Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0049g01220.t01
CDS Infomation

cds chromosome:12X:5:8340132:8359048:1 gene:VIT_05s0049g01220 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:D7SZI1]
Sequence

ATGAAGTCAATAGGATGTTGGTTCAATAAGCTTAAATCAAGAGATAAGGCCAAGTCTTCA
AAGAAAGAAGCTACTAATAATGGAAAAGAAGGGTCAAAAGCAGTGACAAGTGAGGAAGCG
CCCTCAAATGTGACCAAGCAGAAGGTTGCAGCTGCAAAGCAGTATATAGAAAACCATTAT
AAGGAGCAGATGAAGAATCTTCAGGAGAGGAAGGAGCGACGTAATATACTAGAGAAGAAA
TTAGCTGATGCTGAAGTCTCTGAGGAAGAGCAAAATAACCTACTGAAGCATTTGGAGAAG
AAGGAAACAGAATATATGCGCCTCCAGAGGCATAAAATGGGTGCGGATGATTTTGAGCCA
TTGACAATGATAGGAAAAGGTGCATTTGGGGAGGTTAGAGTCTGCAGGGAGAAGAAAACC
GGCCATGTATATGCCATGAAGAAGCTTAAGAAATCAGAGATGCTTCGAAGGGGCCAGGTT
GAACATGTGAAGGCTGAGAGGAATTTACTTGCAGAGGTTGATAGCAATTGCATTGTCAAA
CTTTATTGTTCATTCCAAGATGAAGAGTTTCTTTATCTTGTAATGGAATATCTACCTGGT
GGAGATATGATGACTTTACTGATGCGAAAGGATACTTTGACTGAAGATGAGGCCAGATTT
TATGTTGGTGAAACCGTCCTTGCTATCGAGTCCATCCATAAGCATAATTATATTCATAGA
GATATCAAGCCCGACAATTTACTGCTCGATAGATATGGACATATGAAATTGTCAGATTTT
GGATTATGTAAACCATTGGATTGCAGTAATCTTCATGAGAAGGACTTTTCTCTAGGAAAC
AACCTAAGCGGGGCCCTTCAAAGTGATGGGCGCCCTGCAGCACCGAGACGCACACAGCAG
GAGCAATTGCAGCATTGGCAGAGGAACAGGAGAATGCTTGCCTATTCTACTGTTGGTACC
CCTGACTACATTGCTCCAGAAGTGCTGCTTAAGAAAGGATATGGGATGGAGTGTGATTGG
TGGTCTCTTGGTGCTATCATGTACGAAATGCTTGTGGGATATCCACCTTTTTATTCAGAT
GAACCTATGACAACTTGTAGGAAGATAGTAAACTGGAGAACTCATCTAAAATTTCCAGAA
GAAGCAAAGTTATCTCCAGAAGCAAAGGACCTTATTAGTAAGCTCTTATGTAATGTTGAC
CAGAGGCTTGGAACTAAAGGGGCAGATGAAATAAAGGCTCACCCCTGGTTTGAAGGTGTT
GACTGGGACAAATTGTATCAAATTGAAGCTGCATTTATTCCTGAGGTCAATGATGAGTTA
GATACCCAAAACTTTGAGAAGTTTGAAGAGGCTGATGACCAAATTCAGACTTCGTCAAAA
GCAGGTCCATGGAGGAAGATGCTTTCATCTAAAGACATCAACTTTGTAGGCTACACGTAT
AAGAACTTTGAAATTGTAAATGATCAGCCAGTACCTGGGATAGCTGAATTGAAGAAGAAG
AGCACCAAAACCAAAAGGCCCTCCATCAAGTCCCTCTTTGATGATGAATCTGGTGCAGCT
GCCAATGAACCTGTCCAGGGGAGCTTTCTCAACCTCTTACCCCCCAAACTAGAAGTGTCC
CAAAAACATGGTGATCCCCATAGACCCCATTAA

Peptide Sequence

PEP ID

VIT_05s0049g01220.t01
PEP Infomation

pep chromosome:12X:5:8340132:8359048:1 gene:VIT_05s0049g01220 transcript:VIT_05s0049g01220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:D7SZI1]
Sequence

MKSIGCWFNKLKSRDKAKSSKKEATNNGKEGSKAVTSEEAPSNVTKQKVAAAKQYIENHY
KEQMKNLQERKERRNILEKKLADAEVSEEEQNNLLKHLEKKETEYMRLQRHKMGADDFEP
LTMIGKGAFGEVRVCREKKTGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVK
LYCSFQDEEFLYLVMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHR
DIKPDNLLLDRYGHMKLSDFGLCKPLDCSNLHEKDFSLGNNLSGALQSDGRPAAPRRTQQ
EQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSD
EPMTTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVDQRLGTKGADEIKAHPWFEGV
DWDKLYQIEAAFIPEVNDELDTQNFEKFEEADDQIQTSSKAGPWRKMLSSKDINFVGYTY
KNFEIVNDQPVPGIAELKKKSTKTKRPSIKSLFDDESGAAANEPVQGSFLNLLPPKLEVS
QKHGDPHRPH

