Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0049g01850.t01
CDS Infomation

cds chromosome:12X:5:9307267:9318378:-1 gene:VIT_05s0049g01850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTACTTTAAGGACAAGCTTTCTCGTTTTTGGGACGATTCTTCGTCTTCTCCGTCTCAG
GCCAGGCCTAGTTCTAAGGGAGGAAGATCGTTGTCCTCATTGCTTTCCTTTGTTCTACCC
TCGGCAAGGTTTGATGGATTCAGATCAAACAAGCATCAACCTGATATTAGACCGATTAGA
TCACTTCCTGTTAGATGGAGTGGTAAAAATGGAAGGCATGATCCATTGGCTAGCCCTGCA
GATTATAGTCCAGTTTGTGAGAAAAAAGAAAATGGTGAGTCAATGTACAAGAACAAAGGA
ACACTTGATGCTCCTGAAGAAGATGAAGACCATGGTTCTGGAAGAAGCACTAGTAGTTCT
GACGTGTTTGAAGAAGCAACTGAGTTACATAGTTCAGAAAATCCTGCCCCCAATCTCACA
GACAACTCTTCATTTATCTCCTCAGATTTATATGAGTTCTTGTTATCATCCCTTCCTAAT
ATAGTTAAAGGGTGCCAATGGGTGCTTCTGTACAGTACGTTGAAACATGGTATATCACTC
CGCACACTTATTCGTAAGAGTGCTGACCTTTCTGGTCCTTGTTTGCTGATTGTCGGAGAC
ATGCAAGGTGCTGTGTTTGGGGGCCTGCTCGAGTGCCCCTTGAAGCCTACTGCAAAAAGA
AAATATCAAGGAACAAACCAAGCATTTGTATTCACGACCATATATGGTGAACCAAGATTA
TTTAGACCCACGGGTGCCAACCGATACTTTTATTTGTGTTTGAATGACTTGCTAGCACTT
GGTGGGGGTGGGAACTTTGCTTTGTGCTTGGACGAAGATTTGTTAAGTGGAACCAGTGGA
CCCTGTGAAACATTTGGGAATTTATGCTTGGCTCATAATCCAGAATTTGAATTGAAGAAT
GTAGAGCTATGGGGTTTCACACATTCATCACAATACCTGCTCTGA

Peptide Sequence

PEP ID

VIT_05s0049g01850.t01
PEP Infomation

pep chromosome:12X:5:9307267:9318378:-1 gene:VIT_05s0049g01850 transcript:VIT_05s0049g01850.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MYFKDKLSRFWDDSSSSPSQARPSSKGGRSLSSLLSFVLPSARFDGFRSNKHQPDIRPIR
SLPVRWSGKNGRHDPLASPADYSPVCEKKENGESMYKNKGTLDAPEEDEDHGSGRSTSSS
DVFEEATELHSSENPAPNLTDNSSFISSDLYEFLLSSLPNIVKGCQWVLLYSTLKHGISL
RTLIRKSADLSGPCLLIVGDMQGAVFGGLLECPLKPTAKRKYQGTNQAFVFTTIYGEPRL
FRPTGANRYFYLCLNDLLALGGGGNFALCLDEDLLSGTSGPCETFGNLCLAHNPEFELKN
VELWGFTHSSQYLL

Transcript Sequence

Transcript ID

VIT_05s0049g01850.t01
Transcript Infomation

cdna chromosome:12X:5:9307267:9318378:-1 gene:VIT_05s0049g01850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTTTCTCTCTCTTTTTCTTTTTCACGTACTAACCAGAACAACCTCATTTCTAACGTCTC
TCTTTCTCTCTCGCTTTTATATGGAATCTGACTTTTGATTTAGGGTTAGGGTTTGGGTAT
TGACAAGCACATTGCTCACAATCCTCGTCATGTACTTTAAGGACAAGCTTTCTCGTTTTT
GGGACGATTCTTCGTCTTCTCCGTCTCAGGCCAGGCCTAGTTCTAAGGGAGGAAGATCGT
TGTCCTCATTGCTTTCCTTTGTTCTACCCTCGGCAAGGTTTGATGGATTCAGATCAAACA
AGCATCAACCTGATATTAGACCGATTAGATCACTTCCTGTTAGATGGAGTGGTAAAAATG
GAAGGCATGATCCATTGGCTAGCCCTGCAGATTATAGTCCAGTTTGTGAGAAAAAAGAAA
ATGGTGAGTCAATGTACAAGAACAAAGGAACACTTGATGCTCCTGAAGAAGATGAAGACC
ATGGTTCTGGAAGAAGCACTAGTAGTTCTGACGTGTTTGAAGAAGCAACTGAGTTACATA
GTTCAGAAAATCCTGCCCCCAATCTCACAGACAACTCTTCATTTATCTCCTCAGATTTAT
ATGAGTTCTTGTTATCATCCCTTCCTAATATAGTTAAAGGGTGCCAATGGGTGCTTCTGT
ACAGTACGTTGAAACATGGTATATCACTCCGCACACTTATTCGTAAGAGTGCTGACCTTT
CTGGTCCTTGTTTGCTGATTGTCGGAGACATGCAAGGTGCTGTGTTTGGGGGCCTGCTCG
AGTGCCCCTTGAAGCCTACTGCAAAAAGAAAATATCAAGGAACAAACCAAGCATTTGTAT
TCACGACCATATATGGTGAACCAAGATTATTTAGACCCACGGGTGCCAACCGATACTTTT
ATTTGTGTTTGAATGACTTGCTAGCACTTGGTGGGGGTGGGAACTTTGCTTTGTGCTTGG
ACGAAGATTTGTTAAGTGGAACCAGTGGACCCTGTGAAACATTTGGGAATTTATGCTTGG
CTCATAATCCAGAATTTGAATTGAAGAATGTAGAGCTATGGGGTTTCACACATTCATCAC
AATACCTGCTCTGACACGAGATTGAGACGGTGTTTTCTTCCCAAGTTGTATCTCTGAAAA
TATTTATGGTCCTATTCTTTATTCTTTTCCTGTCCGGCTGCCCTCCGTTTTGGTCCAGGA
GGGCTCTGATTCTACATGTCATGACTTACCAACCACCCCCAGGCTCCCAATTTGTATGAT
CCATGTATGTCATAGCGTGTTGTCCATTTGAAGTTTGGGCTGTTTTATGGGCCATGAGGC
AGTTGAATATTTGGAAAAGAGAAAGATGAGTAAAGTCAAGACATTGAGTCGTTAACACAT
TACTTAATGTTTATGTATTGATGTACCTCTATTCTTTCAATATAATATAAGATCCATGGT
AATAT