Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0049g02250.t01
CDS Infomation

cds chromosome:12X:5:9854148:9856398:-1 gene:VIT_05s0049g02250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGAAGAAACAAAAACCCATCAGTCAATCGGATCCTGATTCTGATCTGAAATCTGTT
ATTCATCAGCATTCCTTGTTTTTTGACAAGTTAATTGAGCTAATCCCCGCAAGATTTTAT
CTCCCCAGTGACAATACAGATAAGCCATGGTTTCAGGGCCTAAGCAAGGCTGCAAAAGCT
TCAGCAAAGAAACAATCAAAAGAAAATATTAAGAAAGCTCGAAGAGATCGGTTAGATCCA
GAGAAATCATCTACGACACTAGATTTGTTAAACCAAAGCTTACGAAATGAGGAATTGGAC
AGTGAGAGTGATGGTGAAGCAGATATTAAACCAATGATTTCTGGTCTAGAAAATGATGAA
CGATCAGTGACTTATGAAGAACTACGGCAAAGACTTCATCGCCGAATTGAGGAGTTACAG
TCAGGTCGAAAGAAAAATAGTGGGGATTTAGATGAAGCAAAGAAGGCTGAGAAGAGAGAT
GAGAGAAAGAAGAAAGAAACAGGAGGAAATTTTCAGGAAAGGAAGCGCAAGAGAGACCCT
GGATCCGAAGAAGATGATCAACTTAAGATCAGTGATTCAGCAGCTAAATTGACTGAGGAT
GCATCAGAGGCTTCAAAAGAACTCACATTTGGTCATGTGAAGATTGGGAACAAAGAAGAG
CTTGGAAAGAAGAAAAAGAGGAAGCTCTCAAAGTTGAAGGAGCTTGAGAAGGCAAAGAAA
TTGGAGGAGGAGAAGAAAGACCCAGAGAAAGGCAAGATTATTTCGAAGAAGCATTCATGG
CAAGCAGCAACAAGTAGAGCTGCAGGAATCAAGGTCCACGATGATCCGAAATTGTTGAAA
CAAAGCATACATAAGGGGAAGAAGAGGCACCAAAAGAATGTTGAGAAGTGGAAAGAAAGA
GTTGAAACTAGAGATAAAATGAGAGCACAGAAGCAGCAGACAAGATCAGAAAATATAGGT
GAGAGGATTCACCAGAAGAAGATGCGGCGGATCGCAAAGAGGGAGAAAAAGCTCATGCGA
CCAGGGTTTGAAGGTCGCAAAGAAGGTTTTATTACCAAAGATAAAGCTTAA

Peptide Sequence

PEP ID

VIT_05s0049g02250.t01
PEP Infomation

pep chromosome:12X:5:9854148:9856398:-1 gene:VIT_05s0049g02250 transcript:VIT_05s0049g02250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKKKQKPISQSDPDSDLKSVIHQHSLFFDKLIELIPARFYLPSDNTDKPWFQGLSKAAKA
SAKKQSKENIKKARRDRLDPEKSSTTLDLLNQSLRNEELDSESDGEADIKPMISGLENDE
RSVTYEELRQRLHRRIEELQSGRKKNSGDLDEAKKAEKRDERKKKETGGNFQERKRKRDP
GSEEDDQLKISDSAAKLTEDASEASKELTFGHVKIGNKEELGKKKKRKLSKLKELEKAKK
LEEEKKDPEKGKIISKKHSWQAATSRAAGIKVHDDPKLLKQSIHKGKKRHQKNVEKWKER
VETRDKMRAQKQQTRSENIGERIHQKKMRRIAKREKKLMRPGFEGRKEGFITKDKA

Transcript Sequence

Transcript ID

VIT_05s0049g02250.t01
Transcript Infomation

cdna chromosome:12X:5:9854148:9856398:-1 gene:VIT_05s0049g02250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTAGGGAAAGAGGGGAAGAGTAGGTTTAAAAAGTTGCAGAGGTCGGTCGTGGCGCCTCTC
GAAATCATCTACGGCCACCATCTCTCCGACGCCACCTCTTGCCGCCACCTCCGTTCATCT
TCTTTCTTCATCGTAGTCTAAACTTCGGGAGATGAAGAAGAAACAAAAACCCATCAGTCA
ATCGGATCCTGATTCTGATCTGAAATCTGTTATTCATCAGCATTCCTTGTTTTTTGACAA
GTTAATTGAGCTAATCCCCGCAAGATTTTATCTCCCCAGTGACAATACAGATAAGCCATG
GTTTCAGGGCCTAAGCAAGGCTGCAAAAGCTTCAGCAAAGAAACAATCAAAAGAAAATAT
TAAGAAAGCTCGAAGAGATCGGTTAGATCCAGAGAAATCATCTACGACACTAGATTTGTT
AAACCAAAGCTTACGAAATGAGGAATTGGACAGTGAGAGTGATGGTGAAGCAGATATTAA
ACCAATGATTTCTGGTCTAGAAAATGATGAACGATCAGTGACTTATGAAGAACTACGGCA
AAGACTTCATCGCCGAATTGAGGAGTTACAGTCAGGTCGAAAGAAAAATAGTGGGGATTT
AGATGAAGCAAAGAAGGCTGAGAAGAGAGATGAGAGAAAGAAGAAAGAAACAGGAGGAAA
TTTTCAGGAAAGGAAGCGCAAGAGAGACCCTGGATCCGAAGAAGATGATCAACTTAAGAT
CAGTGATTCAGCAGCTAAATTGACTGAGGATGCATCAGAGGCTTCAAAAGAACTCACATT
TGGTCATGTGAAGATTGGGAACAAAGAAGAGCTTGGAAAGAAGAAAAAGAGGAAGCTCTC
AAAGTTGAAGGAGCTTGAGAAGGCAAAGAAATTGGAGGAGGAGAAGAAAGACCCAGAGAA
AGGCAAGATTATTTCGAAGAAGCATTCATGGCAAGCAGCAACAAGTAGAGCTGCAGGAAT
CAAGGTCCACGATGATCCGAAATTGTTGAAACAAAGCATACATAAGGGGAAGAAGAGGCA
CCAAAAGAATGTTGAGAAGTGGAAAGAAAGAGTTGAAACTAGAGATAAAATGAGAGCACA
GAAGCAGCAGACAAGATCAGAAAATATAGGTGAGAGGATTCACCAGAAGAAGATGCGGCG
GATCGCAAAGAGGGAGAAAAAGCTCATGCGACCAGGGTTTGAAGGTCGCAAAGAAGGTTT
TATTACCAAAGATAAAGCTTAAGGTGCCTTCTTTGAAATTTAGCCGTGTTTGTCCTTTTC
TTTCAATAGATTGGCAGAAAGCAAAATATTAGAGGTCACCTGCTCCAGTTTTAGGAATTA
TGCTTTCAAAGAGCACCCCCACCTTTTCTTCTTTAAGTACTATATGGTTT