Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0029g00470.t01
CDS Infomation

cds chromosome:12X:5:15202187:15223820:1 gene:VIT_05s0029g00470 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTCGCTGCTTTCCGTTTCCGCCTCCAGGGTATGAAAAAAAGGCTAGGACAGATGAT
GCAGACTTACTAAAAAAGGAAAAGCACCGGGAGAAGAAACATAAAAAGGAAAAGAGGGAA
AAAGAGAAGAAAGAAGGTAAAGAAAAAAGGGAGAAAGATCGAGGTGATGGAAGACACAAA
GAGAAGAAAGACAGAAAGGATAAACATAGAGATAGAAAAAAGGATAAGGAAAAGGACAGA
GAAAAAGAAAAAGACAAAAACATTACCTCAGATGAGAAGAGACTTGCATCAGAATTTGAG
GGTTTTAATGCAGAGAAACTCAGTCAAAAAGAGGTCAGGGATAGAGATAAAAATAGTGTC
TCCAATGAGAAGAGATTTGCTGGTCAACTTGTGGGTTACAATGAAGAGAAGCTTACTCAA
AGTAGTCATCTGGGTGAGGGGAATAAGGATTCTAAATTTCTGCAGGAGTTGGGGAGGAGG
ATTAGAGCTGAAGATGGAGGAAATGGGAATCAGTTGGTTGAGAAGTTCACTGGTACAGAT
CGAAGAAAGGATGAGGCGATGGCCAGGTTGGTGGCTAAAGATGTTGGTATTCGGACTGAA
GGGAAGGAAAAGAACAAGGACAAGAGAGGTGAGGATAGAAAGATTGATGGGCAAGGAGTC
AGGGATGAGTCAAGAATTAGTGGAAATTCAGTGGCTCAGAGTCTTACTGGAACTGGTCTT
CATAGGCTTGAAGGAACTCCGAAACCATTGGAGAAGAAGATTGAGAGGAGGATGGAAGCA
AAAGAAAAGACCAAAGACAAGGAAGGTGATGATAAACGAGGAGATAAACGTAAGGATAGA
GATAGAGAGAAAAAAAGTCAAGGGAAGGAGAAAGATAGGGATAAGGAGAAGAGAAAGGAG
GAGAAAGAAAAGGAGAAAATTGAACACAAGAACAAAGAACTGGATAAATCAAAAGAAAGC
AACAAAGATGATGTTACAGTTACCCACAATATCAAAACATCACATCTTCACAAGGACAGC
AACAAGAGTGCTGCTACCGAGGGAAATCACAGGAAACGGAAGGACTCTGACACAAATGGA
TTTTTGCATGTCAATGAAGTTAAGCCTAATAAGTTGCCAAGACCCACTTCTCATCCATTG
ATAGAGAATGGGAGGAAATTGGAACCTTGCCAAACCTCTATTCTGATTACTTCTGATAGG
CAAGGAGGGACTGCTAATAATCTTAAAGTGGAAAATAAGGAGCACAAATTAAATGGTATA
ATAGGAGCTCAGCCATTTTCTGTCGCTTCAACAAAGCCTTTGTCTGTGGCTTCACAAGCT
GACCAAATTGCTGATGCTTCTAAAAAACCGCCCCATCCAGATTCCAAGTATTTAAGTCAG
GTGCTTTTGGTACCCAAAATGGAAGAATGGTCTGATTTTGATGACCAAGAGTGGCTATTT
AGTAGCAGCATTTCCCAGTCAGAGAAACCCAAGATGGGTTCTTCTGGAGGTGATGAGACA
CCTCAAGTATGGGCGGAGGCTCTGCAAGTAGACTCAGCTGATATCTATGCTCTTCCATAT
GTTATTCCTTACTGA

