Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g03340.t01
CDS Infomation

cds chromosome:12X:5:5098458:5099384:-1 gene:VIT_05s0020g03340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAGACTTCCCATCTTGTTTTGGTGAAAATGGGGTTCAAGTAGCTGATTCTACTTCT
TCAGGTGTCTCTAGGAGTACTGCTCAAAATTTGGTTACATGCGTCTATTCATGTAAATTA
GGAGGCAAATCTTGCTTGATCATAATTACATGGAGCAAAAATCTGGTGGGTCAGTGCCTT
AGTGTTGAAATCGATGATTGGATGAATCAGTGTCTCTGTAAATTTGACATAAAGCCATGG
TTGTTCGCCAAAAGAAAAGGGTCTAAGAGTTTTGAGATTAATTCTATTCAAGTCGACACA
TATTGGGATCTCTCTTTGGCAAAATTCGGATCTGGGCCTGAGCCATTGGAGGGCTTCTAT
TTGGCAGTGGTGTTTAATGGAGAGATGGTTCTACTTCTCGGGGATATGAGGAAAGAAGCA
TTCAAAAAGACTAATGCCACACCTGGTTTTTACAATGCCATCTTCGTTAGCAAGAAGGAA
CACATTTTTGGAAAGAAGTTGTATGGCACTAAGGCTCAATTTTGGGACAATGGCCAGAAT
CATAATCTATCAATTGAGTGTGACACAGTTGGTACAGACGACCCCTTCCTCGCCATCCGC
ATAGATAGTAAGATGGTTATGCAGGTGAAGCACCTCCGATGGAAGTTTCGGGGAAATCAG
ACCATCTTAATCGATGGGCTCCCGGTAGAAGTTTTCTGGGATGTCCATAATTGGCTGTTT
GGTCCAAGTGTCGGAAATGCAGTTTTCATGTTCCAAACTTGCTCCTCAGCTGAGAAGTTG
TGGTCAAGCCAACCATTCTTTGATTCCTCTGCCTTGCTTTCGCCTTGCTCACAGAATTTC
AGGGAGTTTAAATTACAAGGTCTTGGTTTTTCACTGATTTTGTATGCTTGGAAGAATGAG
TAG

Peptide Sequence

PEP ID

VIT_05s0020g03340.t01
PEP Infomation

pep chromosome:12X:5:5098458:5099384:-1 gene:VIT_05s0020g03340 transcript:VIT_05s0020g03340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRDFPSCFGENGVQVADSTSSGVSRSTAQNLVTCVYSCKLGGKSCLIIITWSKNLVGQCL
SVEIDDWMNQCLCKFDIKPWLFAKRKGSKSFEINSIQVDTYWDLSLAKFGSGPEPLEGFY
LAVVFNGEMVLLLGDMRKEAFKKTNATPGFYNAIFVSKKEHIFGKKLYGTKAQFWDNGQN
HNLSIECDTVGTDDPFLAIRIDSKMVMQVKHLRWKFRGNQTILIDGLPVEVFWDVHNWLF
GPSVGNAVFMFQTCSSAEKLWSSQPFFDSSALLSPCSQNFREFKLQGLGFSLILYAWKNE

Transcript Sequence

Transcript ID

VIT_05s0020g03340.t01
Transcript Infomation

cdna chromosome:12X:5:5098458:5099384:-1 gene:VIT_05s0020g03340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTTTCCTCGTGTCAGTATGAGAGACTTCCCATCTTGTTTTGGTGAAAATGGGGTTCAAG
TAGCTGATTCTACTTCTTCAGGTGTCTCTAGGAGTACTGCTCAAAATTTGGTTACATGCG
TCTATTCATGTAAATTAGGAGGCAAATCTTGCTTGATCATAATTACATGGAGCAAAAATC
TGGTGGGTCAGTGCCTTAGTGTTGAAATCGATGATTGGATGAATCAGTGTCTCTGTAAAT
TTGACATAAAGCCATGGTTGTTCGCCAAAAGAAAAGGGTCTAAGAGTTTTGAGATTAATT
CTATTCAAGTCGACACATATTGGGATCTCTCTTTGGCAAAATTCGGATCTGGGCCTGAGC
CATTGGAGGGCTTCTATTTGGCAGTGGTGTTTAATGGAGAGATGGTTCTACTTCTCGGGG
ATATGAGGAAAGAAGCATTCAAAAAGACTAATGCCACACCTGGTTTTTACAATGCCATCT
TCGTTAGCAAGAAGGAACACATTTTTGGAAAGAAGTTGTATGGCACTAAGGCTCAATTTT
GGGACAATGGCCAGAATCATAATCTATCAATTGAGTGTGACACAGTTGGTACAGACGACC
CCTTCCTCGCCATCCGCATAGATAGTAAGATGGTTATGCAGGTGAAGCACCTCCGATGGA
AGTTTCGGGGAAATCAGACCATCTTAATCGATGGGCTCCCGGTAGAAGTTTTCTGGGATG
TCCATAATTGGCTGTTTGGTCCAAGTGTCGGAAATGCAGTTTTCATGTTCCAAACTTGCT
CCTCAGCTGAGAAGTTGTGGTCAAGCCAACCATTCTTTGATTCCTCTGCCTTGCTTTCGC
CTTGCTCACAGAATTTCAGGGAGTTTAAATTACAAGGTCTTGGTTTTTCACTGATTTTGT
ATGCTTGGAAGAATGAGTAGATGTATG