Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g03570.t01
CDS Infomation

cds chromosome:12X:5:5303087:5305836:-1 gene:VIT_05s0020g03570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCTTTTCTCAGCCCCAACTCGCTCGCCTCCCTAGTGGAATCGGCCGTGTCAACTCAA
TGCTCCCGCTTAGGCAGAGCTGCCCATGCTCAGATCATCAAGACCCTCGACAACCCCCTC
CCTTCTTTCATTTACAATCACCTTGTCAACATGTATTCCAAACTCGACCGTCCCAACTCA
GCCCAACTCCTCCTCTCACTCACCCCCAACCGCTCCGTTGTCACCTGGACCGCTCTCATC
GCCGGCTCCGTCCAAAACGGTCGTTTCACCTCTGCCCTCTTTCACTTCTCTAACATGCGC
CGTGACTCCATCCAACCCAATGACTTCACCTTCCCCTGTGCCTTCAAGGCTTCCGGCTCG
CTTCGCTCTCCTCTCGTCGGGAAACAGGTCCATGCATTGGCGGTCAAGGCCGGTCAGATT
AGCGATGTTTTTGTTGGATGTAGTGCTTTTGATATGTACTCCAAAGCGGGCCTCACAGAG
GAGGCTAGGAAGATGTTCGATGAAATGCCTGAAAGAAATATTGCGACGTGGAACGCGTAT
TTATCTAATTCAGTGCTCGAGGGCCGGTATGACGATGCGCTTACTGCATTCATTGAGTTT
CGGCACGAGGGTTGGGAACCCAACTTGATAACGTTTTGCGCTTTTCTCAATGCGTGTGCT
GGAGCCTCGTATTTGAGGCTTGGGCGTCAGTTACATGGGTTTGTGCTTCAAAGTGGATTT
GAGGCGGATGTCTCGGTGGCTAATGGACTCATTGATTTTTATGGGAAGTGTCATCAGGTT
GGATGCTCGGAAATTATATTCAGTGGCATTTCTAAGCCAAATGATGTTTCTTGGTGCTCA
ATGATAGTATCATATGTGCAAAATGATGAGGAAGAGAAGGCCTGTTTGGTCTTCTTGAGG
GCTAGGAAAGAAGGCATTGAGCCAACAGATTTCATGGTTTCAAGTGTTCTTAGTGCTTGT
GCTGGCCTTTCAGTGCTTGAAGTGGGAAAGTCAGTTCATACGCTTGCTGTGAAGGCTTGT
GTTGTGGGCAATATTTTTGTGGGCAGCGCACTTGTTGATATGTATGGAAAATGTGGAAGC
ATTGAGGATGCTGAGAGGGCATTTGATGAGATGCCTGAGAGGAATTTAGTTACTTGGAAT
GCAATGATAGGTGGGTACGCACACCAAGGGCAAGCTGACATGGCTGTCACATTGTTCGAC
GAAATGACATGTGGCAGTCACAGGGTTGCACCTAATTATGTTACATTTGTGTGTGTTTTA
TCAGCATGCAGCAGGGCTGGGTCAGTGAATGTGGGCATGGAAATTTTTGAGTCAATGAGA
GGAAGATACGGAATTGAACCAGGAGCAGAGCATTATGCATGTGTTGTGGACCTGCTTGGG
AGAGCAGGAATGGTAGAGCAAGCCTATCAGTTTATAAAGAAAATGCCAATTCGACCAACA
GTTTCAGTTTGGGGGGCTCTTTTAGGAGCTTCTAAAATGTTTGGGAAGTCAGAATTGGGA
AAGGTTGCCGCTGATAACTTATTTGAACTAGACCCACTAGACTCTGGCAACCATGTTCTG
CTTTCAAATATGTTTGCAGCTGCTGGCAGGTGGGAAGAAGCCACACTTGTGAGAAAGGAG
ATGAAGGATGTCGGGATCAAAAAGGGTGCAGGATGCAGTTGGATCACTGCAGGGAATGCA
GTCCATGTCTTCCAAGCAAAGGATACTTCCCATGAGAGAAACTCAGAGATTCAGGCAATG
CTGGCAAAGCTGAGGGGGGAAATGGAGGCAGCTGGCTATATACCCGATACCAGTTTTGCT
CTGTTTGATCTAGAAGAAGAAGAGAAAGCGATGGAAGTTTGGTACCACAGTGAAAAGATT
GCCCTTGCTTTTGGCCTCATCTCTATTCCTGCTGGAGTACCCATAAGGATCACCAAAAAT
CTTAGAATTTGTGGAGATTGTCATAGTGCCATTAAGTTCATTTCCGGCATTGTTGGTAGA
GAAATTATTGTGAGAGATAATAATCTATTCCATCGCTTCAGGGATAATCAGTGCTCTTGT
AGGGATTATTGGTGA

Peptide Sequence

PEP ID

VIT_05s0020g03570.t01
PEP Infomation

pep chromosome:12X:5:5303087:5305836:-1 gene:VIT_05s0020g03570 transcript:VIT_05s0020g03570.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPFLSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNS
AQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGS
LRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAY
LSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGF
EADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLR
ARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGS
IEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVL
SACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPT
VSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKE
MKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFA
LFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGR
EIIVRDNNLFHRFRDNQCSCRDYW

