Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0029g00640.t01
CDS Infomation

cds chromosome:12X:5:15612760:15655148:-1 gene:VIT_05s0029g00640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAGAGGCTCCGGCGGCAGGAACGATGGATCTGGACACCATTCGGAGTCGAATGAGT
GAGCTCAACCGCATTCATACAAATTACTCTCATATTTCCGACTCAAATCCTTTGGATTCC
CGAAGTTTATTCCAAGAATTTTCTCATCATCTCCAGAGCAGAGTGAATCAGATTTTATCC
CAGTACTCTGATGTGGAGTCATTGGAGGCAGACGATTTGGATGCATATTTGGGACATTTG
AAGAAGGAACTTAACTTGGTGGAGTCTGAGAACGCTAAAATCTCCAATGAAATTGAGGCT
CTTACAAGAACCTATGTGGAAGATTCTAATCAATTGGAGAGTGATCTTGAAGTGTTGAAA
CATTCAGTGGATTTTGTTGCATCACAGGGTCTGAAGAGAGCAGAAGCAGGTGCACTTGTT
GATTACTCTTCATCTGTAGAAGATCAATTGGACTCCAGAACTGCACATGGAGACAACAAC
TTTGAGATTTTGGACCTTAATTATCAGACTCAGAAGAATAAAATAACTTTGAAGTCATTG
CAAGACCTTGACTATACTTTTAAAAGGTTTGAGGCTATAGAGAAGATTGAGGATGCATTG
ACAGGTCTAAAGGTCATTGATTTTGAAGGAAACTGCATTAGGTTGTCATTGAGCACATTC
ATTCCAAATTTAGAAGGCTTATTGTGTGAAGAAAAAATTGAAGCTGTCAATGAACCATCT
GAACTCAACCATGAATTGTTAATAGAGGTTATGGATCAGAGTATGGAGCTCAAGAATGTT
GAGATTTTTCCAAATGATGTGTACCTTGGTGAGATTATTGATGCTGCAAAGTCTTCCAGG
AAATTATTTTCACATATGTCAATATTGGAGACTAGGTCTTCTTTAGAGTGGTTTGTTAGA
AAAGTTCAAGATAAAATTATTTTATGTGCTCTAAGGCAATCTATAGTAAAGGGAGCAAAC
AAATCGAGGCATTCCCTTGAGTACTTGGATAGAGATGAGATTATAGTAGCTCATATGGTA
GGGGGAGTTGATGCATATATAAAGGTGTGTCAAGGGTGGCCTGTATCAAATAATGCACTG
AAGCTTAAATCTCTCAAGAGCTCAGATCAGCAGTCAAAAGGAATTTCTTTGAGCTTTCTT
TGCAAGGTTGAGGAAATGGCAAACTCCTTGGATGTGTCCATACGAAAAAATATTTCAAGC
TTTGTGGATGCCATAGAAGAAATACTTGTGCAGCAAATGCAGTCCAAGCTCCATGTTGTC
GATGTTCCTGGAAAGTGA

Peptide Sequence

PEP ID

VIT_05s0029g00640.t01
PEP Infomation

pep chromosome:12X:5:15612760:15655148:-1 gene:VIT_05s0029g00640 transcript:VIT_05s0029g00640.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGEAPAAGTMDLDTIRSRMSELNRIHTNYSHISDSNPLDSRSLFQEFSHHLQSRVNQILS
QYSDVESLEADDLDAYLGHLKKELNLVESENAKISNEIEALTRTYVEDSNQLESDLEVLK
HSVDFVASQGLKRAEAGALVDYSSSVEDQLDSRTAHGDNNFEILDLNYQTQKNKITLKSL
QDLDYTFKRFEAIEKIEDALTGLKVIDFEGNCIRLSLSTFIPNLEGLLCEEKIEAVNEPS
ELNHELLIEVMDQSMELKNVEIFPNDVYLGEIIDAAKSSRKLFSHMSILETRSSLEWFVR
KVQDKIILCALRQSIVKGANKSRHSLEYLDRDEIIVAHMVGGVDAYIKVCQGWPVSNNAL
KLKSLKSSDQQSKGISLSFLCKVEEMANSLDVSIRKNISSFVDAIEEILVQQMQSKLHVV
DVPGK

