAAAACAGTGCCATTGTCGGAGCAGGTGCGGT AGCGTTGTTCATTTCTATTTTCTCGTCTTTTGTGTCTTTCCTAGCTTCTTCCAATCAATC ACCTCTCTTCACCATCCACTCCCTCATCATCCATTTCTCCCCCTCTGTCTCTGTTGCTAC ATATTGGCTTGCCTTTTGGGGTTTATAGGAGCTAAATGATTTTGTGATTCTTTTTCCTTT TCTTTTACTTTTTCCTTTTCCCTTTTTTTTCCTATTTACTTTTGTTAGGTCATACAAGCA ATAGTGTATGAATGTCAAACTTGGTGTTATGAAAAAACTTTGTTACAGATGATGCATAGC AGGAAGGTCCTATATTTACTTTCTTTTCCTTTTTCTTCTTTTTGCTTTTTATTTTTGTCA ATGGGAGCCATCTTTTTCTTTCTTTTGGCGTGTAATTCTGGTCTTTCCACATGGATATAT ATACGTATACAACGCTGTTTGTGTTCCGCCTTTCCCTGCAGAATTTTGTGATGGTGGTTA TCGTTTTTCATGGGTATGGTACTCAAAAGGTTTTTTACTAGCCAATAGTTAATGGGAATG CTTTCGTACACTCAATGAGCGGTGCCCTCTTTGAGAGGAGGTTTCGGCGAAGGAGCGGAG CATGAATACACCACGCAAGGGTCTCTTGGGCAGTCAGTCCAATGAGGAAGTTGAATCACT TGTCTTTTTCTCAGCATTACATGCACATGCGCAAGACCGAGCCTAGAAATTGAGAGGAAA CTACCACAAAAGTTCCTACTTCACGCACACTATGGTGATCGCTGCAGATATTGGACTTGC ATTGCTTAATATATATGAAATTGTTAGTTGTGAAAGAATATGCTGAAATGAAATCATTGG CTAAAA