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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0049g00440.t01
CDS Infomation

cds chromosome:12X:5:7484185:7487802:1 gene:VIT_05s0049g00440 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein [Source:UniProtKB/TrEMBL;Acc:D7SZC9]
Sequence

ATGAAGGATTTTCCTGGAACACCTGGGACTTGGACTGGGCTTATTCTTAGGATTTCCCAG
TGCATGTTTGCAGCTGGTTCGATTGCTTCCATGGCAACTACTTCCAGCTTCTTCAGTGTC
ACAGCTTTTTGCTACTTGATCGCATCAATGGGTTTGCAAGTCATTTGGAGCTTTGGGCTT
GCTTTCTTGGATGCATATGCCTTGGTGAAAAAGAAGGTCCTCCACAATCCTGTTTTGGTC
AGCCTCTTTGTAGTTGGAGACTGGGTTACAGCAACATTGTCCCTTGCAGCCGCCTCTGCA
TCTGCCGGCATCACAGTCTTGTACTATAGCGATTTTGGAGACTGTGATTTCGGGAAGGAA
TGCCAAAAATACCAGATTTCAGTTGCATTGGCCTTCCTGAGTTGGATAATGATTGCAACC
TCATCCCTAATCATGTTTTGGCTTTTAGCTGCAGGTTAA

Peptide Sequence

PEP ID

VIT_05s0049g00440.t01
PEP Infomation

pep chromosome:12X:5:7484185:7487802:1 gene:VIT_05s0049g00440 transcript:VIT_05s0049g00440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein [Source:UniProtKB/TrEMBL;Acc:D7SZC9]
Sequence

MKDFPGTPGTWTGLILRISQCMFAAGSIASMATTSSFFSVTAFCYLIASMGLQVIWSFGL
AFLDAYALVKKKVLHNPVLVSLFVVGDWVTATLSLAAASASAGITVLYYSDFGDCDFGKE
CQKYQISVALAFLSWIMIATSSLIMFWLLAAG

Transcript Sequence

Transcript ID

VIT_05s0049g00440.t01
Transcript Infomation

cdna chromosome:12X:5:7484185:7487802:1 gene:VIT_05s0049g00440 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein [Source:UniProtKB/TrEMBL;Acc:D7SZC9]
Sequence

TTGGGTGTAATTTCTCGTCATTTATTGGAATATAGTTTCTGGGTTCCAGTTGTATTGGGT
TCTTCGCATGCTAGGTCGGTAAGGGCGGGATGAGACTTGATGATTCGATGAGTTGTTGTA
TGTATAGGTAATTCTGGTGCATTGGTAATTTGTCTGATCCTCAAAGAATCTGAAATTTTC
CTGGATTTGGAGAGAGAGATGAAGGATTTTCCTGGAACACCTGGGACTTGGACTGGGCTT
ATTCTTAGGATTTCCCAGTGCATGTTTGCAGCTGGTTCGATTGCTTCCATGGCAACTACT
TCCAGCTTCTTCAGTGTCACAGCTTTTTGCTACTTGATCGCATCAATGGGTTTGCAAGTC
ATTTGGAGCTTTGGGCTTGCTTTCTTGGATGCATATGCCTTGGTGAAAAAGAAGGTCCTC
CACAATCCTGTTTTGGTCAGCCTCTTTGTAGTTGGAGACTGGGTTACAGCAACATTGTCC
CTTGCAGCCGCCTCTGCATCTGCCGGCATCACAGTCTTGTACTATAGCGATTTTGGAGAC
TGTGATTTCGGGAAGGAATGCCAAAAATACCAGATTTCAGTTGCATTGGCCTTCCTGAGT
TGGATAATGATTGCAACCTCATCCCTAATCATGTTTTGGCTTTTAGCTGCAGGTTAAACC
TTCCTTTATTTGGATATTCTATTTGCTGTCTCGAAATGCATCTGTGTCATAAAAATTTAG
ATCATTTATATACTGTGAATAGAAAAGAAAACAAAAAGTATAGCATTCCATT