Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0049g01650.t01
CDS Infomation

cds chromosome:12X:5:9095898:9110026:1 gene:VIT_05s0049g01650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAGCGGCGGTGATCGGCGCCGGAGTAAGCGGACTGGTGTCGGCGTATGTACTTGCC
AGAGCCGGCATGAAGGTGGTGTTGTACGAGAAGGAAGATTACTTGGGCGGCCATGCTAAG
ACTGTTACTGTCGACGGCGTCCCTCTGGACCTAGGCTTCATGGTCTTCAATCGGGTAACA
TATCCAAATATGATGGAGTTCTTTGAGACTCTTGGGGTAGATATGGAGCTATCAGACATG
TCCTTTGCAGTGAGCTTAGATGAAGGGCGAGGCTGCGAGTGGGGCAGCCGAAATGGTTTA
TCAAGTTTGTTTGCACAGAAGAAGAACATACTGAATCCATATTTTTGGCAAATGATTGGA
GATGTGATCAAGTTTAAGGATGATGTTCTCAAGTACCTTGAAGAGCTTGAGAACAACCCA
GACATGGATCGGAACCAGACCTTGGGCGACTTCATAAAGTGTCGTGGTTACTCAGAGTTA
TTCCAGAAGGCTTATCTTGTCCCGATATGTGCTTCAATCTGGTCCTGCCCGGCAGAAGGA
GTAATGACTTTCTCGGCCTTTTCAGTTCTTTCGTTTTGCCGCAACCACCATCTCCTGCAG
CTCTTTGGGCGCCCACAGTGGCTCACTGTCAAATGGCGCTCTCATTATTATGTTAATAAG
GTCAGAGAAGAGCTAGAAAGTAAAGGTTGTCAAATAAGAACTGGTTGTGAGGTTGTCTCT
GTTTCAACTACAGATGATGGTTGCACTGTATTTTGTGGAGATGGGTCACAAGAAATGCAC
GATGGGTGCATAATGGCTGTCCATGCCCCTGATGCCTTGAACATATTAGGAAACAAGGCA
ACATTTGATGAAATGAGAGTACTCGGTGCCTTCCAATATGTCTCTAGTGATATTTTCCTT
CATTGTGACAAAAATTTCATGCCCCAAAACCCAGCAGCATGGAGTGCTTGGAATTTTCTT
GGAACTATAGACAACAAAGTGTGCTTGACGTACTGGCTCAATGTCCTTCAGAACATTGAT
CAGACAAGTCGACCTTTTCTTGTGACCCTTAATCCCCCTCATACACCAGATCATACCTTG
CTGAAGTGGTCAACAAGCCATCCATTCCCATCAGTTGCTGCATCAAAAGCTTCACTTGAG
CTTGATCATATTCAGGGGAAGAGGGGAATATGGTTTTGTGGAGCATACCAGGGTTATGGC
TTCCATGAGGATGGATTAAAGGCTGGGATGGTTGCTGCACACGGTATGCTTGGAAAAGGT
TGTGCTGTCCTAAACAACCCAAAACATATGGTACCTTCTTTACTAGAAACAGGAGCGCGC
CTTTTTGTCACTAGGTTTCTTGGACATTATATCTCTACTGGTTGTTTAATTTTATTGGAG
GAAGGAGGCACGATTTACACCTTTGAAGGATCAAGGAAGAAATGCCTTTTGAAAGTTTCT
CTGAAGATTCACAATCCTCAGTTTTACTGGAAGGCATGGCCTTTTCACTTGCATTCTTTA
CAGATTGCTACACAGGCTGATTTAGGCCTTGCAGATGCATATATCAATGGAGATTTTTCT
CTTGTTGATAAAGACGAAGGGCTTCAAAATCTTTTCATGATTTTTATTGCCAACAGAGAT
TTGGATTCTTCTCTATCAAGGTTAAACAACAAAAGGGGGTGGTGGACACCATTGTTTTTC
ACAGCTGGAATAGCATCTGCAAGGTACTTCTTCCAGCATGTTTCAAGGCAAAATACTCTT
ACACAAGCTCGGAGGAACATCTCCCGCCATTATGATCTTAGTAATGAACTATTTTCTCTG
TTCTTGGATGAGACAATGACTTACTCTTGCGCAGTATTCAAGACGGAAGGTGAAGACTTG
AAAGTAGCACAGCTGAGAAAAATCTCTCTTCTCATTGAAAAAGTACGAATTGATAAGAAG
CATGAAGTTTTAGAGATTGGTTGTGGTTGGGGAAGTTTAGCTATTGAAGTTGTGAAACGA
ACTGGATGCAAATACACTGGCATCACTCTATCTGAGGAGCAGCTGAAATTTGCAGAAATG
AAAGTGAAGGAAGCTGGCCTTCAGGACAACATAAGATTCCTCCTTTGCGACTATCGCCAA
TTGTCCGATTCCTATAAATATGACAGAATTATATCTTGTGAGATGCTAGAAGCTGTGGGG
CATGAGTATATGGAGGAGTTTTTTGGTTGTTGTGAGTCAGTATTGGCAGAAGATGGACTT
CTTGTCCTGCAGTTCATATCGATCCCGGATGAAAGGTACGATGAATACAGAAGAAGCTCA
GATTTTATAAAGGAATACATTTTCCCTGGTGGATGCTTGCCTTCATTAAGTAGAGTAACA
ACAGCCATGGCTGCTTCATCAAGACTCTGCATGGAGCACCTGGAAAACATAGGAATACAT
TATTACCAGACATTGAGACATTGGAGGAAAAATTTCCTAGAGAATCAGAGCAAAATTATC
GAGCTTGGATTCAATGAGAAGTTCATAAGGACATGGGAGTATTATTTTGATTATTGTGCA
GCTGGTTTTAAAACTCACACTCTGGGAAATTATCAGATTGTATTCTCACGCCCTGGCAAT
GCTGCTGCATTTAGCAATCCATACGAAAGTGTGGTGTCAACTTATTGA

