Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0049g00890.t01
CDS Infomation

cds chromosome:12X:5:7894018:7899124:1 gene:VIT_05s0049g00890 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:D7SZF7]
Sequence

ATGGAACCTGCCGTTCTTGACGATATTATCGAAAGGTTACTTGCCGTCAAAGCCAGGCCA
GGGAAGCAAGTGCAGCTTTCTGAGGCCGAGATCAGGCAGCTTTGTGTTGCTTCCAAGGAT
ATTTTCCTGAGACAGCCCAATCTATTGGAGCTCCAAGCCCCCGTCAAGATCTGCGGGGAC
ATTCATGGTCAGTATTCGGATCTTCTAAGGCTTTTTGACTATGGTGGACTGCCGCCTGAA
TCCAATTACTTGTTCTTAGGGGACTATGTAGATCGAGGAAAGCAAAGCCTGGAAACTATA
TGCCTTCTGCTTGCATATAAAATAAGATACCCTGAGAACTTTTTCCTATTGAGGGGCAAC
CATGAATGTGCTTCTATAAACCGTATCTATGGATTTTATGACGAGTGTAAGAGAAGATTC
AATGTCAGATTGTGGAAAGTGTTCACAGATTGTTTCAATTGCCTACCTGTGGCTGCTCTC
ATTGATGAAAAGATACTCTGCATGCATGGTGGGCTTTCCCCTGATCTGCGGAGTTTAGAT
CAAATAAGGAATTTGCAGCGGCCTACTGATGTTCCAGATGCTGGTTTGCTATGCGATCTT
CTCTGGTCTGATCCTAGTAATGATGTTCGAGGTTGGGGGATGAATGATAGAGGCGTTTCT
TATGTCTTTGGCCCTGATAAGGTGACAGAGCTTCTTCAGAAGCATGATCTGGACCTTATT
TGTCGTGCCCACCAGGTTGTGGAAGATGGATACGAGTTTTTTGCTAATAGACAACTTGTA
ACCATATTTTCAGCACCTAATTACTGTGGTGAGTTTGATAATGCGGGTGCCATGATGAGT
GTGGATGACACTCTCATGTGTTCTTTCCAAGTATTAAAACCTGCAGAAAAGAATAAAAAA
TTTAGCTTTGGAAGCACTACTACAGCTAAGCCTGGCAGCTGTCCTGCAAGACTCAAGTCT
ATCCTTGGTGCAAAAGTATGA

Peptide Sequence

PEP ID

VIT_05s0049g00890.t01
PEP Infomation

pep chromosome:12X:5:7894018:7899124:1 gene:VIT_05s0049g00890 transcript:VIT_05s0049g00890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:D7SZF7]
Sequence

MEPAVLDDIIERLLAVKARPGKQVQLSEAEIRQLCVASKDIFLRQPNLLELQAPVKICGD
IHGQYSDLLRLFDYGGLPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGN
HECASINRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALIDEKILCMHGGLSPDLRSLD
QIRNLQRPTDVPDAGLLCDLLWSDPSNDVRGWGMNDRGVSYVFGPDKVTELLQKHDLDLI
CRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDDTLMCSFQVLKPAEKNKK
FSFGSTTTAKPGSCPARLKSILGAKV

Transcript Sequence

Transcript ID

VIT_05s0049g00890.t01
Transcript Infomation

cdna chromosome:12X:5:7894018:7899124:1 gene:VIT_05s0049g00890 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:D7SZF7]
Sequence

AGTTATGGAACCTGCCGTTCTTGACGATATTATCGAAAGGTTACTTGCCGTCAAAGCCAG
GCCAGGGAAGCAAGTGCAGCTTTCTGAGGCCGAGATCAGGCAGCTTTGTGTTGCTTCCAA
GGATATTTTCCTGAGACAGCCCAATCTATTGGAGCTCCAAGCCCCCGTCAAGATCTGCGG
GGACATTCATGGTCAGTATTCGGATCTTCTAAGGCTTTTTGACTATGGTGGACTGCCGCC
TGAATCCAATTACTTGTTCTTAGGGGACTATGTAGATCGAGGAAAGCAAAGCCTGGAAAC
TATATGCCTTCTGCTTGCATATAAAATAAGATACCCTGAGAACTTTTTCCTATTGAGGGG
CAACCATGAATGTGCTTCTATAAACCGTATCTATGGATTTTATGACGAGTGTAAGAGAAG
ATTCAATGTCAGATTGTGGAAAGTGTTCACAGATTGTTTCAATTGCCTACCTGTGGCTGC
TCTCATTGATGAAAAGATACTCTGCATGCATGGTGGGCTTTCCCCTGATCTGCGGAGTTT
AGATCAAATAAGGAATTTGCAGCGGCCTACTGATGTTCCAGATGCTGGTTTGCTATGCGA
TCTTCTCTGGTCTGATCCTAGTAATGATGTTCGAGGTTGGGGGATGAATGATAGAGGCGT
TTCTTATGTCTTTGGCCCTGATAAGGTGACAGAGCTTCTTCAGAAGCATGATCTGGACCT
TATTTGTCGTGCCCACCAGGTTGTGGAAGATGGATACGAGTTTTTTGCTAATAGACAACT
TGTAACCATATTTTCAGCACCTAATTACTGTGGTGAGTTTGATAATGCGGGTGCCATGAT
GAGTGTGGATGACACTCTCATGTGTTCTTTCCAAGTATTAAAACCTGCAGAAAAGAATAA
AAAATTTAGCTTTGGAAGCACTACTACAGCTAAGCCTGGCAGCTGTCCTGCAAGACTCAA
GTCTATCCTTGGTGCAAAAGTATGAAAGATGTGGTCTTTTTGAAGGAGAGAGCTGTCCTG
GATCAGAGGTGATGGTAATAACATAGCCAAAGTGACTGTTCAAGAAATTGGGGTTTCTGT
TCATTTCATTATGAGTAAGTGTAAAAATTGGGGATCCTTGTAGGCAAAGAGTGCAGATGA
TTTTCAGCCACCATGCACAGAAGTTTGGAAGGCTGTAATTTATCTGTCTCACTCTTCTCA
TGTATAATACTAGTTGCTACAACAATGGATTCGTGTTTCTTTACCCCTTTCTTGTTCCCT
TGTCTCCCTTCTCTTGCTTCTATGATTCTATCCCACCTGTTCTCCTTATATTATGACCAA
AACATGAAACTCTAATGGGGATCCCTTGGAAAGTTTCAAATCGTGGAATTTAATCTTGCA
TTTGGGCTCTGTCCATTGTGCTTCTAA