Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g04100.t01
CDS Infomation

cds chromosome:12X:5:5754625:5770505:1 gene:VIT_05s0020g04100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTACCGTGCCTTCCACTCCTCGCTGGAGCAGTGCGCGGCCAGTCGACACCGCCGAG
TACCTAATTGGCACCTTCGTCGGCGAGAAATCATTCCCTCTCACTTCCGATTTCTGGCAG
AAGCTTCTCGAGCTTCCTCTCAGTCTTCAATGGCCGAGCCACCGTGTTCGTCAAGCTTGC
GAGCTTTTTGCACAGAACAACTATTACACAAGGCATCTTGCAAAGATTTTGATTCACCTG
GGACAATGTTTGCAAGAGTGTATTTCAACTTCTGGTGTGCCATCCACAGTTTATACAAAG
GCTGTTAATGCAGTATACATCTCATCTGTTTTCCTGAAGTACTTAATTGAAAATGCCAAG
AGTGAAAACATTGAGGAATTGCACTTGTCATTAGACGAAAGTGAAGTTATACAAAACAAT
TTTCCTGCTGATCAAAATATTGAAAACTTTGTTATGCACGGTGTGCTTAGTTTTATTGGC
ACCTTGGATGTAAATCCTGAGACACACCTCCTACATCATGAGCTACTTAACTTCATGCTC
ATCGTGATGTCAACTCAGCTTCTTTCTGGGCCATCTCCAGGACCAAAAGATGTGAACCCA
TTCATTGATGCGGCAATGGCTCAGGAAAGTTCTTTGGTTGGTTTGGTTGTTCGCAGACTG
CTAATTAATTATATTAACCGGCCTCGCATTCCCTTAAATGATGTTTCTTATTCCATATTC
TCTGAAGGGAGTCAACCTGGTGTTCTACAGAGAGTTGGTTCAGCAGCTGCAAACTTTGTG
CTATTGCCATTCAATTACCTTGTCAGTTCAGGTGGTGAAGGTCCAAGAAGTCCATTGGCA
GACAGCAGTCTCCAAGTGTTACTTATTCTCATCCATTATCGTAAATGTATTCTGGTAGAT
GAGTCCATAGCAGATAGAAAATCAGGCGGTGCCACTTCAGATTCTCTTTCAAAGGAGAAT
ACATATTTTTCTGAGAACCCTTACTGCAAGGCCTTGGAAAATGCTAGGGATATTGAATTT
GATCGTGTGGATATTGAGGGGAATGCACACAGTGGTCCACTTGTGAGATTACCTTTTGCT
TCGTTGTTTGACACTCTTGGCATGTTCTTGGCTGATGAGACTGCCATCCTACTGCTTTAC
TCACTGGTGCATGGAAACTCTGACTTCCTGGAGTATGTTTTGGTGCGAACTGATTTGGAC
ACATTGTTGATGCCCATTTTGGAGACCTTGTATAATGCGTCAAGGAGGACATCTAATCAA
ATCTACATGTTGTTGATTATCCTTCTTATACTTAGTCAGGATTCCTCTTTCAATGCCAGT
ATTCACAAGCTGATACTTCCTAGTGTTCCATGGTACAAAGAACGCCTCCTTCACCAGACC
TCTCTTGGTTCTCTGATGGTCATAATTCTCATTAGGACTGTGAAATATAACCTATCTAAG
CTGCGGGATGTTTATCTTCATACAAACTGTCTCGCAACTTTGGCGAACATGGCTCCTCAT
GCCCACCGTTTAAGTGCCTATGCATCACAGAGGCTGGTTAGCCTTTTTGATATGCTCTCA
CGCAAGTATAATAAGTTAGCAGAGTTAATGGATGATAAAATGCATATAGACAAAGCCAAC
TCACCAGAAGGGGACAGCATCGCAGAAGATGTGTCAACAGAATTGCATATATACACCGAC
TTCCTGAGAATTGTCCTCGAAATACTGAACGCAATCCTAACTTATGCCCTGCCTCGAAAT
CCTGAGGTTGTATATGCAATAATGCACAGACAGGAGGTCTTTCAGCCTTTCAAGAATCAT
CCACGATTCAATGAGCTGCTTGAAAATATCTACACTGTATTAGATTTTTTCAATAGTCGC
ATGGATGCCCAAGGAATGAATGGTGGATGGTCAGTTGAGAAAGTTCTCCAAGTCATAATC
ATCAACTGCAGATCTTGGCGGGGTGAAGGGATGAAGATGTTTACACAATTACGCTTCACA
TATGAACAAGAGAGCCATCCAGAGGAGTTCTTTATCCCCTATGTGTGGCAGCTAGTTCTA
TCCCGCTGTGGATTCAGCTTTAATGCCAGTACCATAAACTTGTTCCCAGTTGATCAGCCT
ATAGAAAAACAGAATGTTGACTCTGAAGAGGAATTGAATAAGCCTCAAAATGGTGAGTTG
ATTGCTGAGCTGGTTCAATAA

