Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0049g00940.t01
CDS Infomation

cds chromosome:12X:5:7951247:7952979:1 gene:VIT_05s0049g00940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCAAGAATCAATTGCAAGTGCTTAACGCACTTGATGTAGCCAAAACACAATGGTAT
CATTTCACGGCGATTGTCATTGCTGGAATGGGCTTCTTCACTGATGCATATGATCTCTTC
TGTATATCATTGGTCACAAAATTGTTGGGTCGCATATACTACCATTCTCCTGGGGATGCT
AAGCCCGGCACTTTGCCTCCAAATGTGTCGGCTGCAGTTAACGGTGTTGCGTTCTGCGGT
ACTCTTGCCGGACAGCTCTTTTTTGGATGGCTCGGTGACAAAATGGGCAGAAAACGTGTG
TATGGCATGACCCTCATGCTCATGGTCATATGCTCAGTTGCCTCTGGCCTTTCCTTTGGC
CATGAAGCGAAAGGTGTTATGGCCACTCTGTGCTTCTTCAGGTTCTGGCTGGGCTTTGGC
ATAGGTGGAGACTACCCGCTTTCTGCCACTATTATGTCTGAGTATGCTAATAAAAAGACT
CGTGGAGCCTTCATTGCTGCAGTTTTTGCCATGCAAGGTTTTGGGATTTTAACTGGTGGA
ATCTTTGCAATTATAATTTCTGCCTCGTTTAAGGCTGCATTTCCTTCTCCAACTTATGAA
ATTGATCCAGTTGGGTCTACTGTTCCACAAGCTGATTTTGTTTGGCGGATAATTCTCATG
TTTGGCGCCTTGCCGGCTGCTCTTACTTATTACTGGCGTATGAAGATGCCAGAGACTGCT
CGTTACACAGCCTTGGTTGCCAAGAATGCGAAGAAGGCTGCAGCAGATATGTCTAAAGTT
CTCCAGGTTGATCTAGAAGCAGAACAAGAGAAAGTTGAGTCGATCCAACGGCAAGGTAAA
GATTTTGGGTTGTTCACCAAGCAGTTTCTTCGTCGCCATGGACTTCACTTGCTTGGGACC
ACTAGCACATGGTTCTTGTTGGACATCGCCTTCTACAGTCAGAATCTGTTTCAAAAGGAC
ATCTTCAGTGCCATTGGGTGGATTCCTGCCGCCAAAACCATGAGTGCCCTTGAAGAGGTT
TACAAAATTGCAAGGGCCCAAACTCTCATAGCCCTCTGCAGCACTGTTCCTGGGTACTGG
TTCACAGTAGCGTTAATCGACAAGATGGGAAGATTTGCCATCCAATTGATGGGCTTCTTC
TTTATGACCGTCTTCATGTTTGCCCTGGCTATACCTTACAATCACTGGACCCATAAAGAA
AACCGAATTGGGTTCGTGGTGATGTACTCTCTCACATTCTTCTTCGCAAATTTTGGTCCA
AATGCCACCACATTTGTTGTGCCAGCCGAGATTTTCCCTGCAAGGCTACGCTCCACATGC
CATGGAATATCAGCAGCGGCTGGGAAGGCAGGGGCCATTGTTGGTGCCTTTGGCTTCTTG
TATGCTGCTCAGAGCCAGGACAAGTCTAAGGTAGATAAAGGGTACCCAACCGGTATTGGT
GTAAAAAATTCACTCATAGTTCTGGGTGTCGTCAACTTTCTGGGAATGTTATTTACCTTC
TTGGTGCCCGAGTCCAAGGGAAAGTCACTAGAGGAAATGTCTGGTGAGAACGAAGAAGAA
GAGAGTCCGTCGGAGGAGTCAAGACAGCAGGCTAGGACTGTTCCAGTTTAA

Peptide Sequence

PEP ID

VIT_05s0049g00940.t01
PEP Infomation

pep chromosome:12X:5:7951247:7952979:1 gene:VIT_05s0049g00940 transcript:VIT_05s0049g00940.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKNQLQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHSPGDA
KPGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVICSVASGLSFG
HEAKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILTGG
IFAIIISASFKAAFPSPTYEIDPVGSTVPQADFVWRIILMFGALPAALTYYWRMKMPETA
RYTALVAKNAKKAAADMSKVLQVDLEAEQEKVESIQRQGKDFGLFTKQFLRRHGLHLLGT
TSTWFLLDIAFYSQNLFQKDIFSAIGWIPAAKTMSALEEVYKIARAQTLIALCSTVPGYW
FTVALIDKMGRFAIQLMGFFFMTVFMFALAIPYNHWTHKENRIGFVVMYSLTFFFANFGP
NATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSQDKSKVDKGYPTGIG
VKNSLIVLGVVNFLGMLFTFLVPESKGKSLEEMSGENEEEESPSEESRQQARTVPV

