Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0049g02110.t01
CDS Infomation

cds chromosome:12X:5:9748729:9758624:1 gene:VIT_05s0049g02110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACAAGGTCACAGAAGCCGTGGAGAAGGCGAAGAAGGATTGGGAAGAGACGTATGGA
AAAACCCTAGATCACATAAAGGCAATTGAGGATTATGGAAAATCATCCGATCAGAAGAAC
TCACTTCCTAGATTGAATGGCCTTGCTCAAGACGGTTTGGCTTTGCTCTCATCGTTGCAG
TTCAATCTTGATCTTCTCGCTCCACAGCTGCCCACTGATGAAGACATTCAATCTGCTAAC
ACCACACTTCAATCTTGGAAGAATCAAATTCAAAGTTTGCGTTCGAGTTTGAGGAATGCG
AATTTACAAGCAAAAGCAAACATGAGGAAAGCAGCTAAGGAAGAGAGGGAACTTCTTCTG
GGGGCTGGAGGAGAGTCCACGATTCGCAGACGCAATTTACAGACAAAGACTGGAATGACA
TCTGCTGCTGAAAATATCACAGAGAGCCTTCGCCGAACTCGCCAGCTTATGGTTCAGGAG
GTCGAAAGAAACACAACCATGCTCTTGACTAATGAGGAGTCAACAGGAGTATTAAAAAAG
GCTGAAAGTGAATATAAGGGACACCGCTCACTGCTCATGCGAACCAGAAACCTACTAACA
ACAATGCAACGTCAAGATGTCCTTGACAGGATCATCCTCATTGTTGGCTTTGTCTTCTTC
TCTTGTGCTGTTCTCTACGTTGTTTCAAAGCGTATTGGCCTACTCAAGTTGCAAAGAACG
GTTACTGCTGCAATAAAGGCTGGGATGGTGAGACAAGCAAACATTGGACAGGATGCTGCT
GAAGATGGCATAAATCTTGCTCCTGTCCATGACAACGCAATTCGCAGAGTAGAGGTGCCA
TTGGAACAACATATGCACGATGAACTTTGA

Peptide Sequence

PEP ID

VIT_05s0049g02110.t01
PEP Infomation

pep chromosome:12X:5:9748729:9758624:1 gene:VIT_05s0049g02110 transcript:VIT_05s0049g02110.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDKVTEAVEKAKKDWEETYGKTLDHIKAIEDYGKSSDQKNSLPRLNGLAQDGLALLSSLQ
FNLDLLAPQLPTDEDIQSANTTLQSWKNQIQSLRSSLRNANLQAKANMRKAAKEERELLL
GAGGESTIRRRNLQTKTGMTSAAENITESLRRTRQLMVQEVERNTTMLLTNEESTGVLKK
AESEYKGHRSLLMRTRNLLTTMQRQDVLDRIILIVGFVFFSCAVLYVVSKRIGLLKLQRT
VTAAIKAGMVRQANIGQDAAEDGINLAPVHDNAIRRVEVPLEQHMHDEL

Transcript Sequence

Transcript ID

VIT_05s0049g02110.t01
Transcript Infomation

cdna chromosome:12X:5:9748729:9758624:1 gene:VIT_05s0049g02110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGCTTTTACCTCAAAGTATCTGAAATGGACAAGGTCACAGAAGCCGTGGAGAAGGCGAAG
AAGGATTGGGAAGAGACGTATGGAAAAACCCTAGATCACATAAAGGCAATTGAGGATTAT
GGAAAATCATCCGATCAGAAGAACTCACTTCCTAGATTGAATGGCCTTGCTCAAGACGGT
TTGGCTTTGCTCTCATCGTTGCAGTTCAATCTTGATCTTCTCGCTCCACAGCTGCCCACT
GATGAAGACATTCAATCTGCTAACACCACACTTCAATCTTGGAAGAATCAAATTCAAAGT
TTGCGTTCGAGTTTGAGGAATGCGAATTTACAAGCAAAAGCAAACATGAGGAAAGCAGCT
AAGGAAGAGAGGGAACTTCTTCTGGGGGCTGGAGGAGAGTCCACGATTCGCAGACGCAAT
TTACAGACAAAGACTGGAATGACATCTGCTGCTGAAAATATCACAGAGAGCCTTCGCCGA
ACTCGCCAGCTTATGGTTCAGGAGGTCGAAAGAAACACAACCATGCTCTTGACTAATGAG
GAGTCAACAGGAGTATTAAAAAAGGCTGAAAGTGAATATAAGGGACACCGCTCACTGCTC
ATGCGAACCAGAAACCTACTAACAACAATGCAACGTCAAGATGTCCTTGACAGGATCATC
CTCATTGTTGGCTTTGTCTTCTTCTCTTGTGCTGTTCTCTACGTTGTTTCAAAGCGTATT
GGCCTACTCAAGTTGCAAAGAACGGTTACTGCTGCAATAAAGGCTGGGATGGTGAGACAA
GCAAACATTGGACAGGATGCTGCTGAAGATGGCATAAATCTTGCTCCTGTCCATGACAAC
GCAATTCGCAGAGTAGAGGTGCCATTGGAACAACATATGCACGATGAACTTTGAGGTTAT
TACAGCTTTGTTGCTTCACATTTTCCTTTTGTATATAGAGTAGCTTCCCAAACTCAAATT
CCTTGGTTTTTTTTTGTGCCATTGATTTTCATGAGCCATGTTGTCAAGTTAAGAGATAAT
ATCATG