Peptide Sequence

PEP ID

VIT_05s0020g04100.t01
PEP Infomation

pep chromosome:12X:5:5754625:5770505:1 gene:VIT_05s0020g04100 transcript:VIT_05s0020g04100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGTVPSTPRWSSARPVDTAEYLIGTFVGEKSFPLTSDFWQKLLELPLSLQWPSHRVRQAC
ELFAQNNYYTRHLAKILIHLGQCLQECISTSGVPSTVYTKAVNAVYISSVFLKYLIENAK
SENIEELHLSLDESEVIQNNFPADQNIENFVMHGVLSFIGTLDVNPETHLLHHELLNFML
IVMSTQLLSGPSPGPKDVNPFIDAAMAQESSLVGLVVRRLLINYINRPRIPLNDVSYSIF
SEGSQPGVLQRVGSAAANFVLLPFNYLVSSGGEGPRSPLADSSLQVLLILIHYRKCILVD
ESIADRKSGGATSDSLSKENTYFSENPYCKALENARDIEFDRVDIEGNAHSGPLVRLPFA
SLFDTLGMFLADETAILLLYSLVHGNSDFLEYVLVRTDLDTLLMPILETLYNASRRTSNQ
IYMLLIILLILSQDSSFNASIHKLILPSVPWYKERLLHQTSLGSLMVIILIRTVKYNLSK
LRDVYLHTNCLATLANMAPHAHRLSAYASQRLVSLFDMLSRKYNKLAELMDDKMHIDKAN
SPEGDSIAEDVSTELHIYTDFLRIVLEILNAILTYALPRNPEVVYAIMHRQEVFQPFKNH
PRFNELLENIYTVLDFFNSRMDAQGMNGGWSVEKVLQVIIINCRSWRGEGMKMFTQLRFT
YEQESHPEEFFIPYVWQLVLSRCGFSFNASTINLFPVDQPIEKQNVDSEEELNKPQNGEL
IAELVQ