Transcript Sequence

Transcript ID

VIT_05s0029g00640.t01
Transcript Infomation

cdna chromosome:12X:5:15612760:15655148:-1 gene:VIT_05s0029g00640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAAGCGAGAGAGAAATGGGAGAGGCTCCGGCGGCAGGAACGATGGATCTGGACACCATT
CGGAGTCGAATGAGTGAGCTCAACCGCATTCATACAAATTACTCTCATATTTCCGACTCA
AATCCTTTGGATTCCCGAAGTTTATTCCAAGAATTTTCTCATCATCTCCAGAGCAGAGTG
AATCAGATTTTATCCCAGTACTCTGATGTGGAGTCATTGGAGGCAGACGATTTGGATGCA
TATTTGGGACATTTGAAGAAGGAACTTAACTTGGTGGAGTCTGAGAACGCTAAAATCTCC
AATGAAATTGAGGCTCTTACAAGAACCTATGTGGAAGATTCTAATCAATTGGAGAGTGAT
CTTGAAGTGTTGAAACATTCAGTGGATTTTGTTGCATCACAGGGTCTGAAGAGAGCAGAA
GCAGGTGCACTTGTTGATTACTCTTCATCTGTAGAAGATCAATTGGACTCCAGAACTGCA
CATGGAGACAACAACTTTGAGATTTTGGACCTTAATTATCAGACTCAGAAGAATAAAATA
ACTTTGAAGTCATTGCAAGACCTTGACTATACTTTTAAAAGGTTTGAGGCTATAGAGAAG
ATTGAGGATGCATTGACAGGTCTAAAGGTCATTGATTTTGAAGGAAACTGCATTAGGTTG
TCATTGAGCACATTCATTCCAAATTTAGAAGGCTTATTGTGTGAAGAAAAAATTGAAGCT
GTCAATGAACCATCTGAACTCAACCATGAATTGTTAATAGAGGTTATGGATCAGAGTATG
GAGCTCAAGAATGTTGAGATTTTTCCAAATGATGTGTACCTTGGTGAGATTATTGATGCT
GCAAAGTCTTCCAGGAAATTATTTTCACATATGTCAATATTGGAGACTAGGTCTTCTTTA
GAGTGGTTTGTTAGAAAAGTTCAAGATAAAATTATTTTATGTGCTCTAAGGCAATCTATA
GTAAAGGGAGCAAACAAATCGAGGCATTCCCTTGAGTACTTGGATAGAGATGAGATTATA
GTAGCTCATATGGTAGGGGGAGTTGATGCATATATAAAGGTGTGTCAAGGGTGGCCTGTA
TCAAATAATGCACTGAAGCTTAAATCTCTCAAGAGCTCAGATCAGCAGTCAAAAGGAATT
TCTTTGAGCTTTCTTTGCAAGGTTGAGGAAATGGCAAACTCCTTGGATGTGTCCATACGA
AAAAATATTTCAAGCTTTGTGGATGCCATAGAAGAAATACTTGTGCAGCAAATGCAGTCC
AAGCTCCATGTTGTCGATGTTCCTGGAAAGTGACTCTTTCTCTGCTTCTGAATGGTAAGG
GCAATTTATTGCTGAATCTGATGTATGTGTATATTTAGAATTTGATGTGTAATGTATGTT
TAGAGGGGCCAAAGTGTCAGTAAAATTGCTACAGAAGTTGATCCTTTCCTAGGTTAAACA
GAGCAACAGTCAATCTTTTGTTCCATTGTTGGTAAAGTCACGAAGGATGAATCTCTCCCT
CAAGATTAAGTCGGTGGAAATGAAGCAAAATCAAACTAGTTATACATAGTTATCTACATC
TCTTAGTAGGAACTTATGACTTTTTTATAGTACTTATATCATTAAAAGGTGTTACTTTGG
TATTATCTTTTACTTGAAAATGCACAACATTTTAATTATTTTGAGTTGAATGTATTAAGT
TTGGATTTTAT