Plant GARDEN
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g04390.t01
CDS Infomation

cds chromosome:12X:5:6153306:6156571:-1 gene:VIT_05s0020g04390 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDV6]
Sequence

ATGTCCAATATTTTGCATGTTAACTTAAATTGCATAACGCCCATACTCGATTTGCCAACC
ACCCTTAGCAAACCCAACAAGCGATGGCACTCGGCCTTTGCTACTATCTATTGTTTCAGG
GCTTTACATTCTCTTCTCAATAAGAAGAAGAATAGCAGCAAAGTTCCAATATCTACTCCT
TCCTTTGTTGTCCTTAATGTTAAGCCCGATGCCTTCTCAAGCATTGATCAGACAACTCTC
AATGCAATTGTGAAGGGGAAAAACTTAAACCTGCTTCTTGAATCTGGAGGAGTTGAAGGC
GTGGCTGATGCTCTAGAAACAGATATCAAAAATGGCATCAGTGGTGCTGTTGACGATGTT
GCTCTCAGACAGGAAGCTTTCGGTTCAAACACATACAAGAGGCCGCCTGCTAAAAGCTTA
TTCCACTTCGTGGTGGAAGCTTTTAAGGACGTCACCATTCTCATACTTCTATTTTGCGCC
GCACTGTCTCTCGGTTTTGGAATTAAAGAGCATGGGCTGAAGGAAGGGTGGTATGATGGT
GGAAGCATATTTGTAGCCGTCATTCTAGTCATTTCTGTCTCTGCTGTGAGTAACTTCAGG
CAAAACAGACAGTTCGAAAAGTTGTCTAAAGTCAGCAACAATATCAAAGTTGATGTTTTC
AGAAATGGGCGCCGTCAGCAGATCTCTATATTTGAAATAGTCGTTGGAGATGTTGTTAGC
TTAAAAATCGGTGACCAAGTTCCTGCCGATGGGTTGTTCTTGGATGGGCATTCACTACAA
GTGGATGAATCCAGCATGACCGGGGAGAGTGACCATGTTGAAGTTAATAGCAGCCATAAT
CCATTTTTGTTTTCTGGAACCAAAGTGGCTGATGGATATGCTCAAATGCTTGTGACATCT
GTTGGTATGAACACAACATGGGGCCAGATGATGAGCACAATCAGCCGCGACACTAATGAA
CAAACACCATTACAAGCCAGGCTCAACAAACTTACCTCATCAATAGGTAAGGCTGGTTTG
GCAGTTGCTTTTCTAGTTCTTGTAGTGTTGTTGGTTCGCTATTTCACTGGGAATACAGAA
GATGAGAATGGAAATCAGGAGTTCAATGGCAGCAAAACAAAGGCTGATGATATAGTAAAT
GCTGTGGTCGCAATCATTGCTGCTGCAGTTACCATTGTGGTTGTTGCAATTCCAGAAGGC
CTGCCGTTGGCTGTCACACTCACTCTTGCTTATTCAATGAAGAGAATGATGGCTGACCAG
GCTATGGTTCGGAAGCTCTCTGCCTGTGAGACCATGGGCTCTGCCACCACAATTTGTACT
GACAAAACAGGTACTCTCACTATGAACCAGATGAAGGTGACAAAGATTTGGCTTGGCCAA
GAACCTATTGAAGTTTCCTCTTCAATTTCAACAAATCTTCTCAACCTCATCCAACAAGGA
GTTGCCCTGAACACAACTGGTAGCGTTTACAAGGCTAGTTCGGGATCTTCTAAGTTCGAG
TTCTCTGGTAGTCCAACTGAAAAAGCAATTCTTTCATGGGCTGTACTGGAACTTGATATG
GACATGGAGATATTGAAGCAGAATTGTACCATTCTCCATGTTGAAGCCTTCAATTCGGAG
AAGAAAAGAAGTGGGGTTTTAGTGAGGAGTAAGGCTGATGACACAATCAACGTGCACTGG
AAGGGAGCTGCAGAGATGATACTAGCAATGTGTTCGAGTTACTATGATGCTTCTGGAAGC
ACGAAAGATATGGATGATGGTGAACGGATGACATTTGAGCAAATAATTCAAGGTATGGCC
GCTAGTAGCCTCCGCTGCATTGCTTTTGCACATAAACAGATTCCAGAGGAAAAACATGAA
ATTAGAGAAGCCACCCAAAAGCTAAAAGAAGATGGCTTGACCCTTATAGGACTGGTAGGG
ATAAAGGACCCGTGTAGACCAGGGGTGAGAAAAGCTGTGGAAGATTGCCAATATGCTGGA
GTGAATGTGAAAATGATCACTGGTGATAATGTTTTCACTGCAAGAGCCATAGCCACTGAA
TGTGGAATACTAAGACCTGATCAAGGCATAGACAATGAGGCAGTGGTAGAAGGTGAGGTA
TTTCGGAAGTACACCCCAGAAGAGAGAATGGAGAAAGTTGATAAAATTCGTGTGATGGCT
AGATCCTCTCCCTTTGATAAACTTCTCATGGTACAGTGCTTGAAACAGAAAGGTCATGTG
GTTGCAGTCACAGGTGATGGCACAAATGATGCACCAGCATTAAAAGAAGCCGACATAGGA
CTTTCTATGGGGATACAGGGCACTGAAGTGGCCAAACAGAGCTCAGATATCATCATCTTG
GATGATAATTTTGCTTCTGTAGCAACAGTTTTAAGGTGGGGAAGGTGTGTGTATAACAAC
ATTCAGAAATTCATCCAGTTCCAGCTTACAGTGAATGTTGCAGCCCTTGTAATCAACTTT
GTAGCAGCAGTTTCAGCTGGCGAGGTCCCCTTAACAGCAGTGCAATTATTGTGGGTAAAC
TTGATCATGGATACACTAGGTGCTCTTGCTCTCTCCACAGAGCAACCCACCAAGGGGCTA
ATGGATAGACCACCTGTGGGTCGGACGGAGCCACTTATCACCAACATCATGTGGAGGAAT
TTACTAGCCCAAGCATTGTATCAGATAGCTGTCCTCTTGACCTTACAATTCAAAGGAGAA
TCAATCTTTGGTGTGAACGAGAAGGTAAAGGACACCTTGATATTCAATACTTTCGTACTG
TGCCAGGTCTTCAATGAATTCAATGCAAGGAAGCTGGAGAAGAAGAATGTGTTTGAAGGG
ATACATAAAAACAAGTTGTTTTTGGGGATCATTGGGATAACCATTATTCTTCAGGTGGTT
ATGGTGGAATTTTTGAAGAAGTTTGCAGATACGGAGAGGCTGAATTGGGGACAATGGGGT
GCATGCCTTGGAATTGCAGCAGTATCTTGGCCACTCGGTTGGGTTGTCAAGTGCATACAT
GTCTCAAATAAACCATTTCTCAGCTATCTAAAGTGGTAG

