Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0051g00010.t01
CDS Infomation

cds chromosome:12X:5:10139019:10141541:1 gene:VIT_05s0051g00010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-amylase [Source:UniProtKB/TrEMBL;Acc:F6HS29]
Sequence

ATGGAGACGGAGGCGACACCGGCAGAGAGGGAATACAAGGAGGGGGGTGCAAAGGCTACG
GGGAAGGGGGTGCCGGTTTACGTGATGATACCTTTGGATAGCGTGACGATGGGGAATGGT
GTGAATACGTGGGAGAAGATGAAAGAGAGGATGCAGAAGCTGAAGAGCGCGGGTGTGGAG
GGGGTGATGATGGACGTGTGGTGGGGACTGGTGGAGAGGGAGGCCCCTGGCACCTATAAT
TGGGGTGGCTACGCGGAGCTCCTGGAGATGGTCAAGCAGCATGGGCTTAAAGTTCAGGCG
GTCATGTCCTTCCATAAATGTGGTGGAAACGTCGGTGACTCCTGCACGATCCCTTTACCT
AACTGGGTTGTGGAAGAGATCAACAAAGATCCGGACCTTGCATACACTGATCAATGGGGG
AGGAGAAATTATGAATATGTGTCCCTTGGGTCTGATACTCTTCTGGTCCTCAAGGGGCGA
ACACCCGTCCAGTGTTATGCTGACTTCATGCGTGCATTCAGAGACAATTTCAAGCATCTT
CTTGGTGACACCATTGAAATCCAAGTGGGGATGGGACCATCAGGTGAGCTCCGCTACCCT
TCATATCCAGAGCAAAATGGGACATGGAAATTCCCAGGCATTGGAGCATTCCAGTGTTAT
GACAAGTATATGCTCAGTAGCTTGAAAGCTGCTGCAGAAGCTGCTGGCAAACCAAAATGG
GGTAGCACCGGTCCCACAGATGCTGGCCACTACAACAACTGGCCAGAAGATACACAGTTT
TTCCGACGAGAAGGAGGGGGTTGGACCAGTCCTTATGGTGAATTCTTTCTTAACTGGTAT
TCTCAGATGCTTCTAGACCATGGTGAGAGAATACTGTCATCAGCCAAGTCCATCTTTCAG
GACATGGGAGTTAAGATCTCAGTCAAGGTTTCTGGTATTCACTGGCACTATGGGACACGG
TCCCACGCTCCAGAGCTCACGGCAGGGTACTATAACACACGGTTCCGAGATGGATACATT
CCTATTGCTCAAATGTTAGCACGCCATGGTGCCATACTCAACTTCACCTGCATAGAGATG
CGTGATCATGAGCAGCCACAGGATGCTCGTTGTGCACCCGAGAAGCTTGTGAGGCAACTG
GCTCTAGCAACTCGGAAAGCTCAAGTCCCACTTGCTGGGGAAAATGCATTGCCTCGATAT
GATGAGACTGCGCATGAGCAGATCTTGAGAGCATCATCCTTGAATTTTGACGGTGAAGAA
AGAGAGATGTGTGCTTTTACATACTTGAGAATGAATCCGGACCTATTCCAGGCAGACAAC
TGGAGAAGGTTTGTTGCATTTGTGAAAAAGATGAAGGAAGGGAAGAATGCACACTAG

Peptide Sequence

PEP ID

VIT_05s0051g00010.t01
PEP Infomation

pep chromosome:12X:5:10139019:10141541:1 gene:VIT_05s0051g00010 transcript:VIT_05s0051g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-amylase [Source:UniProtKB/TrEMBL;Acc:F6HS29]
Sequence