Transcript Sequence

Transcript ID

VIT_05s0049g01220.t01
Transcript Infomation

cdna chromosome:12X:5:8340132:8359048:1 gene:VIT_05s0049g01220 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:D7SZI1]
Sequence

GTTGTTTCAGAATTAAGAGTGCATGGAGATCTACGTGATACCGTAAATTGATGATGCGCT
CCTTGTAATTGGAGAAAGAAAGCAGTTTGAAAGTGCAGATTTTGAGGCATTAGTTGAAGG
AAAAGCAAAATGAAGTCAATAGGATGTTGGTTCAATAAGCTTAAATCAAGAGATAAGGCC
AAGTCTTCAAAGAAAGAAGCTACTAATAATGGAAAAGAAGGGTCAAAAGCAGTGACAAGT
GAGGAAGCGCCCTCAAATGTGACCAAGCAGAAGGTTGCAGCTGCAAAGCAGTATATAGAA
AACCATTATAAGGAGCAGATGAAGAATCTTCAGGAGAGGAAGGAGCGACGTAATATACTA
GAGAAGAAATTAGCTGATGCTGAAGTCTCTGAGGAAGAGCAAAATAACCTACTGAAGCAT
TTGGAGAAGAAGGAAACAGAATATATGCGCCTCCAGAGGCATAAAATGGGTGCGGATGAT
TTTGAGCCATTGACAATGATAGGAAAAGGTGCATTTGGGGAGGTTAGAGTCTGCAGGGAG
AAGAAAACCGGCCATGTATATGCCATGAAGAAGCTTAAGAAATCAGAGATGCTTCGAAGG
GGCCAGGTTGAACATGTGAAGGCTGAGAGGAATTTACTTGCAGAGGTTGATAGCAATTGC
ATTGTCAAACTTTATTGTTCATTCCAAGATGAAGAGTTTCTTTATCTTGTAATGGAATAT
CTACCTGGTGGAGATATGATGACTTTACTGATGCGAAAGGATACTTTGACTGAAGATGAG
GCCAGATTTTATGTTGGTGAAACCGTCCTTGCTATCGAGTCCATCCATAAGCATAATTAT
ATTCATAGAGATATCAAGCCCGACAATTTACTGCTCGATAGATATGGACATATGAAATTG
TCAGATTTTGGATTATGTAAACCATTGGATTGCAGTAATCTTCATGAGAAGGACTTTTCT
CTAGGAAACAACCTAAGCGGGGCCCTTCAAAGTGATGGGCGCCCTGCAGCACCGAGACGC
ACACAGCAGGAGCAATTGCAGCATTGGCAGAGGAACAGGAGAATGCTTGCCTATTCTACT
GTTGGTACCCCTGACTACATTGCTCCAGAAGTGCTGCTTAAGAAAGGATATGGGATGGAG
TGTGATTGGTGGTCTCTTGGTGCTATCATGTACGAAATGCTTGTGGGATATCCACCTTTT
TATTCAGATGAACCTATGACAACTTGTAGGAAGATAGTAAACTGGAGAACTCATCTAAAA
TTTCCAGAAGAAGCAAAGTTATCTCCAGAAGCAAAGGACCTTATTAGTAAGCTCTTATGT
AATGTTGACCAGAGGCTTGGAACTAAAGGGGCAGATGAAATAAAGGCTCACCCCTGGTTT
GAAGGTGTTGACTGGGACAAATTGTATCAAATTGAAGCTGCATTTATTCCTGAGGTCAAT
GATGAGTTAGATACCCAAAACTTTGAGAAGTTTGAAGAGGCTGATGACCAAATTCAGACT
TCGTCAAAAGCAGGTCCATGGAGGAAGATGCTTTCATCTAAAGACATCAACTTTGTAGGC
TACACGTATAAGAACTTTGAAATTGTAAATGATCAGCCAGTACCTGGGATAGCTGAATTG
AAGAAGAAGAGCACCAAAACCAAAAGGCCCTCCATCAAGTCCCTCTTTGATGATGAATCT
GGTGCAGCTGCCAATGAACCTGTCCAGGGGAGCTTTCTCAACCTCTTACCCCCCAAACTA
GAAGTGTCCCAAAAACATGGTGATCCCCATAGACCCCATTAATCTTATCATTCAAATCAA
ATGGCATCAGAGATCCAACCAAACAAGATGAAACTTGTCCCTGATGAATAACTTTTGTTT
GCCGGCTTCCTGCATTTAGTTTTTATGTTGACACCGGAAGTTTTAGGGCCTAAAAGAATG
CGTGGGTTTTTGGAGGATAGCAGGTGGCTTTGTATCAGATTGGGTGTTGGTCTTTGTAAA
GTATTTTGTGAAAAAATATATAGTGTAATTCGTTCAATTTTCACTTGTAATTTTTTTTCT
TACAAAACCCGTAGTCATGGGTTCCCATGTAATTAACTCCTTGAGGTTTGGTTAATTGAT
AGGTATACCAGTTCGTTCTTCTTAGGAAAT