Peptide Sequence

PEP ID

VIT_05s0029g00470.t01
PEP Infomation

pep chromosome:12X:5:15202187:15223820:1 gene:VIT_05s0029g00470 transcript:VIT_05s0029g00470.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSRCFPFPPPGYEKKARTDDADLLKKEKHREKKHKKEKREKEKKEGKEKREKDRGDGRHK
EKKDRKDKHRDRKKDKEKDREKEKDKNITSDEKRLASEFEGFNAEKLSQKEVRDRDKNSV
SNEKRFAGQLVGYNEEKLTQSSHLGEGNKDSKFLQELGRRIRAEDGGNGNQLVEKFTGTD
RRKDEAMARLVAKDVGIRTEGKEKNKDKRGEDRKIDGQGVRDESRISGNSVAQSLTGTGL
HRLEGTPKPLEKKIERRMEAKEKTKDKEGDDKRGDKRKDRDREKKSQGKEKDRDKEKRKE
EKEKEKIEHKNKELDKSKESNKDDVTVTHNIKTSHLHKDSNKSAATEGNHRKRKDSDTNG
FLHVNEVKPNKLPRPTSHPLIENGRKLEPCQTSILITSDRQGGTANNLKVENKEHKLNGI
IGAQPFSVASTKPLSVASQADQIADASKKPPHPDSKYLSQVLLVPKMEEWSDFDDQEWLF
SSSISQSEKPKMGSSGGDETPQVWAEALQVDSADIYALPYVIPY

