Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g04680.t01
CDS Infomation

cds chromosome:12X:5:6536583:6537443:-1 gene:VIT_05s0020g04680 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F6HDY0]
Sequence

ATGGAAGGTGCTGTGGCATATGAGAGCGATCTGAACTTGAAGGCAACCGAGCTTAGACTG
GGGTTGCCGGGAAGGGATGAGGCTGAGAAAGAAGCACTTTCTGGTGTTAGAAACAACAAG
AGAGCGTCGCCTGACACAAGTGATGAGTGTGGATCCAAGGGAAGTTCTAATGGTGATCGT
GAAAATGCTCCTGCCACGAAGGCACAAGTTGTAGGGTGGCCACCAATCCGATCCTTTCGG
AAAAATAGCTTCCAACCGAAGAAGACTGAGGCGGAGGCTGCTGGAATGTTCGTGAAAGTA
AGCATGGATGGAGCTCCTTACCTCAGAAAGATTGATCTGAAGGTTTACAAAGGCTATCCG
GAGCTCCTTCAGGCTCTACAGAATATGTTCAAATTCACCATAGGTGATTATTCAGAGAGA
GAGGGCTACAAGGGATCAGAATATGTACCCACTTATGAAGACAAAGACGGTGACTGGATG
CTGGTTGGCGATGTTCCATGGGAGTAA

Peptide Sequence

PEP ID

VIT_05s0020g04680.t01
PEP Infomation

pep chromosome:12X:5:6536583:6537443:-1 gene:VIT_05s0020g04680 transcript:VIT_05s0020g04680.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F6HDY0]
Sequence

MEGAVAYESDLNLKATELRLGLPGRDEAEKEALSGVRNNKRASPDTSDECGSKGSSNGDR
ENAPATKAQVVGWPPIRSFRKNSFQPKKTEAEAAGMFVKVSMDGAPYLRKIDLKVYKGYP
ELLQALQNMFKFTIGDYSEREGYKGSEYVPTYEDKDGDWMLVGDVPWE

Transcript Sequence

Transcript ID

VIT_05s0020g04680.t01
Transcript Infomation

cdna chromosome:12X:5:6536583:6537443:-1 gene:VIT_05s0020g04680 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:F6HDY0]
Sequence

GAATCCTCCATAACTCGCCGGGATCCTCTTCCAATACGTCCTCTCTGTACAACTCTATAT
AAGATAACTGAGGTTTGCTTCTATCTGAGAGAATATATTTGTATTGCTTTTACTTGGAAG
ATTGAAAATGGAAGGTGCTGTGGCATATGAGAGCGATCTGAACTTGAAGGCAACCGAGCT
TAGACTGGGGTTGCCGGGAAGGGATGAGGCTGAGAAAGAAGCACTTTCTGGTGTTAGAAA
CAACAAGAGAGCGTCGCCTGACACAAGTGATGAGTGTGGATCCAAGGGAAGTTCTAATGG
TGATCGTGAAAATGCTCCTGCCACGAAGGCACAAGTTGTAGGGTGGCCACCAATCCGATC
CTTTCGGAAAAATAGCTTCCAACCGAAGAAGACTGAGGCGGAGGCTGCTGGAATGTTCGT
GAAAGTAAGCATGGATGGAGCTCCTTACCTCAGAAAGATTGATCTGAAGGTTTACAAAGG
CTATCCGGAGCTCCTTCAGGCTCTACAGAATATGTTCAAATTCACCATAGGTGATTATTC
AGAGAGAGAGGGCTACAAGGGATCAGAATATGTACCCACTTATGAAGACAAAGACGGTGA
CTGGATGCTGGTTGGCGATGTTCCATGGGAGTAA