Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g04090.t01
CDS Infomation

cds chromosome:12X:5:5751191:5752764:1 gene:VIT_05s0020g04090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATCCCCCGGTTAGAGGAAGCAGTTCATCTTACCCCGATGAGCCTCTCATCGCTGCT
TCTCAACGACCGCAACCAATGGAGGGACTTCATGATATAGGCCCTCCACCTTTTCTCAAC
AAAACCTATGACCTTGTCGACGACCCAAGCACGGATAGTATAGTGTCTTGGAGTATAGGT
AACAACAGCTTTGTTGTATGGGATCCTCAGATCTTTGCCGGGAATCTTCTTCCGAGATAT
TTCAAGCATAACAATTTCTCAAGCTTTGTTAGGCAACTCAACACTTATGGTTTTAGAAAG
GTTGATCCAGACAGATGGGAGTTTGCAAATGAAGAGTTTCTCAGAGGACAAAAGCCTCTG
TTGAAGAAAATCAAGAGGAAGAAGGCACTTCAGCCTTATACCTCACAGCAAGCTGTAGGT
CCGTCAGTTGAAGTTGAGCGATTTGGGTTAGATGGGGAAGTTGATCACAGGAGGCGTGAC
AAGGAGGTTCTGATGATGGAGCTGGTGAAGCTCAGAAGGCAACAACAGGATACAAGAGCT
TACCTCCAAGCAATGGAGCAAAGGATCAAAGGGACAGAGTTGAAACTGAAACAGATGATG
AATTTCTGGGCAAAAGTTATAAAGAATCCCAGTATCATACAGAAATTGGTCCAACAAAGC
AGAACAAAAGAACTTGAATCAGCATTAACTAAAAAGAGGAGACTGATCGATGAAGTGCCT
ACCTATGTGGAAGCCCCGGGGGAAGGAACTTCAGTCAAAATTGAACCCCACGACTATGAT
GACATTTCAGCATTTGAAGTTTCAGAGCTGGATACACTTGCTATGGACATGGAGGGACTA
AGCAAAACTGGGAAGAAGCCAGGGAACGAACAGATAGAGAAAGAAGAGATGAAGCTTGAA
AGTGGAAATAAAGCACTGGATATAGGAATATGGGAAGAGTTTTTGAATGAGGAGCTTGAA
GGAGATATGGGTTTACTGGGTACTGTTGGAGGGGATGATGAGGAAGACGTGAATGTATTG
GTTGACCAGCTGTGTGACTTGGTTTCCAGTCCAGTGTAG

Peptide Sequence

PEP ID

VIT_05s0020g04090.t01
PEP Infomation

pep chromosome:12X:5:5751191:5752764:1 gene:VIT_05s0020g04090 transcript:VIT_05s0020g04090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNPPVRGSSSSYPDEPLIAASQRPQPMEGLHDIGPPPFLNKTYDLVDDPSTDSIVSWSIG
NNSFVVWDPQIFAGNLLPRYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEEFLRGQKPL
LKKIKRKKALQPYTSQQAVGPSVEVERFGLDGEVDHRRRDKEVLMMELVKLRRQQQDTRA
YLQAMEQRIKGTELKLKQMMNFWAKVIKNPSIIQKLVQQSRTKELESALTKKRRLIDEVP
TYVEAPGEGTSVKIEPHDYDDISAFEVSELDTLAMDMEGLSKTGKKPGNEQIEKEEMKLE
SGNKALDIGIWEEFLNEELEGDMGLLGTVGGDDEEDVNVLVDQLCDLVSSPV

Transcript Sequence

Transcript ID

VIT_05s0020g04090.t01
Transcript Infomation

cdna chromosome:12X:5:5751191:5752764:1 gene:VIT_05s0020g04090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATCCCCCGGTTAGAGGAAGCAGTTCATCTTACCCCGATGAGCCTCTCATCGCTGCT
TCTCAACGACCGCAACCAATGGAGGGACTTCATGATATAGGCCCTCCACCTTTTCTCAAC
AAAACCTATGACCTTGTCGACGACCCAAGCACGGATAGTATAGTGTCTTGGAGTATAGGT
AACAACAGCTTTGTTGTATGGGATCCTCAGATCTTTGCCGGGAATCTTCTTCCGAGATAT
TTCAAGCATAACAATTTCTCAAGCTTTGTTAGGCAACTCAACACTTATGGTTTTAGAAAG
GTTGATCCAGACAGATGGGAGTTTGCAAATGAAGAGTTTCTCAGAGGACAAAAGCCTCTG
TTGAAGAAAATCAAGAGGAAGAAGGCACTTCAGCCTTATACCTCACAGCAAGCTGTAGGT
CCGTCAGTTGAAGTTGAGCGATTTGGGTTAGATGGGGAAGTTGATCACAGGAGGCGTGAC
AAGGAGGTTCTGATGATGGAGCTGGTGAAGCTCAGAAGGCAACAACAGGATACAAGAGCT
TACCTCCAAGCAATGGAGCAAAGGATCAAAGGGACAGAGTTGAAACTGAAACAGATGATG
AATTTCTGGGCAAAAGTTATAAAGAATCCCAGTATCATACAGAAATTGGTCCAACAAAGC
AGAACAAAAGAACTTGAATCAGCATTAACTAAAAAGAGGAGACTGATCGATGAAGTGCCT
ACCTATGTGGAAGCCCCGGGGGAAGGAACTTCAGTCAAAATTGAACCCCACGACTATGAT
GACATTTCAGCATTTGAAGTTTCAGAGCTGGATACACTTGCTATGGACATGGAGGGACTA
AGCAAAACTGGGAAGAAGCCAGGGAACGAACAGATAGAGAAAGAAGAGATGAAGCTTGAA
AGTGGAAATAAAGCACTGGATATAGGAATATGGGAAGAGTTTTTGAATGAGGAGCTTGAA
GGAGATATGGGTTTACTGGGTACTGTTGGAGGGGATGATGAGGAAGACGTGAATGTATTG
GTTGACCAGCTGTGTGACTTGGTTTCCAGTCCAGTGTAGGGAGCTGAGCTTTCTCAATGC
TTTCCTACTTGCCTGTGTCTTCAGTAG