Peptide Sequence

PEP ID

VIT_05s0049g01650.t01
PEP Infomation

pep chromosome:12X:5:9095898:9110026:1 gene:VIT_05s0049g01650 transcript:VIT_05s0049g01650.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRAAVIGAGVSGLVSAYVLARAGMKVVLYEKEDYLGGHAKTVTVDGVPLDLGFMVFNRVT
YPNMMEFFETLGVDMELSDMSFAVSLDEGRGCEWGSRNGLSSLFAQKKNILNPYFWQMIG
DVIKFKDDVLKYLEELENNPDMDRNQTLGDFIKCRGYSELFQKAYLVPICASIWSCPAEG
VMTFSAFSVLSFCRNHHLLQLFGRPQWLTVKWRSHYYVNKVREELESKGCQIRTGCEVVS
VSTTDDGCTVFCGDGSQEMHDGCIMAVHAPDALNILGNKATFDEMRVLGAFQYVSSDIFL
HCDKNFMPQNPAAWSAWNFLGTIDNKVCLTYWLNVLQNIDQTSRPFLVTLNPPHTPDHTL
LKWSTSHPFPSVAASKASLELDHIQGKRGIWFCGAYQGYGFHEDGLKAGMVAAHGMLGKG
CAVLNNPKHMVPSLLETGARLFVTRFLGHYISTGCLILLEEGGTIYTFEGSRKKCLLKVS
LKIHNPQFYWKAWPFHLHSLQIATQADLGLADAYINGDFSLVDKDEGLQNLFMIFIANRD
LDSSLSRLNNKRGWWTPLFFTAGIASARYFFQHVSRQNTLTQARRNISRHYDLSNELFSL
FLDETMTYSCAVFKTEGEDLKVAQLRKISLLIEKVRIDKKHEVLEIGCGWGSLAIEVVKR
TGCKYTGITLSEEQLKFAEMKVKEAGLQDNIRFLLCDYRQLSDSYKYDRIISCEMLEAVG
HEYMEEFFGCCESVLAEDGLLVLQFISIPDERYDEYRRSSDFIKEYIFPGGCLPSLSRVT
TAMAASSRLCMEHLENIGIHYYQTLRHWRKNFLENQSKIIELGFNEKFIRTWEYYFDYCA
AGFKTHTLGNYQIVFSRPGNAAAFSNPYESVVSTY