Peptide Sequence

PEP ID

VIT_05s0020g04390.t01
PEP Infomation

pep chromosome:12X:5:6153306:6156571:-1 gene:VIT_05s0020g04390 transcript:VIT_05s0020g04390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDV6]
Sequence

MSNILHVNLNCITPILDLPTTLSKPNKRWHSAFATIYCFRALHSLLNKKKNSSKVPISTP
SFVVLNVKPDAFSSIDQTTLNAIVKGKNLNLLLESGGVEGVADALETDIKNGISGAVDDV
ALRQEAFGSNTYKRPPAKSLFHFVVEAFKDVTILILLFCAALSLGFGIKEHGLKEGWYDG
GSIFVAVILVISVSAVSNFRQNRQFEKLSKVSNNIKVDVFRNGRRQQISIFEIVVGDVVS
LKIGDQVPADGLFLDGHSLQVDESSMTGESDHVEVNSSHNPFLFSGTKVADGYAQMLVTS
VGMNTTWGQMMSTISRDTNEQTPLQARLNKLTSSIGKAGLAVAFLVLVVLLVRYFTGNTE
DENGNQEFNGSKTKADDIVNAVVAIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQ
AMVRKLSACETMGSATTICTDKTGTLTMNQMKVTKIWLGQEPIEVSSSISTNLLNLIQQG
VALNTTGSVYKASSGSSKFEFSGSPTEKAILSWAVLELDMDMEILKQNCTILHVEAFNSE
KKRSGVLVRSKADDTINVHWKGAAEMILAMCSSYYDASGSTKDMDDGERMTFEQIIQGMA
ASSLRCIAFAHKQIPEEKHEIREATQKLKEDGLTLIGLVGIKDPCRPGVRKAVEDCQYAG
VNVKMITGDNVFTARAIATECGILRPDQGIDNEAVVEGEVFRKYTPEERMEKVDKIRVMA
RSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKQSSDIIIL
DDNFASVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVN
LIMDTLGALALSTEQPTKGLMDRPPVGRTEPLITNIMWRNLLAQALYQIAVLLTLQFKGE
SIFGVNEKVKDTLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNKLFLGIIGITIILQVV
MVEFLKKFADTERLNWGQWGACLGIAAVSWPLGWVVKCIHVSNKPFLSYLKW

