Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0049g00180.t01
CDS Infomation

cds chromosome:12X:5:7235454:7236440:1 gene:VIT_05s0049g00180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGCACCTTAGAGCAGCGGGGCAATCTCTTCTTCCTAACCCTAACCGGCGACAATGAA
CACCGATTAGGCCCCTCGCTCTTCGACTCCATCAGATCCGCTCTTGCTCAGGTTAAATCC
CAAGCCACTCCTGGCTCTGCTCTCATCACCACCGCCCAGGGAAAATTCTTCTCCAACGGC
TTGGACCTCGCCTGGGCCCAAGCCGCCGGATCCTCCAGTTTCCGAGACCGTCTCAGCCAC
TTGCTCGACTGCTTCAAGCCGATCGTCGCTGATTTACTCTCACTCCCGATGCCCACAATA
GCCGCCGTCTCCGGTCACGCCGCCGCCGCCGGATTTATGCTCGCTATCAGCCACGACTAC
GTTCTCATGAAGAACGACAGAAGCGTGCTGTATATGAGCGAGCTGGACATTGGCCTGACC
TTCCCCGACTACTTCATGGCGATGATGAAGTCCAAGATCAGCGATCCGGCTGCAAGACGC
GATGTGATGTTGAGAGCAAAAAAGGTGAAAGCGGAGGAGGCAGTGAGGATGGGGATTGTG
GATTCGGCGCACGATAGCGCGGAGAGCACGGTGGAGGCTGCGGTGCGCCTGGCGGAGCAG
TTGAGCGGTCGTAAATGGAACGGCGAGGTGTATGCTGAGATCAGAAAAGCGATGCATCCC
GAAGTATGCGGACTGCTGGGATTGTCTCATAGGGCCGTTGTGGCGCCACGGCTTTGA

Peptide Sequence

PEP ID

VIT_05s0049g00180.t01
PEP Infomation

pep chromosome:12X:5:7235454:7236440:1 gene:VIT_05s0049g00180 transcript:VIT_05s0049g00180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MCTLEQRGNLFFLTLTGDNEHRLGPSLFDSIRSALAQVKSQATPGSALITTAQGKFFSNG
LDLAWAQAAGSSSFRDRLSHLLDCFKPIVADLLSLPMPTIAAVSGHAAAAGFMLAISHDY
VLMKNDRSVLYMSELDIGLTFPDYFMAMMKSKISDPAARRDVMLRAKKVKAEEAVRMGIV
DSAHDSAESTVEAAVRLAEQLSGRKWNGEVYAEIRKAMHPEVCGLLGLSHRAVVAPRL

Transcript Sequence

Transcript ID

VIT_05s0049g00180.t01
Transcript Infomation

cdna chromosome:12X:5:7235454:7236440:1 gene:VIT_05s0049g00180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGTACTACGCTGACCACGACCACCATGTGCACCTTAGAGCAGCGGGGCAATCTCTTCTTC
CTAACCCTAACCGGCGACAATGAACACCGATTAGGCCCCTCGCTCTTCGACTCCATCAGA
TCCGCTCTTGCTCAGGTTAAATCCCAAGCCACTCCTGGCTCTGCTCTCATCACCACCGCC
CAGGGAAAATTCTTCTCCAACGGCTTGGACCTCGCCTGGGCCCAAGCCGCCGGATCCTCC
AGTTTCCGAGACCGTCTCAGCCACTTGCTCGACTGCTTCAAGCCGATCGTCGCTGATTTA
CTCTCACTCCCGATGCCCACAATAGCCGCCGTCTCCGGTCACGCCGCCGCCGCCGGATTT
ATGCTCGCTATCAGCCACGACTACGTTCTCATGAAGAACGACAGAAGCGTGCTGTATATG
AGCGAGCTGGACATTGGCCTGACCTTCCCCGACTACTTCATGGCGATGATGAAGTCCAAG
ATCAGCGATCCGGCTGCAAGACGCGATGTGATGTTGAGAGCAAAAAAGGTGAAAGCGGAG
GAGGCAGTGAGGATGGGGATTGTGGATTCGGCGCACGATAGCGCGGAGAGCACGGTGGAG
GCTGCGGTGCGCCTGGCGGAGCAGTTGAGCGGTCGTAAATGGAACGGCGAGGTGTATGCT
GAGATCAGAAAAGCGATGCATCCCGAAGTATGCGGACTGCTGGGATTGTCTCATAGGGCC
GTTGTGGCGCCACGGCTTTGAGAAATCAAAGTCATTTCCTTGCTTTGTTATTAAACCATA
AATATTATCAAAAACTGTCTTAAATCGTTCAGCACCGCCTCGGTTTGATGATCATTCGCT
GCGAAGGTCGTGAACATCTGTGGCATCTGTCCGATCTTATATCCGTATAAATTAAGTGTA
CTCCTGTACTGCTGCACCCCCAATTCTGCCATTGTTGAGTCCCAATAGATGGTTTGCTTA
ATTCCAATTGAAGAAGAAATAATCGTC