Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_05s0020g04380.t01
CDS Infomation	cds chromosome:12X:5:6140681:6143903:-1 gene:VIT_05s0020g04380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDV5]
Sequence	ATGTCCAGTATTTTGCATGTTAACTTAAATTGCATAGAGTCCATACTCGATGTGCCAAGC ACCCTTAGCAAACCCAACAAGCGATGGCACTTAGCCTTTGCTACTATCTATTGTGCCAGG GTTTTACATTCTCTTCTCAATGAGAAGAAGAATAGCAGCAAACTTCCAGTTGCTACTCCT TCCTTTGTTGTCCTCAATGTTAAGCCCGATGCCTTCTCAAGCATTGATCAGACAACTCTC ACTGAAATTGTGAAGGAGAAAAACTTAAAACTGCTTCTTGAATCTGGAGGAGTTGAAGGC GTGGCTGATGCTCTAGAAACAGATATCAAAAATGGCATCAGTGGTGCTGTTGACGATGTT GCTCTCAGACAGGAAGCTTTCGGTTCAAACACATACAAGAGGCCGCCCACTAAAAGCTTA TTCCACTTCGTGGTGGAAGCTTTTAAGGATCTTACCATTCTCATACTTCTATTTTGTGCC GCGCTGTCTCTCGGTTTTGGAATTAAAGAGCATGGGCTGAAGGAAGGGTGGTATGATGGT GGAAGCATATTTGTAGCCGTCATTCTAGTCATTTCTGTCTCTGCTGTGAGCAACTTCAGG CAAAACAGACAGTTCGAAAAGTTGTCTAAAGTCAGCAACAATATCAAAATTGATGTTTTC AGAAATGGGCGCCGTCAGCAGATCTCTATATTTGAAATAGTCGTTGGAGATGTTGTTAGC TTAAAAATCGGTGACCAAGTTCCTGCCGATGGGTTGTTCTTGGATGGGCATTCACTACAA GTGGATGAATCCAGCATGACTGGGGAGAGTGACCATGTTGAAGTTAATAGCAGCCATAAT CCATTTTTGTTTTCTGGAACCAAAGTGGCAGATGGATATGCTCAAATGCTTGTGACATCT GTTGGTATGAACACAACATGGGGCCAGATGATGAGCACAATCAGCCGCGACACTAATGAA CAAACACCATTACAAGCCAGGCTCAACAAACTTACCTCATCAATAGGTAAGGCTGGTTTG GCAGTTGCTTTTCTAGTTCTTTTAGTGTTGTTGGTTCGCTATTTCACTGGGAATACAGAA GATGAGAATGGAAATCAGGAGTTCAATGGCAGCAAAACAAAGGCTGATGATATAGTGAAT GCTGTGGTCGAAATCATTGCTACTGCAGTTACCATTGTGGTTGTTGCAATTCCGGAAGGC CTGCCATTGGCTGTCACACTCACTCTTGCTTATTCAATGAAGAGAATGATGGCTGACCAG GCTATGGTTCGAAAGCTCTCTGCCTGTGAGACCATGGGCTCTGCCACCACAATTTGTACT GACAAAACAGGTACTCTCACTATGAACCAGATGAAGGTGACAAAGATTTGGCTTGGCCAA GAACCTATTGAAGTTTCCTCTTCAATTTCAGAAAATCTTCTTAACCTTATCCAACAAGGA GTTGCTTTGAACACAACTGGTAGCGTTTACAGGGCTACCTCAGGATCTTATAAGTTCGAG TTCTTTGGTAGTCCAACTGAAAAAGCAATTCTTTCATGGGCTGTACTGGAACTTGATATG GACATGGAGATACTGAAGCAGAATTGTACAATTCTCCATGTTGAAGCCTTCAATTCGGAG AAGAAAAGAAGTGGGGTTTCAATAAGGAGTAAGGCTGATAACACAATCCACGTGCACTGG AAGGGAGCTGCAGAGATGATACTAGCAATGTGTTCGAGTTATTATGATGCTTCTGGAAGC ATGAAAGATCTGGATGATTGTGAACGAAAGACATTTGAGCAAATAATTCAAGGTATGGCT