Transcript Sequence

Transcript ID

VIT_05s0020g04390.t01
Transcript Infomation

cdna chromosome:12X:5:6153306:6156571:-1 gene:VIT_05s0020g04390 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDV6]
Sequence

CCCTGTAAGCTATAATTCTAATTTCCTTCCTTCTCTGTTCTTCAATTTGCATTTTTGTCA
AACAGTTTGTCTTTATTCCGCCGCATCATTGTTACATACTCTTTTGTCTTTCACAAAGCA
TGTCCAATATTTTGCATGTTAACTTAAATTGCATAACGCCCATACTCGATTTGCCAACCA
CCCTTAGCAAACCCAACAAGCGATGGCACTCGGCCTTTGCTACTATCTATTGTTTCAGGG
CTTTACATTCTCTTCTCAATAAGAAGAAGAATAGCAGCAAAGTTCCAATATCTACTCCTT
CCTTTGTTGTCCTTAATGTTAAGCCCGATGCCTTCTCAAGCATTGATCAGACAACTCTCA
ATGCAATTGTGAAGGGGAAAAACTTAAACCTGCTTCTTGAATCTGGAGGAGTTGAAGGCG
TGGCTGATGCTCTAGAAACAGATATCAAAAATGGCATCAGTGGTGCTGTTGACGATGTTG
CTCTCAGACAGGAAGCTTTCGGTTCAAACACATACAAGAGGCCGCCTGCTAAAAGCTTAT
TCCACTTCGTGGTGGAAGCTTTTAAGGACGTCACCATTCTCATACTTCTATTTTGCGCCG
CACTGTCTCTCGGTTTTGGAATTAAAGAGCATGGGCTGAAGGAAGGGTGGTATGATGGTG
GAAGCATATTTGTAGCCGTCATTCTAGTCATTTCTGTCTCTGCTGTGAGTAACTTCAGGC
AAAACAGACAGTTCGAAAAGTTGTCTAAAGTCAGCAACAATATCAAAGTTGATGTTTTCA
GAAATGGGCGCCGTCAGCAGATCTCTATATTTGAAATAGTCGTTGGAGATGTTGTTAGCT
TAAAAATCGGTGACCAAGTTCCTGCCGATGGGTTGTTCTTGGATGGGCATTCACTACAAG
TGGATGAATCCAGCATGACCGGGGAGAGTGACCATGTTGAAGTTAATAGCAGCCATAATC
CATTTTTGTTTTCTGGAACCAAAGTGGCTGATGGATATGCTCAAATGCTTGTGACATCTG
TTGGTATGAACACAACATGGGGCCAGATGATGAGCACAATCAGCCGCGACACTAATGAAC
AAACACCATTACAAGCCAGGCTCAACAAACTTACCTCATCAATAGGTAAGGCTGGTTTGG
CAGTTGCTTTTCTAGTTCTTGTAGTGTTGTTGGTTCGCTATTTCACTGGGAATACAGAAG
ATGAGAATGGAAATCAGGAGTTCAATGGCAGCAAAACAAAGGCTGATGATATAGTAAATG
CTGTGGTCGCAATCATTGCTGCTGCAGTTACCATTGTGGTTGTTGCAATTCCAGAAGGCC
TGCCGTTGGCTGTCACACTCACTCTTGCTTATTCAATGAAGAGAATGATGGCTGACCAGG
CTATGGTTCGGAAGCTCTCTGCCTGTGAGACCATGGGCTCTGCCACCACAATTTGTACTG
ACAAAACAGGTACTCTCACTATGAACCAGATGAAGGTGACAAAGATTTGGCTTGGCCAAG