Transcript Sequence

Transcript ID

VIT_05s0020g03570.t01
Transcript Infomation

cdna chromosome:12X:5:5303087:5305836:-1 gene:VIT_05s0020g03570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CATATGTCAATGTTCCTCTTCTTCATGCTGCAACCCCCTCGCCAAGATCAATGAAGACTT
TGATCACCGTCAATGCCTTTTCTCAGCCCCAACTCGCTCGCCTCCCTAGTGGAATCGGCC
GTGTCAACTCAATGCTCCCGCTTAGGCAGAGCTGCCCATGCTCAGATCATCAAGACCCTC
GACAACCCCCTCCCTTCTTTCATTTACAATCACCTTGTCAACATGTATTCCAAACTCGAC
CGTCCCAACTCAGCCCAACTCCTCCTCTCACTCACCCCCAACCGCTCCGTTGTCACCTGG
ACCGCTCTCATCGCCGGCTCCGTCCAAAACGGTCGTTTCACCTCTGCCCTCTTTCACTTC
TCTAACATGCGCCGTGACTCCATCCAACCCAATGACTTCACCTTCCCCTGTGCCTTCAAG
GCTTCCGGCTCGCTTCGCTCTCCTCTCGTCGGGAAACAGGTCCATGCATTGGCGGTCAAG
GCCGGTCAGATTAGCGATGTTTTTGTTGGATGTAGTGCTTTTGATATGTACTCCAAAGCG
GGCCTCACAGAGGAGGCTAGGAAGATGTTCGATGAAATGCCTGAAAGAAATATTGCGACG
TGGAACGCGTATTTATCTAATTCAGTGCTCGAGGGCCGGTATGACGATGCGCTTACTGCA
TTCATTGAGTTTCGGCACGAGGGTTGGGAACCCAACTTGATAACGTTTTGCGCTTTTCTC
AATGCGTGTGCTGGAGCCTCGTATTTGAGGCTTGGGCGTCAGTTACATGGGTTTGTGCTT
CAAAGTGGATTTGAGGCGGATGTCTCGGTGGCTAATGGACTCATTGATTTTTATGGGAAG
TGTCATCAGGTTGGATGCTCGGAAATTATATTCAGTGGCATTTCTAAGCCAAATGATGTT
TCTTGGTGCTCAATGATAGTATCATATGTGCAAAATGATGAGGAAGAGAAGGCCTGTTTG
GTCTTCTTGAGGGCTAGGAAAGAAGGCATTGAGCCAACAGATTTCATGGTTTCAAGTGTT
CTTAGTGCTTGTGCTGGCCTTTCAGTGCTTGAAGTGGGAAAGTCAGTTCATACGCTTGCT
GTGAAGGCTTGTGTTGTGGGCAATATTTTTGTGGGCAGCGCACTTGTTGATATGTATGGA
AAATGTGGAAGCATTGAGGATGCTGAGAGGGCATTTGATGAGATGCCTGAGAGGAATTTA
GTTACTTGGAATGCAATGATAGGTGGGTACGCACACCAAGGGCAAGCTGACATGGCTGTC
ACATTGTTCGACGAAATGACATGTGGCAGTCACAGGGTTGCACCTAATTATGTTACATTT
GTGTGTGTTTTATCAGCATGCAGCAGGGCTGGGTCAGTGAATGTGGGCATGGAAATTTTT
GAGTCAATGAGAGGAAGATACGGAATTGAACCAGGAGCAGAGCATTATGCATGTGTTGTG
GACCTGCTTGGGAGAGCAGGAATGGTAGAGCAAGCCTATCAGTTTATAAAGAAAATGCCA
ATTCGACCAACAGTTTCAGTTTGGGGGGCTCTTTTAGGAGCTTCTAAAATGTTTGGGAAG
TCAGAATTGGGAAAGGTTGCCGCTGATAACTTATTTGAACTAGACCCACTAGACTCTGGC
AACCATGTTCTGCTTTCAAATATGTTTGCAGCTGCTGGCAGGTGGGAAGAAGCCACACTT
GTGAGAAAGGAGATGAAGGATGTCGGGATCAAAAAGGGTGCAGGATGCAGTTGGATCACT
GCAGGGAATGCAGTCCATGTCTTCCAAGCAAAGGATACTTCCCATGAGAGAAACTCAGAG
ATTCAGGCAATGCTGGCAAAGCTGAGGGGGGAAATGGAGGCAGCTGGCTATATACCCGAT
ACCAGTTTTGCTCTGTTTGATCTAGAAGAAGAAGAGAAAGCGATGGAAGTTTGGTACCAC
AGTGAAAAGATTGCCCTTGCTTTTGGCCTCATCTCTATTCCTGCTGGAGTACCCATAAGG
ATCACCAAAAATCTTAGAATTTGTGGAGATTGTCATAGTGCCATTAAGTTCATTTCCGGC
ATTGTTGGTAGAGAAATTATTGTGAGAGATAATAATCTATTCCATCGCTTCAGGGATAAT
CAGTGCTCTTGTAGGGATTATTGGTGA