Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g04690.t01
CDS Infomation

cds chromosome:12X:5:6548370:6550556:1 gene:VIT_05s0020g04690 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F6HDY1]
Sequence

ATGGAAGTTGGCCGGAAAATGTCGAGCATGCTCGGGGCTGAGCGTGGTTTTGATTTCAAA
GAGACTGAACTCTGTCTGGGGCTGCCTGGTGGAGGTGGAGGTGAAGCCGAGACGCTTAAG
GCTTCTGGCAAGAGGGGGTTCTCCGAGACTGTTGATCTCAAACTCAACCTTCAGTCCAAG
GAATCAGTAGTGGATCTGAACGAGAATGTCAAGTGTCCACCCAAGGAGAAGAACCTCCTT
CCTTGCACCAAGGATCCGGCCAAACCACCTGCCAAGGCACAGGTGGTGGGTTGGCCACCA
GTTCGATCATTTAGGAAGAACATAATGGCTCAGAAGAACAGCAGCGAGGAGGGTGAGAAG
GGAAGCAGCGGTGCTGCATTCGTGAAGGTTTGCATGGATGGCGCGCCATATCTTCGCAAG
GTGGACTTAAAGATGTACAAGAGCTACCAAGAACTCTCTGATGCATTAGGCAAGATGTTC
AGTTCCTTCACCATGGGCAACTATGGGGCCCAGGGAATGATAGATTTTATGAATGAGAGC
AAGTTGATGGATCTTTTGAACAGCTCTGAATATGTTCCAACCTATGAAGATAAGGATGGA
GACTGGATGCTCGTGGGTGATGTTCCATGGGAGATGTTTGTTGATTCATGCAAGCGCTTG
CGTATAATGAAAGGATCAGAAGCAATTGGTCTTGCACCAAGAGCAATGGAGAAGTGTAAG
AATAGATGCTGA

Peptide Sequence

PEP ID

VIT_05s0020g04690.t01
PEP Infomation

pep chromosome:12X:5:6548370:6550556:1 gene:VIT_05s0020g04690 transcript:VIT_05s0020g04690.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F6HDY1]
Sequence

MEVGRKMSSMLGAERGFDFKETELCLGLPGGGGGEAETLKASGKRGFSETVDLKLNLQSK
ESVVDLNENVKCPPKEKNLLPCTKDPAKPPAKAQVVGWPPVRSFRKNIMAQKNSSEEGEK
GSSGAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTMGNYGAQGMIDFMNES
KLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCK
NRC

Transcript Sequence

Transcript ID

VIT_05s0020g04690.t01
Transcript Infomation

cdna chromosome:12X:5:6548370:6550556:1 gene:VIT_05s0020g04690 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F6HDY1]
Sequence

ATCAAGAAGAAGAGTAGGGAGAAAGAGGAAGAAGGAGAAGCAAAGAGAGAAGATAGCCAT
CATCATCAACGACTAGAATAGAGCAAGGTTTCCCCGGAGATTCCATGGAAGTTGGCCGGA
AAATGTCGAGCATGCTCGGGGCTGAGCGTGGTTTTGATTTCAAAGAGACTGAACTCTGTC
TGGGGCTGCCTGGTGGAGGTGGAGGTGAAGCCGAGACGCTTAAGGCTTCTGGCAAGAGGG
GGTTCTCCGAGACTGTTGATCTCAAACTCAACCTTCAGTCCAAGGAATCAGTAGTGGATC
TGAACGAGAATGTCAAGTGTCCACCCAAGGAGAAGAACCTCCTTCCTTGCACCAAGGATC
CGGCCAAACCACCTGCCAAGGCACAGGTGGTGGGTTGGCCACCAGTTCGATCATTTAGGA
AGAACATAATGGCTCAGAAGAACAGCAGCGAGGAGGGTGAGAAGGGAAGCAGCGGTGCTG
CATTCGTGAAGGTTTGCATGGATGGCGCGCCATATCTTCGCAAGGTGGACTTAAAGATGT
ACAAGAGCTACCAAGAACTCTCTGATGCATTAGGCAAGATGTTCAGTTCCTTCACCATGG
GCAACTATGGGGCCCAGGGAATGATAGATTTTATGAATGAGAGCAAGTTGATGGATCTTT
TGAACAGCTCTGAATATGTTCCAACCTATGAAGATAAGGATGGAGACTGGATGCTCGTGG
GTGATGTTCCATGGGAGATGTTTGTTGATTCATGCAAGCGCTTGCGTATAATGAAAGGAT
CAGAAGCAATTGGTCTTGCACCAAGAGCAATGGAGAAGTGTAAGAATAGATGCTGAACCA
GCACAGCCTCGTACAAGTTCAGCATCCATGAAGCCTAGAAGATAAAGCTAGCAGCACTGT
GTTCAAGCTTTGATTGATGAGGATGTTGTTTGGATGTGTCTGTATTTTTATTTGATGGTA
TATAATTATCAAAGATCTGGGCATTTGTAATGGACAAGAAGCAATAAACGTAGCTATTGT
TTGGCTTGTTTATTACTAATAGGTTGTCTAATAAT