Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g04210.t01
CDS Infomation

cds chromosome:12X:5:5878924:5882879:1 gene:VIT_05s0020g04210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTCCATTTCCACACTCTTCACCAAAACCCCGAACCCATCTCCATCTCTATGTCTC
CCCAGAACCCCCAAGTCCCATTTTACCCCCGCCTTCAGGCTCCCCATTCCTCTCCATTCC
AAGACGAGAACCCACCAGAAGTTACGGGTTTCGTCCGCTTTGATCGAGCCGGACGGTGGC
AAGCTCGTAGAGCTCTTCGTGGAGGAGTCTCTGAGGGATGTGAAGAAGAGAGAAGCCTTG
CGGATGCCCAGAATCAAGCTCTCAAGGATCGATCTTGAGTGGGTTCATGTATTGAGCGAA
GGATGGGCCAGCCCTCTTCGCGGGTTCATGAGAGAATCCGAGTTCCTCCAAACTCTTCAT
TTCAATTCGCTCCGACTCGACGACGGCTCCTTCGTCAACATGTCGGTGCCGATTGTGTTG
GCCATTGATGATGCGGAGAAGCATCAGATTGGTGACTCCACCAAGGTCGCTCTCGTCGAC
TCCAAGGACAATACGATTGCGATTTTAAGCAGTATTGAGATCTACAAGCACCACAAAGAA
GAAAGGATAGCCAGAACTTGGGGGACTACTGCCCCTGGTTTGCCGTATGTGGATCAAGCA
ATAACCAATTCTGGAAACTGGCTGATTGGAGGTGACTTGGAGGTTGTTGAGCCAGTCAAG
TACAATGATGGTCTTGATCGATTTCGACTATCCCCTGCCGAACTCCGTGAAGAATTCACC
AAGCGCAATGCTGATGCAGTGTTTGCTTTCCAGCTCAGGAATCCTGTGCACAATGGTCAT
GCTTTGCTGATGACTGACACACGGCGTCGGCTTCTTGAGATGGGCTACAAGAACCCTGTC
CTCTTACTTCATCCATTAGGAGGCTATACAAAGGCAGATGATGTTCCGCTTGGTTGGAGA
ATGAAGCAACATGAGAAGGTGCTTGAAGATGGGGTTCTTGATCCAGAGACAACTGTAGTT
TCTATTTTCCCATCTCCCATGCACTATGCTGGTCCAACTGAGGTGCAGTGGCATGCAAAG
GCTCGCATTAATGCAGGGGCTAACTTTTACATTGTTGGTCGGGACCCAGCAGGCATGGGC
CACCCAGTTGAGAAGAGAGACTTATATGATGCTGACCATGGGAAGAAGGTATTGAGCATG
GCTCCTGGACTGGAACGGCTAAACATCCTTCCTTTCAAGGTTGCTGCATATGATAAAACT
CAGAATAAAATGGCATTCTTTGATCCCTCAAGGGCTCAAGACTTCCTCTTCATATCTGGC
ACAAAGATGAGAACTCTAGCGAAGAACAAAGAGAACCCTCCAGACGGATTTATGTGCCCG
GGTGGTTGGGAAGTGTTGGTGGAATATTATGACAGTTTGGTGCCCAGCAACAACGGCAAA
GTCCCGGAAACTGTTCCTGCTTAA

Peptide Sequence

PEP ID

VIT_05s0020g04210.t01
PEP Infomation

pep chromosome:12X:5:5878924:5882879:1 gene:VIT_05s0020g04210 transcript:VIT_05s0020g04210.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASISTLFTKTPNPSPSLCLPRTPKSHFTPAFRLPIPLHSKTRTHQKLRVSSALIEPDGG
KLVELFVEESLRDVKKREALRMPRIKLSRIDLEWVHVLSEGWASPLRGFMRESEFLQTLH
FNSLRLDDGSFVNMSVPIVLAIDDAEKHQIGDSTKVALVDSKDNTIAILSSIEIYKHHKE
ERIARTWGTTAPGLPYVDQAITNSGNWLIGGDLEVVEPVKYNDGLDRFRLSPAELREEFT
KRNADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYKNPVLLLHPLGGYTKADDVPLGWR
MKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMG
HPVEKRDLYDADHGKKVLSMAPGLERLNILPFKVAAYDKTQNKMAFFDPSRAQDFLFISG
TKMRTLAKNKENPPDGFMCPGGWEVLVEYYDSLVPSNNGKVPETVPA