GCTAGCAGCCTCCGCTGCATTGCTTTTGCACATAAACAGATTCTAGAGGAAGAACATGAA ATTAGAGAAGCCACCCAAAAGCTAAAAGAAGATGGCTTGGCCTTTGTAGGACTGGTAGGG ATTAAGGACCCATGTAGACCAGGGGTGAGAAAAGCTGTGGAAGATTGCCAACATGCGGGA GTGAATGTGAAAATGATCACTGGTGATAATGTTTTCACTGCAAGAGCCATAGCCACTGAA TGTGGAATACTAAGACCTGATCAAGGCATAAACAATGAGGCAGTGGTAGAAGGTGAGGTA TTTCGGAATTACACCCCAGAAGAGAGAATGGAGAAAGTTGACAAAATTCGTGTGATGGCT AGATCCTCTCCCTTTGATAAACTTCTTATGGTACAGTGCTTGAAACAGAATGGTCATGTG GTTGCAGTCACAGGTGATGGCACAAATGATGCACCAGCATTAAAAGAAGCCGACATAGGA CTTTCTATGGGGATACAGGGCACTGAAGTGGCCAAAGAGAGCTCAGATATCATCATCTTG GATGATAATTTTGCTTCGGTAGCAACAGTTTTGAGGTGGGGAAGGTGTGTTTATAACAAC ATTCAGAAATTCATCCAGTTCCAGCTTACAGTGAATGTTGCAGCTCTTGTAATCAACTTT GTAGCAGCAGTTTCAGCTGGTGAGGTCCCCTTAACAGCAGTGCAATTATTGTGGGTAAAC TTGATCATGGATACACTAGGTGCACTTGCTCTCGCCACAGAGCAACCCACCAATGAGCTC ATGGATAGACCACCTGTGGGTCGGACGGGGCCACTTATCACCAACATCATGTGGAGGAAT TTACTAGCCCAAGCAATGTATCAGATAGCTGTCCTCTTGACCTTACAATTCAAAGGAGAA TCAATCTTTGGTGTGAGCGAGAAGGTAAAGGACACCTTGATATTCAATACTTTCGTACTG TGCCAGGTCTTCAATGAATTCAATGCAAGGAGGCTTGAGAAAAAGAATGTGTTTGAAGGG ATACATAAAAACAAGTTGTTTTTGGGGATCATTGGGATAACCATTATCCTTCAAGTGGTT ATGGTGGAATTTTTGAAGAAATTTGCAGATACGGAGAGGTTGAATTGGGGACAATGGGGT GCCTGCCTTGGAATTGCAGCAGTATCTTGGCCACTTGGTTGGGTTGTCAAGTGCATACCT GTCTCAAATAAACCATTTCTCAGCTATCTAAGGTGGTAG

Peptide Sequence

PEP ID	VIT_05s0020g04380.t01
PEP Infomation	pep chromosome:12X:5:6140681:6143903:-1 gene:VIT_05s0020g04380 transcript:VIT_05s0020g04380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDV5]
Sequence	MSSILHVNLNCIESILDVPSTLSKPNKRWHLAFATIYCARVLHSLLNEKKNSSKLPVATP SFVVLNVKPDAFSSIDQTTLTEIVKEKNLKLLLESGGVEGVADALETDIKNGISGAVDDV ALRQEAFGSNTYKRPPTKSLFHFVVEAFKDLTILILLFCAALSLGFGIKEHGLKEGWYDG GSIFVAVILVISVSAVSNFRQNRQFEKLSKVSNNIKIDVFRNGRRQQISIFEIVVGDVVS LKIGDQVPADGLFLDGHSLQVDESSMTGESDHVEVNSSHNPFLFSGTKVADGYAQMLVTS VGMNTTWGQMMSTISRDTNEQTPLQARLNKLTSSIGKAGLAVAFLVLLVLLVRYFTGNTE DENGNQEFNGSKTKADDIVNAVVEIIATAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQ AMVRKLSACETMGSATTICTDKTGTLTMNQMKVTKIWLGQEPIEVSSSISENLLNLIQQG