AACCTATTGAAGTTTCCTCTTCAATTTCAACAAATCTTCTCAACCTCATCCAACAAGGAG
TTGCCCTGAACACAACTGGTAGCGTTTACAAGGCTAGTTCGGGATCTTCTAAGTTCGAGT
TCTCTGGTAGTCCAACTGAAAAAGCAATTCTTTCATGGGCTGTACTGGAACTTGATATGG
ACATGGAGATATTGAAGCAGAATTGTACCATTCTCCATGTTGAAGCCTTCAATTCGGAGA
AGAAAAGAAGTGGGGTTTTAGTGAGGAGTAAGGCTGATGACACAATCAACGTGCACTGGA
AGGGAGCTGCAGAGATGATACTAGCAATGTGTTCGAGTTACTATGATGCTTCTGGAAGCA
CGAAAGATATGGATGATGGTGAACGGATGACATTTGAGCAAATAATTCAAGGTATGGCCG
CTAGTAGCCTCCGCTGCATTGCTTTTGCACATAAACAGATTCCAGAGGAAAAACATGAAA
TTAGAGAAGCCACCCAAAAGCTAAAAGAAGATGGCTTGACCCTTATAGGACTGGTAGGGA
TAAAGGACCCGTGTAGACCAGGGGTGAGAAAAGCTGTGGAAGATTGCCAATATGCTGGAG
TGAATGTGAAAATGATCACTGGTGATAATGTTTTCACTGCAAGAGCCATAGCCACTGAAT
GTGGAATACTAAGACCTGATCAAGGCATAGACAATGAGGCAGTGGTAGAAGGTGAGGTAT
TTCGGAAGTACACCCCAGAAGAGAGAATGGAGAAAGTTGATAAAATTCGTGTGATGGCTA
GATCCTCTCCCTTTGATAAACTTCTCATGGTACAGTGCTTGAAACAGAAAGGTCATGTGG
TTGCAGTCACAGGTGATGGCACAAATGATGCACCAGCATTAAAAGAAGCCGACATAGGAC
TTTCTATGGGGATACAGGGCACTGAAGTGGCCAAACAGAGCTCAGATATCATCATCTTGG
ATGATAATTTTGCTTCTGTAGCAACAGTTTTAAGGTGGGGAAGGTGTGTGTATAACAACA
TTCAGAAATTCATCCAGTTCCAGCTTACAGTGAATGTTGCAGCCCTTGTAATCAACTTTG
TAGCAGCAGTTTCAGCTGGCGAGGTCCCCTTAACAGCAGTGCAATTATTGTGGGTAAACT
TGATCATGGATACACTAGGTGCTCTTGCTCTCTCCACAGAGCAACCCACCAAGGGGCTAA
TGGATAGACCACCTGTGGGTCGGACGGAGCCACTTATCACCAACATCATGTGGAGGAATT
TACTAGCCCAAGCATTGTATCAGATAGCTGTCCTCTTGACCTTACAATTCAAAGGAGAAT
CAATCTTTGGTGTGAACGAGAAGGTAAAGGACACCTTGATATTCAATACTTTCGTACTGT
GCCAGGTCTTCAATGAATTCAATGCAAGGAAGCTGGAGAAGAAGAATGTGTTTGAAGGGA
TACATAAAAACAAGTTGTTTTTGGGGATCATTGGGATAACCATTATTCTTCAGGTGGTTA
TGGTGGAATTTTTGAAGAAGTTTGCAGATACGGAGAGGCTGAATTGGGGACAATGGGGTG
CATGCCTTGGAATTGCAGCAGTATCTTGGCCACTCGGTTGGGTTGTCAAGTGCATACATG
TCTCAAATAAACCATTTCTCAGCTATCTAAAGTGGTAGGAATTTCACTCTTAAGGATATC
AATTATCATTCTGTTGTGATTTAGTCATGTATCACATCTGTTAATTTTTTTTCCGTTATG
AAGCTTAATGTCTATGTAGCTAGGCA