Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0049g01980.t01
CDS Infomation

cds chromosome:12X:5:9466679:9475214:-1 gene:VIT_05s0049g01980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCCTCTGCTATTGCCTCCAACTCTCCTGCTTTCATCAAGAAAGATGTGGATCTC
TCTGCATTTTCATCATCGGCATCATCATTTTCCATTCAGAAAACCAATAAAAGAAATTCC
CGGAAAATTGTTTCAGTCATGGCACCCCAACAATCGCCACGTTCTCCTTCCACCTCTGGT
TCAGTAAAGACTGCAATGACCATGACCGAGAAGATCTTGGCCAGGGCTTCTGAAAAACCC
CAGCTGAGCCCAGGTGAGAATGTATGGGTAAATGTTGATCTCTTGATGACCCATGATGTC
TGTGGCCCAGGTTCTTTTGGAATCTTCAAGAAAGAGTTTGGTGAGAATGCAAAGGTTTGG
GACCGTGAAAAGATTGTTATTATACCTGAACACTACATCTTCACAAAGGATGAACGGGCA
AATCGTAATGTTGATATCCTGAGGGAATTTTGCACAGAGCAAAATATCAAGTACTTCTAT
GACATAAAAGATCTTGGTAATTTCAGGGCCAATCCGGATTACAAAGGTGTATGCCATGTT
GCCCTTGCCCAAGAAGGTCATTGCAGGCCTGGAGAGGTCCTCTTAGGTACTGACTCCCAC
ACATGTACTGCTGGGGCATTTGGCCAGTTCGCTACTGGAATAGGTAACACTGATGCTGCT
TTCGTATTAGGCACTGGAAAGATCCTGCTGAAGGTGCCTCCAACTTTGAGATTTGTAATG
GATGGAGAAATGCCCAATTATTTGCTCGCAAAAGATTTGATTTTGCAAATTATTGGTGAA
ATATCTGTTTCTGGCGCGACATATAAATCTATGGAATTTGTTGGCACTACTGTTGAAAGT
TTAACTATGGAAGAAAGAATGACATTATGCAACATGGTTATTGAAGCTGGGGGAAAGAAT
GGTGTTGTCCCTGCTGATAGTACTACACATAAGTACCTTGAGGATAAGACAAGTTTGCCA
TATGAACCAGTTTATAGTGATGAGCAAGCAAGATTTCTTTCTGAGTACAGATTTGATATC
TCAAAACTGGAACCTCTGGTGGCAAAGCCTCATTCACCTGATAAATGTGCTTTGGCAAGA
GAATGCAAAGACGTGAAAATTGACAGGGTGTATATTGGATCTTGTACTGGTGGAAAAACT
GAGGATTTTCTAGCTGCAGCCAAAGTTTTTCATGCTTCAGGAAAGAAGGTCAAAGTTCCC
ACATTTCTTGTCCCTGCAACCCAAAAGGTTTGGATGGACGTATATAGTCTCCCGGTACCA
GGATGTGGTGGCAAGACTTGCTCTCAGATATTTGAGGAAGCTGGTTGTGATACACCTGCA
AGTCCTACCTGTGGTGCTTGTATGGGTGGTCCTAGAGACACATATGCACGCATGAATGAA
CCTCAGGTATGTGTGTCTACAACAAATAGGAACTTCCCTGGGCGAATGGGGCACAAAGAA
AGCCAGATATATCTAGCTTCTCCTTACACAGCAGCAGCATCTGCTTTGAGGGGTTATGTC
ACTGATCCAAGAGAGTTCTTAATTTGA

Peptide Sequence

PEP ID

VIT_05s0049g01980.t01
PEP Infomation

pep chromosome:12X:5:9466679:9475214:-1 gene:VIT_05s0049g01980 transcript:VIT_05s0049g01980.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASSAIASNSPAFIKKDVDLSAFSSSASSFSIQKTNKRNSRKIVSVMAPQQSPRSPSTSG
SVKTAMTMTEKILARASEKPQLSPGENVWVNVDLLMTHDVCGPGSFGIFKKEFGENAKVW
DREKIVIIPEHYIFTKDERANRNVDILREFCTEQNIKYFYDIKDLGNFRANPDYKGVCHV
ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAAFVLGTGKILLKVPPTLRFVM
DGEMPNYLLAKDLILQIIGEISVSGATYKSMEFVGTTVESLTMEERMTLCNMVIEAGGKN
GVVPADSTTHKYLEDKTSLPYEPVYSDEQARFLSEYRFDISKLEPLVAKPHSPDKCALAR
ECKDVKIDRVYIGSCTGGKTEDFLAAAKVFHASGKKVKVPTFLVPATQKVWMDVYSLPVP
GCGGKTCSQIFEEAGCDTPASPTCGACMGGPRDTYARMNEPQVCVSTTNRNFPGRMGHKE
SQIYLASPYTAAASALRGYVTDPREFLI