VALNTTGSVYRATSGSYKFEFFGSPTEKAILSWAVLELDMDMEILKQNCTILHVEAFNSE KKRSGVSIRSKADNTIHVHWKGAAEMILAMCSSYYDASGSMKDLDDCERKTFEQIIQGMA ASSLRCIAFAHKQILEEEHEIREATQKLKEDGLAFVGLVGIKDPCRPGVRKAVEDCQHAG VNVKMITGDNVFTARAIATECGILRPDQGINNEAVVEGEVFRNYTPEERMEKVDKIRVMA RSSPFDKLLMVQCLKQNGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIIL DDNFASVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVN LIMDTLGALALATEQPTNELMDRPPVGRTGPLITNIMWRNLLAQAMYQIAVLLTLQFKGE SIFGVSEKVKDTLIFNTFVLCQVFNEFNARRLEKKNVFEGIHKNKLFLGIIGITIILQVV MVEFLKKFADTERLNWGQWGACLGIAAVSWPLGWVVKCIPVSNKPFLSYLRW

Transcript Sequence

Transcript ID	VIT_05s0020g04380.t01
Transcript Infomation	cdna chromosome:12X:5:6140681:6143903:-1 gene:VIT_05s0020g04380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDV5]
Sequence	ATGTCCAGTATTTTGCATGTTAACTTAAATTGCATAGAGTCCATACTCGATGTGCCAAGC ACCCTTAGCAAACCCAACAAGCGATGGCACTTAGCCTTTGCTACTATCTATTGTGCCAGG GTTTTACATTCTCTTCTCAATGAGAAGAAGAATAGCAGCAAACTTCCAGTTGCTACTCCT TCCTTTGTTGTCCTCAATGTTAAGCCCGATGCCTTCTCAAGCATTGATCAGACAACTCTC ACTGAAATTGTGAAGGAGAAAAACTTAAAACTGCTTCTTGAATCTGGAGGAGTTGAAGGC GTGGCTGATGCTCTAGAAACAGATATCAAAAATGGCATCAGTGGTGCTGTTGACGATGTT GCTCTCAGACAGGAAGCTTTCGGTTCAAACACATACAAGAGGCCGCCCACTAAAAGCTTA TTCCACTTCGTGGTGGAAGCTTTTAAGGATCTTACCATTCTCATACTTCTATTTTGTGCC GCGCTGTCTCTCGGTTTTGGAATTAAAGAGCATGGGCTGAAGGAAGGGTGGTATGATGGT GGAAGCATATTTGTAGCCGTCATTCTAGTCATTTCTGTCTCTGCTGTGAGCAACTTCAGG CAAAACAGACAGTTCGAAAAGTTGTCTAAAGTCAGCAACAATATCAAAATTGATGTTTTC AGAAATGGGCGCCGTCAGCAGATCTCTATATTTGAAATAGTCGTTGGAGATGTTGTTAGC TTAAAAATCGGTGACCAAGTTCCTGCCGATGGGTTGTTCTTGGATGGGCATTCACTACAA GTGGATGAATCCAGCATGACTGGGGAGAGTGACCATGTTGAAGTTAATAGCAGCCATAAT CCATTTTTGTTTTCTGGAACCAAAGTGGCAGATGGATATGCTCAAATGCTTGTGACATCT GTTGGTATGAACACAACATGGGGCCAGATGATGAGCACAATCAGCCGCGACACTAATGAA CAAACACCATTACAAGCCAGGCTCAACAAACTTACCTCATCAATAGGTAAGGCTGGTTTG GCAGTTGCTTTTCTAGTTCTTTTAGTGTTGTTGGTTCGCTATTTCACTGGGAATACAGAA GATGAGAATGGAAATCAGGAGTTCAATGGCAGCAAAACAAAGGCTGATGATATAGTGAAT GCTGTGGTCGAAATCATTGCTACTGCAGTTACCATTGTGGTTGTTGCAATTCCGGAAGGC CTGCCATTGGCTGTCACACTCACTCTTGCTTATTCAATGAAGAGAATGATGGCTGACCAG