Transcript Sequence

Transcript ID

VIT_05s0049g00940.t01
Transcript Infomation

cdna chromosome:12X:5:7951247:7952979:1 gene:VIT_05s0049g00940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGACTAGCCATGGCCAAGAATCAATTGCAAGTGCTTAACGCACTTGATGTAGCCAAAAC
ACAATGGTATCATTTCACGGCGATTGTCATTGCTGGAATGGGCTTCTTCACTGATGCATA
TGATCTCTTCTGTATATCATTGGTCACAAAATTGTTGGGTCGCATATACTACCATTCTCC
TGGGGATGCTAAGCCCGGCACTTTGCCTCCAAATGTGTCGGCTGCAGTTAACGGTGTTGC
GTTCTGCGGTACTCTTGCCGGACAGCTCTTTTTTGGATGGCTCGGTGACAAAATGGGCAG
AAAACGTGTGTATGGCATGACCCTCATGCTCATGGTCATATGCTCAGTTGCCTCTGGCCT
TTCCTTTGGCCATGAAGCGAAAGGTGTTATGGCCACTCTGTGCTTCTTCAGGTTCTGGCT
GGGCTTTGGCATAGGTGGAGACTACCCGCTTTCTGCCACTATTATGTCTGAGTATGCTAA
TAAAAAGACTCGTGGAGCCTTCATTGCTGCAGTTTTTGCCATGCAAGGTTTTGGGATTTT
AACTGGTGGAATCTTTGCAATTATAATTTCTGCCTCGTTTAAGGCTGCATTTCCTTCTCC
AACTTATGAAATTGATCCAGTTGGGTCTACTGTTCCACAAGCTGATTTTGTTTGGCGGAT
AATTCTCATGTTTGGCGCCTTGCCGGCTGCTCTTACTTATTACTGGCGTATGAAGATGCC
AGAGACTGCTCGTTACACAGCCTTGGTTGCCAAGAATGCGAAGAAGGCTGCAGCAGATAT
GTCTAAAGTTCTCCAGGTTGATCTAGAAGCAGAACAAGAGAAAGTTGAGTCGATCCAACG
GCAAGGTAAAGATTTTGGGTTGTTCACCAAGCAGTTTCTTCGTCGCCATGGACTTCACTT
GCTTGGGACCACTAGCACATGGTTCTTGTTGGACATCGCCTTCTACAGTCAGAATCTGTT
TCAAAAGGACATCTTCAGTGCCATTGGGTGGATTCCTGCCGCCAAAACCATGAGTGCCCT
TGAAGAGGTTTACAAAATTGCAAGGGCCCAAACTCTCATAGCCCTCTGCAGCACTGTTCC
TGGGTACTGGTTCACAGTAGCGTTAATCGACAAGATGGGAAGATTTGCCATCCAATTGAT
GGGCTTCTTCTTTATGACCGTCTTCATGTTTGCCCTGGCTATACCTTACAATCACTGGAC
CCATAAAGAAAACCGAATTGGGTTCGTGGTGATGTACTCTCTCACATTCTTCTTCGCAAA
TTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCCGAGATTTTCCCTGCAAGGCTACG
CTCCACATGCCATGGAATATCAGCAGCGGCTGGGAAGGCAGGGGCCATTGTTGGTGCCTT
TGGCTTCTTGTATGCTGCTCAGAGCCAGGACAAGTCTAAGGTAGATAAAGGGTACCCAAC
CGGTATTGGTGTAAAAAATTCACTCATAGTTCTGGGTGTCGTCAACTTTCTGGGAATGTT
ATTTACCTTCTTGGTGCCCGAGTCCAAGGGAAAGTCACTAGAGGAAATGTCTGGTGAGAA
CGAAGAAGAAGAGAGTCCGTCGGAGGAGTCAAGACAGCAGGCTAGGACTGTTCCAGTTTA
ATTAGACCTTTTATATTAATGTGATCATTTCCTGTAATATGGGGAATTTACTTAGATATA
TTTTGTCTTTAATGTGTTTTATCACATAAATAAGCTTTTATCCATGCTGCTTT