Transcript Sequence

Transcript ID

VIT_05s0020g04210.t01
Transcript Infomation

cdna chromosome:12X:5:5878924:5882879:1 gene:VIT_05s0020g04210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACCAGAGCTTGGCCTCCGCTTCCAATGGCGTCCATTTCCACACTCTTCACCAAAACCCC
GAACCCATCTCCATCTCTATGTCTCCCCAGAACCCCCAAGTCCCATTTTACCCCCGCCTT
CAGGCTCCCCATTCCTCTCCATTCCAAGACGAGAACCCACCAGAAGTTACGGGTTTCGTC
CGCTTTGATCGAGCCGGACGGTGGCAAGCTCGTAGAGCTCTTCGTGGAGGAGTCTCTGAG
GGATGTGAAGAAGAGAGAAGCCTTGCGGATGCCCAGAATCAAGCTCTCAAGGATCGATCT
TGAGTGGGTTCATGTATTGAGCGAAGGATGGGCCAGCCCTCTTCGCGGGTTCATGAGAGA
ATCCGAGTTCCTCCAAACTCTTCATTTCAATTCGCTCCGACTCGACGACGGCTCCTTCGT
CAACATGTCGGTGCCGATTGTGTTGGCCATTGATGATGCGGAGAAGCATCAGATTGGTGA
CTCCACCAAGGTCGCTCTCGTCGACTCCAAGGACAATACGATTGCGATTTTAAGCAGTAT
TGAGATCTACAAGCACCACAAAGAAGAAAGGATAGCCAGAACTTGGGGGACTACTGCCCC
TGGTTTGCCGTATGTGGATCAAGCAATAACCAATTCTGGAAACTGGCTGATTGGAGGTGA
CTTGGAGGTTGTTGAGCCAGTCAAGTACAATGATGGTCTTGATCGATTTCGACTATCCCC
TGCCGAACTCCGTGAAGAATTCACCAAGCGCAATGCTGATGCAGTGTTTGCTTTCCAGCT
CAGGAATCCTGTGCACAATGGTCATGCTTTGCTGATGACTGACACACGGCGTCGGCTTCT
TGAGATGGGCTACAAGAACCCTGTCCTCTTACTTCATCCATTAGGAGGCTATACAAAGGC
AGATGATGTTCCGCTTGGTTGGAGAATGAAGCAACATGAGAAGGTGCTTGAAGATGGGGT
TCTTGATCCAGAGACAACTGTAGTTTCTATTTTCCCATCTCCCATGCACTATGCTGGTCC
AACTGAGGTGCAGTGGCATGCAAAGGCTCGCATTAATGCAGGGGCTAACTTTTACATTGT
TGGTCGGGACCCAGCAGGCATGGGCCACCCAGTTGAGAAGAGAGACTTATATGATGCTGA
CCATGGGAAGAAGGTATTGAGCATGGCTCCTGGACTGGAACGGCTAAACATCCTTCCTTT
CAAGGTTGCTGCATATGATAAAACTCAGAATAAAATGGCATTCTTTGATCCCTCAAGGGC
TCAAGACTTCCTCTTCATATCTGGCACAAAGATGAGAACTCTAGCGAAGAACAAAGAGAA
CCCTCCAGACGGATTTATGTGCCCGGGTGGTTGGGAAGTGTTGGTGGAATATTATGACAG
TTTGGTGCCCAGCAACAACGGCAAAGTCCCGGAAACTGTTCCTGCTTAAATGGATTGCTG
CCATCTGATTGGGAGAAACCTTAAATCTATTTATCTCCAGTCTGCATCAAACTATGTTGC
CATCTGATTTGGGAGAAACTTTAAAAACCTATTTGTCTTCTGTGTGTGATTGGTGAAGTT
TGGTAAGAATGGTGTGTGCAGATCCTGTAATAAAACCACGAGAAGCAGTGCCACAGAGG