METEATPAEREYKEGGAKATGKGVPVYVMIPLDSVTMGNGVNTWEKMKERMQKLKSAGVE
GVMMDVWWGLVEREAPGTYNWGGYAELLEMVKQHGLKVQAVMSFHKCGGNVGDSCTIPLP
NWVVEEINKDPDLAYTDQWGRRNYEYVSLGSDTLLVLKGRTPVQCYADFMRAFRDNFKHL
LGDTIEIQVGMGPSGELRYPSYPEQNGTWKFPGIGAFQCYDKYMLSSLKAAAEAAGKPKW
GSTGPTDAGHYNNWPEDTQFFRREGGGWTSPYGEFFLNWYSQMLLDHGERILSSAKSIFQ
DMGVKISVKVSGIHWHYGTRSHAPELTAGYYNTRFRDGYIPIAQMLARHGAILNFTCIEM
RDHEQPQDARCAPEKLVRQLALATRKAQVPLAGENALPRYDETAHEQILRASSLNFDGEE
REMCAFTYLRMNPDLFQADNWRRFVAFVKKMKEGKNAH

Transcript Sequence

Transcript ID

VIT_05s0051g00010.t01
Transcript Infomation

cdna chromosome:12X:5:10139019:10141541:1 gene:VIT_05s0051g00010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-amylase [Source:UniProtKB/TrEMBL;Acc:F6HS29]
Sequence

GGAGGGAAGAGGGCGGATCTGTCAGTGGCGTGCCAGTCGTTCGCGATGGAGACGGAGGCG
ACACCGGCAGAGAGGGAATACAAGGAGGGGGGTGCAAAGGCTACGGGGAAGGGGGTGCCG
GTTTACGTGATGATACCTTTGGATAGCGTGACGATGGGGAATGGTGTGAATACGTGGGAG
AAGATGAAAGAGAGGATGCAGAAGCTGAAGAGCGCGGGTGTGGAGGGGGTGATGATGGAC
GTGTGGTGGGGACTGGTGGAGAGGGAGGCCCCTGGCACCTATAATTGGGGTGGCTACGCG
GAGCTCCTGGAGATGGTCAAGCAGCATGGGCTTAAAGTTCAGGCGGTCATGTCCTTCCAT
AAATGTGGTGGAAACGTCGGTGACTCCTGCACGATCCCTTTACCTAACTGGGTTGTGGAA
GAGATCAACAAAGATCCGGACCTTGCATACACTGATCAATGGGGGAGGAGAAATTATGAA
TATGTGTCCCTTGGGTCTGATACTCTTCTGGTCCTCAAGGGGCGAACACCCGTCCAGTGT
TATGCTGACTTCATGCGTGCATTCAGAGACAATTTCAAGCATCTTCTTGGTGACACCATT
GAAATCCAAGTGGGGATGGGACCATCAGGTGAGCTCCGCTACCCTTCATATCCAGAGCAA
AATGGGACATGGAAATTCCCAGGCATTGGAGCATTCCAGTGTTATGACAAGTATATGCTC
AGTAGCTTGAAAGCTGCTGCAGAAGCTGCTGGCAAACCAAAATGGGGTAGCACCGGTCCC
ACAGATGCTGGCCACTACAACAACTGGCCAGAAGATACACAGTTTTTCCGACGAGAAGGA
GGGGGTTGGACCAGTCCTTATGGTGAATTCTTTCTTAACTGGTATTCTCAGATGCTTCTA
GACCATGGTGAGAGAATACTGTCATCAGCCAAGTCCATCTTTCAGGACATGGGAGTTAAG
ATCTCAGTCAAGGTTTCTGGTATTCACTGGCACTATGGGACACGGTCCCACGCTCCAGAG
CTCACGGCAGGGTACTATAACACACGGTTCCGAGATGGATACATTCCTATTGCTCAAATG
TTAGCACGCCATGGTGCCATACTCAACTTCACCTGCATAGAGATGCGTGATCATGAGCAG
CCACAGGATGCTCGTTGTGCACCCGAGAAGCTTGTGAGGCAACTGGCTCTAGCAACTCGG
AAAGCTCAAGTCCCACTTGCTGGGGAAAATGCATTGCCTCGATATGATGAGACTGCGCAT
GAGCAGATCTTGAGAGCATCATCCTTGAATTTTGACGGTGAAGAAAGAGAGATGTGTGCT
TTTACATACTTGAGAATGAATCCGGACCTATTCCAGGCAGACAACTGGAGAAGGTTTGTT
GCATTTGTGAAAAAGATGAAGGAAGGGAAGAATGCACACTAGTGTCGGGAACAAGTGGAG
CAGGAAGCAGAGCACTTTGT