Transcript Sequence

Transcript ID

VIT_05s0049g01650.t01
Transcript Infomation

cdna chromosome:12X:5:9095898:9110026:1 gene:VIT_05s0049g01650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAATTTCGAAAATGAGAGCGGCGGTGATCGGCGCCGGAGTAAGCGGACTGGTGTCGGCG
TATGTACTTGCCAGAGCCGGCATGAAGGTGGTGTTGTACGAGAAGGAAGATTACTTGGGC
GGCCATGCTAAGACTGTTACTGTCGACGGCGTCCCTCTGGACCTAGGCTTCATGGTCTTC
AATCGGGTAACATATCCAAATATGATGGAGTTCTTTGAGACTCTTGGGGTAGATATGGAG
CTATCAGACATGTCCTTTGCAGTGAGCTTAGATGAAGGGCGAGGCTGCGAGTGGGGCAGC
CGAAATGGTTTATCAAGTTTGTTTGCACAGAAGAAGAACATACTGAATCCATATTTTTGG
CAAATGATTGGAGATGTGATCAAGTTTAAGGATGATGTTCTCAAGTACCTTGAAGAGCTT
GAGAACAACCCAGACATGGATCGGAACCAGACCTTGGGCGACTTCATAAAGTGTCGTGGT
TACTCAGAGTTATTCCAGAAGGCTTATCTTGTCCCGATATGTGCTTCAATCTGGTCCTGC
CCGGCAGAAGGAGTAATGACTTTCTCGGCCTTTTCAGTTCTTTCGTTTTGCCGCAACCAC
CATCTCCTGCAGCTCTTTGGGCGCCCACAGTGGCTCACTGTCAAATGGCGCTCTCATTAT
TATGTTAATAAGGTCAGAGAAGAGCTAGAAAGTAAAGGTTGTCAAATAAGAACTGGTTGT
GAGGTTGTCTCTGTTTCAACTACAGATGATGGTTGCACTGTATTTTGTGGAGATGGGTCA
CAAGAAATGCACGATGGGTGCATAATGGCTGTCCATGCCCCTGATGCCTTGAACATATTA
GGAAACAAGGCAACATTTGATGAAATGAGAGTACTCGGTGCCTTCCAATATGTCTCTAGT
GATATTTTCCTTCATTGTGACAAAAATTTCATGCCCCAAAACCCAGCAGCATGGAGTGCT
TGGAATTTTCTTGGAACTATAGACAACAAAGTGTGCTTGACGTACTGGCTCAATGTCCTT
CAGAACATTGATCAGACAAGTCGACCTTTTCTTGTGACCCTTAATCCCCCTCATACACCA
GATCATACCTTGCTGAAGTGGTCAACAAGCCATCCATTCCCATCAGTTGCTGCATCAAAA
GCTTCACTTGAGCTTGATCATATTCAGGGGAAGAGGGGAATATGGTTTTGTGGAGCATAC
CAGGGTTATGGCTTCCATGAGGATGGATTAAAGGCTGGGATGGTTGCTGCACACGGTATG
CTTGGAAAAGGTTGTGCTGTCCTAAACAACCCAAAACATATGGTACCTTCTTTACTAGAA
ACAGGAGCGCGCCTTTTTGTCACTAGGTTTCTTGGACATTATATCTCTACTGGTTGTTTA
ATTTTATTGGAGGAAGGAGGCACGATTTACACCTTTGAAGGATCAAGGAAGAAATGCCTT
TTGAAAGTTTCTCTGAAGATTCACAATCCTCAGTTTTACTGGAAGGCATGGCCTTTTCAC
TTGCATTCTTTACAGATTGCTACACAGGCTGATTTAGGCCTTGCAGATGCATATATCAAT
GGAGATTTTTCTCTTGTTGATAAAGACGAAGGGCTTCAAAATCTTTTCATGATTTTTATT
GCCAACAGAGATTTGGATTCTTCTCTATCAAGGTTAAACAACAAAAGGGGGTGGTGGACA
CCATTGTTTTTCACAGCTGGAATAGCATCTGCAAGGTACTTCTTCCAGCATGTTTCAAGG
CAAAATACTCTTACACAAGCTCGGAGGAACATCTCCCGCCATTATGATCTTAGTAATGAA
CTATTTTCTCTGTTCTTGGATGAGACAATGACTTACTCTTGCGCAGTATTCAAGACGGAA
GGTGAAGACTTGAAAGTAGCACAGCTGAGAAAAATCTCTCTTCTCATTGAAAAAGTACGA
ATTGATAAGAAGCATGAAGTTTTAGAGATTGGTTGTGGTTGGGGAAGTTTAGCTATTGAA
GTTGTGAAACGAACTGGATGCAAATACACTGGCATCACTCTATCTGAGGAGCAGCTGAAA
TTTGCAGAAATGAAAGTGAAGGAAGCTGGCCTTCAGGACAACATAAGATTCCTCCTTTGC
GACTATCGCCAATTGTCCGATTCCTATAAATATGACAGAATTATATCTTGTGAGATGCTA
GAAGCTGTGGGGCATGAGTATATGGAGGAGTTTTTTGGTTGTTGTGAGTCAGTATTGGCA
GAAGATGGACTTCTTGTCCTGCAGTTCATATCGATCCCGGATGAAAGGTACGATGAATAC
AGAAGAAGCTCAGATTTTATAAAGGAATACATTTTCCCTGGTGGATGCTTGCCTTCATTA
AGTAGAGTAACAACAGCCATGGCTGCTTCATCAAGACTCTGCATGGAGCACCTGGAAAAC
ATAGGAATACATTATTACCAGACATTGAGACATTGGAGGAAAAATTTCCTAGAGAATCAG
AGCAAAATTATCGAGCTTGGATTCAATGAGAAGTTCATAAGGACATGGGAGTATTATTTT
GATTATTGTGCAGCTGGTTTTAAAACTCACACTCTGGGAAATTATCAGATTGTATTCTCA
CGCCCTGGCAATGCTGCTGCATTTAGCAATCCATACGAAAGTGTGGTGTCAACTTATTGA
CGCTACTCAATCATCCACTAAACCAGGTTGCATTGTCGCTCTTCATTTCAATTTTTATTT
TTATTTTTATTTTTTATCTTGTATGAGATTGTTATTGGTGTTGGCTTGTAACACAGTGCA
AGAAAATCTCAGGCCCTCATTTCAAATTTTCA