GCTATGGTTCGAAAGCTCTCTGCCTGTGAGACCATGGGCTCTGCCACCACAATTTGTACT GACAAAACAGGTACTCTCACTATGAACCAGATGAAGGTGACAAAGATTTGGCTTGGCCAA GAACCTATTGAAGTTTCCTCTTCAATTTCAGAAAATCTTCTTAACCTTATCCAACAAGGA GTTGCTTTGAACACAACTGGTAGCGTTTACAGGGCTACCTCAGGATCTTATAAGTTCGAG TTCTTTGGTAGTCCAACTGAAAAAGCAATTCTTTCATGGGCTGTACTGGAACTTGATATG GACATGGAGATACTGAAGCAGAATTGTACAATTCTCCATGTTGAAGCCTTCAATTCGGAG AAGAAAAGAAGTGGGGTTTCAATAAGGAGTAAGGCTGATAACACAATCCACGTGCACTGG AAGGGAGCTGCAGAGATGATACTAGCAATGTGTTCGAGTTATTATGATGCTTCTGGAAGC ATGAAAGATCTGGATGATTGTGAACGAAAGACATTTGAGCAAATAATTCAAGGTATGGCT GCTAGCAGCCTCCGCTGCATTGCTTTTGCACATAAACAGATTCTAGAGGAAGAACATGAA ATTAGAGAAGCCACCCAAAAGCTAAAAGAAGATGGCTTGGCCTTTGTAGGACTGGTAGGG ATTAAGGACCCATGTAGACCAGGGGTGAGAAAAGCTGTGGAAGATTGCCAACATGCGGGA GTGAATGTGAAAATGATCACTGGTGATAATGTTTTCACTGCAAGAGCCATAGCCACTGAA TGTGGAATACTAAGACCTGATCAAGGCATAAACAATGAGGCAGTGGTAGAAGGTGAGGTA TTTCGGAATTACACCCCAGAAGAGAGAATGGAGAAAGTTGACAAAATTCGTGTGATGGCT AGATCCTCTCCCTTTGATAAACTTCTTATGGTACAGTGCTTGAAACAGAATGGTCATGTG GTTGCAGTCACAGGTGATGGCACAAATGATGCACCAGCATTAAAAGAAGCCGACATAGGA CTTTCTATGGGGATACAGGGCACTGAAGTGGCCAAAGAGAGCTCAGATATCATCATCTTG GATGATAATTTTGCTTCGGTAGCAACAGTTTTGAGGTGGGGAAGGTGTGTTTATAACAAC ATTCAGAAATTCATCCAGTTCCAGCTTACAGTGAATGTTGCAGCTCTTGTAATCAACTTT GTAGCAGCAGTTTCAGCTGGTGAGGTCCCCTTAACAGCAGTGCAATTATTGTGGGTAAAC TTGATCATGGATACACTAGGTGCACTTGCTCTCGCCACAGAGCAACCCACCAATGAGCTC ATGGATAGACCACCTGTGGGTCGGACGGGGCCACTTATCACCAACATCATGTGGAGGAAT TTACTAGCCCAAGCAATGTATCAGATAGCTGTCCTCTTGACCTTACAATTCAAAGGAGAA TCAATCTTTGGTGTGAGCGAGAAGGTAAAGGACACCTTGATATTCAATACTTTCGTACTG TGCCAGGTCTTCAATGAATTCAATGCAAGGAGGCTTGAGAAAAAGAATGTGTTTGAAGGG ATACATAAAAACAAGTTGTTTTTGGGGATCATTGGGATAACCATTATCCTTCAAGTGGTT ATGGTGGAATTTTTGAAGAAATTTGCAGATACGGAGAGGTTGAATTGGGGACAATGGGGT GCCTGCCTTGGAATTGCAGCAGTATCTTGGCCACTTGGTTGGGTTGTCAAGTGCATACCT GTCTCAAATAAACCATTTCTCAGCTATCTAAGGTGGTAGGAATATCACTCTTAAGGATCT CGATTATCATTCTGTTGTTGTCTGCACAAGGATTTAGTCATATATCACATTTGTTAATTT TCCCGTAGTGAAGCTTAATATCTATGTAGGTAGTGTCAACATCAATAAAATTTTATGACT CTTGTTTTTCTTCCTTTTAATTATGGAGTGCAGTTTTCACAAA