Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0049g01470.t01
CDS Infomation

cds chromosome:12X:5:8796226:8801679:1 gene:VIT_05s0049g01470 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGTGACATAATTTCAGGAAGCGATCCTTCGGTAATCGAAAGCAAAAGCAATTTTGAT
AGCGGTCGAATCTCAGATGTGAAAGCATGGCTTGCCTCTCAATTCGATGCCGCTGGCAAA
GACGTCCCTGATTTCGAATACACTCCTCGAACCATCGCTCATCTCCACAACCTCTCCACT
CTCTCCCAAGCCAAAACACAAGCTGCCGGCATAGTAGCCACCGATTTCCGCCAAAAAGCC
GCCGAATATCGTTGCCAAGCTGCTAGGGTTAGGGAGATATTGGAGAATGTGGGATTGGCA
CAAGAGGGTTTGCCTTCAAATGTGGTTGCATCGGCGCAGTGCCTTGCGAATGTGGCAAAT
TTGTTGAATACAAGAGATACTGAATTGAGTAGTTTTCTTGTAGCAATGGGGGACATGTCT
TTGAGGAAGACTGGAGTGGAGGAGAAGAGGGCTAAAGTGCAGAAGGAGTCCAAAATTCTT
CTTGATTACACCCGAAAAGCAATTGCAAGGCTGACTTATTTGAAAAGAACTCTTGCACAG
CTGGAAGATGATGTAGCTCCCTGTGAGGCTCAGATGGAAAATTGGAAGACAAACTTGGCA
ATAATGGTATCAAAAGAGCGACAATACCTGCAGCAATATAGTAACTATAAGGCATTACTT
AATCGTGTGGGCTACACCCCAGAGATCAGCCATGGGGTGTTGGTTGAAATGGCCGAGCAC
AGGAAGGACTTGGAGAAGAAAACGAAGCCCATCCTTGATACTTTGAGAAGCTACCAGGAC
TTGCCTCCTGATAAAGCCTTGGCTGCTCTAGCCATTGAGGACAAGAAAAGGCAGTATGCT
GCTGCAGAGAAGCACCTTGAAGATGTGTTGCATTCAGCTCTTGCCACTTCTGAGTAA

Peptide Sequence

PEP ID

VIT_05s0049g01470.t01
PEP Infomation

pep chromosome:12X:5:8796226:8801679:1 gene:VIT_05s0049g01470 transcript:VIT_05s0049g01470.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSDIISGSDPSVIESKSNFDSGRISDVKAWLASQFDAAGKDVPDFEYTPRTIAHLHNLST
LSQAKTQAAGIVATDFRQKAAEYRCQAARVREILENVGLAQEGLPSNVVASAQCLANVAN
LLNTRDTELSSFLVAMGDMSLRKTGVEEKRAKVQKESKILLDYTRKAIARLTYLKRTLAQ
LEDDVAPCEAQMENWKTNLAIMVSKERQYLQQYSNYKALLNRVGYTPEISHGVLVEMAEH
RKDLEKKTKPILDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKHLEDVLHSALATSE

Transcript Sequence

Transcript ID

VIT_05s0049g01470.t01
Transcript Infomation

cdna chromosome:12X:5:8796226:8801679:1 gene:VIT_05s0049g01470 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCAAAATGATCATGCGAACGACGCCATTTTACCAAGTTTGAAACGACGCATTTGGACAA
ATCTGGAATTGGAATTTCTCCCACGCATTCTCACCAACCAAAGGGCAGATAGATCGTCTC
TCCCGGGTCGTAGAAACTGAGAAATCAGCAATGAGTGACATAATTTCAGGAAGCGATCCT
TCGGTAATCGAAAGCAAAAGCAATTTTGATAGCGGTCGAATCTCAGATGTGAAAGCATGG
CTTGCCTCTCAATTCGATGCCGCTGGCAAAGACGTCCCTGATTTCGAATACACTCCTCGA
ACCATCGCTCATCTCCACAACCTCTCCACTCTCTCCCAAGCCAAAACACAAGCTGCCGGC
ATAGTAGCCACCGATTTCCGCCAAAAAGCCGCCGAATATCGTTGCCAAGCTGCTAGGGTT
AGGGAGATATTGGAGAATGTGGGATTGGCACAAGAGGGTTTGCCTTCAAATGTGGTTGCA
TCGGCGCAGTGCCTTGCGAATGTGGCAAATTTGTTGAATACAAGAGATACTGAATTGAGT
AGTTTTCTTGTAGCAATGGGGGACATGTCTTTGAGGAAGACTGGAGTGGAGGAGAAGAGG
GCTAAAGTGCAGAAGGAGTCCAAAATTCTTCTTGATTACACCCGAAAAGCAATTGCAAGG
CTGACTTATTTGAAAAGAACTCTTGCACAGCTGGAAGATGATGTAGCTCCCTGTGAGGCT
CAGATGGAAAATTGGAAGACAAACTTGGCAATAATGGTATCAAAAGAGCGACAATACCTG
CAGCAATATAGTAACTATAAGGCATTACTTAATCGTGTGGGCTACACCCCAGAGATCAGC
CATGGGGTGTTGGTTGAAATGGCCGAGCACAGGAAGGACTTGGAGAAGAAAACGAAGCCC
ATCCTTGATACTTTGAGAAGCTACCAGGACTTGCCTCCTGATAAAGCCTTGGCTGCTCTA
GCCATTGAGGACAAGAAAAGGCAGTATGCTGCTGCAGAGAAGCACCTTGAAGATGTGTTG
CATTCAGCTCTTGCCACTTCTGAGTAACATGCCAGAGCATGTTCCTCCTGTATCACATGA
TTCCCTAACACATACATTTATAATCTCATTTAGGAGAGTTCATATAGTAGTGAGCTTGTT
GTTATTGAATTGATGATTTCTGTTTATAATGGTATCTTGTAATGTACAAACCTTTTTTTA
TATAATCAATATTTGG