Transcript Sequence

Transcript ID

VIT_05s0029g00470.t01
Transcript Infomation

cdna chromosome:12X:5:15202187:15223820:1 gene:VIT_05s0029g00470 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAATCCGAATTGCTTGTTTTTGATTGAGGATTTCTGGATTTTTTCCGGTTTCAGCGTGTT
TGATCTTTCAGTAGGGGATGCTTTTGGTATTGGGTTTTGGTTGTAAGAGGGAGGTGATGG
TTCTTTATTGGCCTAGAAGGCAACACAAACGATCAGATTTTACTGGACCGTTTTTGTTTC
TCAGAAAACCTTTTGGGTTAACATAGTTTGAGCATAATCCGTAACCCAAGTGTTTTTATA
GTGATTCCTGCATCTGGGTTCGTTGAGCTTGTTTAGTGTAGTATATTACAGCAAGTTGGA
TCCAACTCCTATCTGTGATGAGCAGTTCTTTTGAATTTGAATTTTGGACAAATCTGCCTC
ATTGTGGAAAGGAGGATTAAGGTGGTTAGCTGTGTGTGGGAGCTTTAGTTTTGAAACACA
TATTGGACAAATTTGACTGACCTGAGTGAACATTTGCGGCAAAGGAAAGTTAAATTTGGT
GGCTTTAGAAATTTACTGATAGCTTTATGGAGGATTATTGAAGCTGGAAATGAATGCGGG
GTCATGGTGCATGGACAGGAGCATAGTTGCTGGTCCGTTTCCTTTTTGGAACAGTACAAC
TGGAAAGTAATTCAAGTCATTTTATGTGTGGAGGGTGCTAGTTTTCTGTATTCAAGATTT
CTGTGCAATGTCTCGCTGCTTTCCGTTTCCGCCTCCAGGGTATGAAAAAAAGGCTAGGAC
AGATGATGCAGACTTACTAAAAAAGGAAAAGCACCGGGAGAAGAAACATAAAAAGGAAAA
GAGGGAAAAAGAGAAGAAAGAAGGTAAAGAAAAAAGGGAGAAAGATCGAGGTGATGGAAG
ACACAAAGAGAAGAAAGACAGAAAGGATAAACATAGAGATAGAAAAAAGGATAAGGAAAA
GGACAGAGAAAAAGAAAAAGACAAAAACATTACCTCAGATGAGAAGAGACTTGCATCAGA
ATTTGAGGGTTTTAATGCAGAGAAACTCAGTCAAAAAGAGGTCAGGGATAGAGATAAAAA
TAGTGTCTCCAATGAGAAGAGATTTGCTGGTCAACTTGTGGGTTACAATGAAGAGAAGCT
TACTCAAAGTAGTCATCTGGGTGAGGGGAATAAGGATTCTAAATTTCTGCAGGAGTTGGG
GAGGAGGATTAGAGCTGAAGATGGAGGAAATGGGAATCAGTTGGTTGAGAAGTTCACTGG
TACAGATCGAAGAAAGGATGAGGCGATGGCCAGGTTGGTGGCTAAAGATGTTGGTATTCG
GACTGAAGGGAAGGAAAAGAACAAGGACAAGAGAGGTGAGGATAGAAAGATTGATGGGCA
AGGAGTCAGGGATGAGTCAAGAATTAGTGGAAATTCAGTGGCTCAGAGTCTTACTGGAAC
TGGTCTTCATAGGCTTGAAGGAACTCCGAAACCATTGGAGAAGAAGATTGAGAGGAGGAT
GGAAGCAAAAGAAAAGACCAAAGACAAGGAAGGTGATGATAAACGAGGAGATAAACGTAA
GGATAGAGATAGAGAGAAAAAAAGTCAAGGGAAGGAGAAAGATAGGGATAAGGAGAAGAG
AAAGGAGGAGAAAGAAAAGGAGAAAATTGAACACAAGAACAAAGAACTGGATAAATCAAA
AGAAAGCAACAAAGATGATGTTACAGTTACCCACAATATCAAAACATCACATCTTCACAA
GGACAGCAACAAGAGTGCTGCTACCGAGGGAAATCACAGGAAACGGAAGGACTCTGACAC
AAATGGATTTTTGCATGTCAATGAAGTTAAGCCTAATAAGTTGCCAAGACCCACTTCTCA
TCCATTGATAGAGAATGGGAGGAAATTGGAACCTTGCCAAACCTCTATTCTGATTACTTC
TGATAGGCAAGGAGGGACTGCTAATAATCTTAAAGTGGAAAATAAGGAGCACAAATTAAA
TGGTATAATAGGAGCTCAGCCATTTTCTGTCGCTTCAACAAAGCCTTTGTCTGTGGCTTC
ACAAGCTGACCAAATTGCTGATGCTTCTAAAAAACCGCCCCATCCAGATTCCAAGTATTT
AAGTCAGGTGCTTTTGGTACCCAAAATGGAAGAATGGTCTGATTTTGATGACCAAGAGTG
GCTATTTAGTAGCAGCATTTCCCAGTCAGAGAAACCCAAGATGGGTTCTTCTGGAGGTGA
TGAGACACCTCAAGTATGGGCGGAGGCTCTGCAAGTAGACTCAGCTGATATCTATGCTCT
TCCATATGTTATTCCTTACTGATTGGTTTTGAAAACGGCATGATTCACCCGTCTATTCTA
TCCAAGGCAGTGGGCCCTCTCTTCAAGGAAGAAAATATGGAAGGTATGGCCATGTCTGGC
TTGTTGGGAAGGATTTTCTGGTTTTATTGTTGCATTCTTTTGTTATTACGCTCCTCTGTT
GCAGGAAGTATCGAGTGTGACTGGATTTGCCTTGATCTGAAATTGTTTTGTACGGAAACA
AAAATCTGTCACAGATGATTGCTTGCTCTTCGGTAGGTTGGGTGCATCTTTGCAGGGCTA
TAGGATTAGAGGGGGTGCGGTTTTTTGCTCCTTGGATGGAACAACAACTAATTCATTCAA
AATGGAAAATCCCATAAGGTCCCAAAAAAGGCAACTGAGGGAGTGTTGCTTACAAAGGGA
GAAGATATAAAGCTTGTGCAATTTTTATTCTATTTGTTTTGAAGCTGAGAAACCATCTAA
TTGAGAGTGTGAGAGGGAAACTAGCTGTGGTCTTTGCAACTCCACCACAATTTTGATTTG
TAACATAGAACTCTTCTTATTTACAAGAAATGTAAGATAGAGGGAAAATGAAAGTGGTAG
TCTCATTCATTGA