Transcript Sequence

Transcript ID

VIT_05s0049g01980.t01
Transcript Infomation

cdna chromosome:12X:5:9466679:9475214:-1 gene:VIT_05s0049g01980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAATTAGGAGCAGGGTTCCTTCTCTTTCATGGCTTCCTCTGCTATTGCCTCCAACTCTCC
TGCTTTCATCAAGAAAGATGTGGATCTCTCTGCATTTTCATCATCGGCATCATCATTTTC
CATTCAGAAAACCAATAAAAGAAATTCCCGGAAAATTGTTTCAGTCATGGCACCCCAACA
ATCGCCACGTTCTCCTTCCACCTCTGGTTCAGTAAAGACTGCAATGACCATGACCGAGAA
GATCTTGGCCAGGGCTTCTGAAAAACCCCAGCTGAGCCCAGGTGAGAATGTATGGGTAAA
TGTTGATCTCTTGATGACCCATGATGTCTGTGGCCCAGGTTCTTTTGGAATCTTCAAGAA
AGAGTTTGGTGAGAATGCAAAGGTTTGGGACCGTGAAAAGATTGTTATTATACCTGAACA
CTACATCTTCACAAAGGATGAACGGGCAAATCGTAATGTTGATATCCTGAGGGAATTTTG
CACAGAGCAAAATATCAAGTACTTCTATGACATAAAAGATCTTGGTAATTTCAGGGCCAA
TCCGGATTACAAAGGTGTATGCCATGTTGCCCTTGCCCAAGAAGGTCATTGCAGGCCTGG
AGAGGTCCTCTTAGGTACTGACTCCCACACATGTACTGCTGGGGCATTTGGCCAGTTCGC
TACTGGAATAGGTAACACTGATGCTGCTTTCGTATTAGGCACTGGAAAGATCCTGCTGAA
GGTGCCTCCAACTTTGAGATTTGTAATGGATGGAGAAATGCCCAATTATTTGCTCGCAAA
AGATTTGATTTTGCAAATTATTGGTGAAATATCTGTTTCTGGCGCGACATATAAATCTAT
GGAATTTGTTGGCACTACTGTTGAAAGTTTAACTATGGAAGAAAGAATGACATTATGCAA
CATGGTTATTGAAGCTGGGGGAAAGAATGGTGTTGTCCCTGCTGATAGTACTACACATAA
GTACCTTGAGGATAAGACAAGTTTGCCATATGAACCAGTTTATAGTGATGAGCAAGCAAG
ATTTCTTTCTGAGTACAGATTTGATATCTCAAAACTGGAACCTCTGGTGGCAAAGCCTCA
TTCACCTGATAAATGTGCTTTGGCAAGAGAATGCAAAGACGTGAAAATTGACAGGGTGTA
TATTGGATCTTGTACTGGTGGAAAAACTGAGGATTTTCTAGCTGCAGCCAAAGTTTTTCA
TGCTTCAGGAAAGAAGGTCAAAGTTCCCACATTTCTTGTCCCTGCAACCCAAAAGGTTTG
GATGGACGTATATAGTCTCCCGGTACCAGGATGTGGTGGCAAGACTTGCTCTCAGATATT
TGAGGAAGCTGGTTGTGATACACCTGCAAGTCCTACCTGTGGTGCTTGTATGGGTGGTCC
TAGAGACACATATGCACGCATGAATGAACCTCAGGTATGTGTGTCTACAACAAATAGGAA
CTTCCCTGGGCGAATGGGGCACAAAGAAAGCCAGATATATCTAGCTTCTCCTTACACAGC
AGCAGCATCTGCTTTGAGGGGTTATGTCACTGATCCAAGAGAGTTCTTAATTTGAACCTG
ATTCTAGGAGTCTTAAACCGCCATTCCACAACTCTCATGTGGATTGATTTATATTTTTGC
ATGTTGCCATTCTCATGGCTTCGTGTACTGAAATTCCTTTCAACTTGATTTCAAGTCCCT
GCTAGCTCTAAAGAGATGGTTTTTGGTTAGAATTATGAGGTGGACTTTCACTCTTA