Transcript Sequence

Transcript ID

VIT_05s0020g04100.t01
Transcript Infomation

cdna chromosome:12X:5:5754625:5770505:1 gene:VIT_05s0020g04100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTCAATGGGTACCGTGCCTTCCACTCCTCGCTGGAGCAGTGCGCGGCCAGTCGACACCG
CCGAGTACCTAATTGGCACCTTCGTCGGCGAGAAATCATTCCCTCTCACTTCCGATTTCT
GGCAGAAGCTTCTCGAGCTTCCTCTCAGTCTTCAATGGCCGAGCCACCGTGTTCGTCAAG
CTTGCGAGCTTTTTGCACAGAACAACTATTACACAAGGCATCTTGCAAAGATTTTGATTC
ACCTGGGACAATGTTTGCAAGAGTGTATTTCAACTTCTGGTGTGCCATCCACAGTTTATA
CAAAGGCTGTTAATGCAGTATACATCTCATCTGTTTTCCTGAAGTACTTAATTGAAAATG
CCAAGAGTGAAAACATTGAGGAATTGCACTTGTCATTAGACGAAAGTGAAGTTATACAAA
ACAATTTTCCTGCTGATCAAAATATTGAAAACTTTGTTATGCACGGTGTGCTTAGTTTTA
TTGGCACCTTGGATGTAAATCCTGAGACACACCTCCTACATCATGAGCTACTTAACTTCA
TGCTCATCGTGATGTCAACTCAGCTTCTTTCTGGGCCATCTCCAGGACCAAAAGATGTGA
ACCCATTCATTGATGCGGCAATGGCTCAGGAAAGTTCTTTGGTTGGTTTGGTTGTTCGCA
GACTGCTAATTAATTATATTAACCGGCCTCGCATTCCCTTAAATGATGTTTCTTATTCCA
TATTCTCTGAAGGGAGTCAACCTGGTGTTCTACAGAGAGTTGGTTCAGCAGCTGCAAACT
TTGTGCTATTGCCATTCAATTACCTTGTCAGTTCAGGTGGTGAAGGTCCAAGAAGTCCAT
TGGCAGACAGCAGTCTCCAAGTGTTACTTATTCTCATCCATTATCGTAAATGTATTCTGG
TAGATGAGTCCATAGCAGATAGAAAATCAGGCGGTGCCACTTCAGATTCTCTTTCAAAGG
AGAATACATATTTTTCTGAGAACCCTTACTGCAAGGCCTTGGAAAATGCTAGGGATATTG
AATTTGATCGTGTGGATATTGAGGGGAATGCACACAGTGGTCCACTTGTGAGATTACCTT
TTGCTTCGTTGTTTGACACTCTTGGCATGTTCTTGGCTGATGAGACTGCCATCCTACTGC
TTTACTCACTGGTGCATGGAAACTCTGACTTCCTGGAGTATGTTTTGGTGCGAACTGATT
TGGACACATTGTTGATGCCCATTTTGGAGACCTTGTATAATGCGTCAAGGAGGACATCTA
ATCAAATCTACATGTTGTTGATTATCCTTCTTATACTTAGTCAGGATTCCTCTTTCAATG
CCAGTATTCACAAGCTGATACTTCCTAGTGTTCCATGGTACAAAGAACGCCTCCTTCACC
AGACCTCTCTTGGTTCTCTGATGGTCATAATTCTCATTAGGACTGTGAAATATAACCTAT
CTAAGCTGCGGGATGTTTATCTTCATACAAACTGTCTCGCAACTTTGGCGAACATGGCTC
CTCATGCCCACCGTTTAAGTGCCTATGCATCACAGAGGCTGGTTAGCCTTTTTGATATGC
TCTCACGCAAGTATAATAAGTTAGCAGAGTTAATGGATGATAAAATGCATATAGACAAAG
CCAACTCACCAGAAGGGGACAGCATCGCAGAAGATGTGTCAACAGAATTGCATATATACA
CCGACTTCCTGAGAATTGTCCTCGAAATACTGAACGCAATCCTAACTTATGCCCTGCCTC
GAAATCCTGAGGTTGTATATGCAATAATGCACAGACAGGAGGTCTTTCAGCCTTTCAAGA
ATCATCCACGATTCAATGAGCTGCTTGAAAATATCTACACTGTATTAGATTTTTTCAATA
GTCGCATGGATGCCCAAGGAATGAATGGTGGATGGTCAGTTGAGAAAGTTCTCCAAGTCA
TAATCATCAACTGCAGATCTTGGCGGGGTGAAGGGATGAAGATGTTTACACAATTACGCT
TCACATATGAACAAGAGAGCCATCCAGAGGAGTTCTTTATCCCCTATGTGTGGCAGCTAG
TTCTATCCCGCTGTGGATTCAGCTTTAATGCCAGTACCATAAACTTGTTCCCAGTTGATC
AGCCTATAGAAAAACAGAATGTTGACTCTGAAGAGGAATTGAATAAGCCTCAAAATGGTG
AGTTGATTGCTGAGCTGGTTCAATAATATACTCAACAGAAGAAGTTCCAAGTTTTAGTGA
GATGTAAATACATGAAATAGTAGGAAAATGTATTCTTCTCATTCTTTCTTGTTTATATGC
TTGAGACGTTGTAGAGAGGCCTTTTCATATAAATGAATGTGAGATCCACCTATGTAATGA
ATAAAAGAGGTTGCTCAATTGCGTTAGCAAATAGTAGTTCTTAAAAAAG