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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g03430.t01
CDS Infomation

cds chromosome:12X:5:5203562:5209650:1 gene:VIT_05s0020g03430 gene_biotype:protein_coding transcript_biotype:protein_coding description:Imidazoleglycerol-phosphate dehydratase [Source:UniProtKB/TrEMBL;Acc:F6HDQ1]
Sequence

ATGGAGCTTTCTGCGCCCTCAGCCCTTCTGAGCTACTGTTCTTCGTCACAGGGCCTACAA
CCACTGAAAGTTAGGGACAGGGTTTCATACCGAACTCTCGCTGCCACACGCTTGAAAGAG
ACCAGTCTTCTCTCACGCTTGAAAGAGACCAATTTTCTCTCTACACCTCCTCTAATGGAT
CCCCTGAGGGTAGTCTCTTGCGCGTCATCGGTCGATGAGAATGGCTCTCCGATAATGTCT
TCCTCCATCCGCACAGGTCGAATTGGAGAGGTGAAAAGGGTTACTAAAGAAACCAATGTA
ATGGTCTCAATGAACTTGGATGGTTCAGGCGTTGCTCAAAATGATACTGGAATCCCCTTT
CTCGATCATATGTTAGATCAACTTGCCACGCATGGGCTGTTTGACGTTTGTGTGAAAGCG
ACCGGTGACACACACATTGATGATCATCATACAAATGAAGATGTTGCACTTGCGCTCGGA
ACGAGTTTGCTGCGTGCAATTGGTTCAAAGGAAGGCATTTATCGGTTTGGTGACTTTTCA
GCTCCTTTAGATGAAGCACTAATTCACGTTTCGCTGGATTTATCTGGACGTCCACATTTA
AGCTATGATTTACATATCCCCACTGAGAGAGTTGGAACATATGACACTCAGTTGGTGGAG
CACTTTTTCCAGTCTTTGGTGAATACTTCAGGCATGACACTTCACATTCGACAGCTTGCT
GGAAAAAATTCTCATCATATTATTGAGGCAACTTTCAAGGCTTTCGCTAAAGCTCTTCGA
CAAGCTGTGGAATATGACCCACGCCGTCATGGCACTGTGCCAAGCTCAAAAGGGGTTCTT
ACGCGTTCTTGA

Peptide Sequence

PEP ID

VIT_05s0020g03430.t01
PEP Infomation

pep chromosome:12X:5:5203562:5209650:1 gene:VIT_05s0020g03430 transcript:VIT_05s0020g03430.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Imidazoleglycerol-phosphate dehydratase [Source:UniProtKB/TrEMBL;Acc:F6HDQ1]
Sequence

MELSAPSALLSYCSSSQGLQPLKVRDRVSYRTLAATRLKETSLLSRLKETNFLSTPPLMD
PLRVVSCASSVDENGSPIMSSSIRTGRIGEVKRVTKETNVMVSMNLDGSGVAQNDTGIPF
LDHMLDQLATHGLFDVCVKATGDTHIDDHHTNEDVALALGTSLLRAIGSKEGIYRFGDFS
APLDEALIHVSLDLSGRPHLSYDLHIPTERVGTYDTQLVEHFFQSLVNTSGMTLHIRQLA
GKNSHHIIEATFKAFAKALRQAVEYDPRRHGTVPSSKGVLTRS

Transcript Sequence

Transcript ID

VIT_05s0020g03430.t01
Transcript Infomation

cdna chromosome:12X:5:5203562:5209650:1 gene:VIT_05s0020g03430 gene_biotype:protein_coding transcript_biotype:protein_coding description:Imidazoleglycerol-phosphate dehydratase [Source:UniProtKB/TrEMBL;Acc:F6HDQ1]
Sequence

GCTGTAGCCTCGCTGGGTAAGCTTGGATGGAGCTTTCTGCGCCCTCAGCCCTTCTGAGCT
ACTGTTCTTCGTCACAGGGCCTACAACCACTGAAAGTTAGGGACAGGGTTTCATACCGAA
CTCTCGCTGCCACACGCTTGAAAGAGACCAGTCTTCTCTCACGCTTGAAAGAGACCAATT
TTCTCTCTACACCTCCTCTAATGGATCCCCTGAGGGTAGTCTCTTGCGCGTCATCGGTCG
ATGAGAATGGCTCTCCGATAATGTCTTCCTCCATCCGCACAGGTCGAATTGGAGAGGTGA
AAAGGGTTACTAAAGAAACCAATGTAATGGTCTCAATGAACTTGGATGGTTCAGGCGTTG
CTCAAAATGATACTGGAATCCCCTTTCTCGATCATATGTTAGATCAACTTGCCACGCATG
GGCTGTTTGACGTTTGTGTGAAAGCGACCGGTGACACACACATTGATGATCATCATACAA
ATGAAGATGTTGCACTTGCGCTCGGAACGAGTTTGCTGCGTGCAATTGGTTCAAAGGAAG
GCATTTATCGGTTTGGTGACTTTTCAGCTCCTTTAGATGAAGCACTAATTCACGTTTCGC
TGGATTTATCTGGACGTCCACATTTAAGCTATGATTTACATATCCCCACTGAGAGAGTTG
GAACATATGACACTCAGTTGGTGGAGCACTTTTTCCAGTCTTTGGTGAATACTTCAGGCA
TGACACTTCACATTCGACAGCTTGCTGGAAAAAATTCTCATCATATTATTGAGGCAACTT
TCAAGGCTTTCGCTAAAGCTCTTCGACAAGCTGTGGAATATGACCCACGCCGTCATGGCA
CTGTGCCAAGCTCAAAAGGGGTTCTTACGCGTTCTTGATTTGTGGAGATCATGCTCATGG
AGGATCATGCTACAAGCATCCAGATTCGTCTTGATGTTTTCTCATAGTTTTGGACCCATA
AAGAAATTTATCAGATTCGGTGCAAACTTCAAGAGGCAGACAGTTGCTTAACATTTTAGT
AATTGAAGTAGTGATAGTGCAATATTAAACAATAAATTCCTCTTAAATGTATTTAGATTT
TTTGGTGTTCCTGTAGGAGAAACTTGTCGGTGTGAATGTATAAAACCTAGGTTGCTTGTA
AAATGGCTTTACTCTTTTGTATCAGCAGTTAATTTTATGGTTTTTGATTAACTATTGCTG
ATCATTGGGTGCAGTAATTTGGATTTGCCTGAGTTGACAGGCTGTGGGTGAAATTGAGTT
GAGTGGAATTTGAGCTCATGAACTAAAACTTTGTGTTT