Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g03020.t01
CDS Infomation

cds chromosome:12X:5:4747935:4764285:-1 gene:VIT_05s0020g03020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGCTTCAGAAGCGCCAAGATCAGGGCCAGCCCGAGAGGAAGGGGCAAAAACGGAAA
CTGGAGGAAGAATTCGAAGAGGAGCGGGAGATCTCCGTGGCGCCGTCCGGCGAGGCGCAC
CAGGCGTTATCCTGCGAGGTCAGTGCGCAGGTTAATATCCTCAACACAACCTTTTCGTGG
AAAGAAGCCGATCGAGCCGCCGCTAAGAGAGCCACTCACGTACTCGCCGAGCTTGCTAAG
AACGAGGAAGTTGTGAATGTAATCGTCGACGGTGGGGCTGTTCCGGCACTGGTGAAGCAT
CTGCAGGCACCGCCTTCCAGCGATGGCGACCATGACCAGAGGCCCTTCGAGCACGAGGTT
GAGAAAGGGAGTGCTTTTGCTCTGGGTCTCCTTGCTGTAAAGCCAGAGCATCAGCAACTC
ATAGTTGATAATGGTGCTTTGTCTCATCTAGTGGATCTTTTAAAGAGGCACAGAGATGGT
TCTAACTCTCGAGCTGTCAATAGTGTCATTCGAAGAGCAGCCGATGCTGTCACTAACCTT
GCTCATGAGAATAGCAGTATTAAAACCAGAGTCAGGATGGAAGGCGGGATACCACCCCTT
GTTCAGTTACTTGAATTTGCTGATACAAAGGTGCAACGGGCAGCTGCTGGGGCACTGAGA
ACCCTGGCATTTAAAAATGATGAAAATAAAAATCAGATTGTAGAATGTAATGCTCTCCCT
ACCCTGATTCTAATGCTTCGATCTGAGGATGCTGCTATACATTATGAAGCAGTTGGTGTA
ATTGGAAATTTGGTACACTCTTCGCCAAACATAAAGAAAGAAGTGCTTTTGGCTGGAGCT
TTACAGCCTGTTATAGGATTACTTAGTTCGTGCTGCTCTGAGAGCCAAAGGGAGGCAGCT
TTGTTACTTGGACAATTTGCTGCAACTGATTCAGATTGCAAGGTGCATATTGCACAGAGA
GGTGCTGTGCGACCTTTGATTGAGATGCTTCAATCTGCAGATGTACAGCTGAGGGAAATG
TCAGCCTTTGCATTGGGGAGATTGGCACAGGACACACACAATCAAGCCGGTATTGCTCAT
AATGGCGGTCTAGTCCCATTATTGAAGCTTCTTGATTCAAAAAATGGATCACTGCAACAT
AATGCTGCATTTGCACTTTATGGCCTTGCAGATAATGAGGACAATGTATCTGATTTTATC
AAGGTGGGAGGGGTTCAGAAGCTGCAGGATGGAGAATTTATTGTTCAAGCAACAAAAGAT
TGTGTAGCCAAGACATTGAAAAGATTAGAGGAAAAGATTCATGGAAGAGTTTTGAACCAT
TTGTTATATCTGATGCGTGTATCTGAGAAGGCTGTTCAAAGACGAGTTGCTTTAGCTCTT
GCTCATCTTTGTTCTGCAGATGATCAGAGGACAATCTTCATTGATAACAATGGATTGGAG
TTGCTTCTTGGGCTTCTTGGTTCTTCAAGCCCAAAGCAGCAACTTGATGGTTCTGTGGCT
CTCTACAAATTGGCCAACAAAGCCATGACTCTCTCTCCTGTGGATGCAGCTCCTCCTTCT
CCCACACCCCAGGTCTATTTGGGAGAGCAATATGTAAACAGTGCTACATTGTCCGATGTT
ACCTTTCTAGTTGGAGGTAAAAGGTTCTATGCTCACCGAATTTGCCTTTTGGCATCTTCA
GATGCATTCCGTGCAATGTTTGATGGTGGTTATCGGGAGAAGGATGCAAGAGATATAGAG
ATCCCGAATATCAGATGGGAGGTTTTTGAGTTGATGATGAGATTTATATACACTGGATCT
GTAGAAATTACATTGGATATTGCACAAGATCTCCTCAGAGCTGCTGATCAGTATCTCTTG
GAGGGACTAAAGCGTCTCTGTGAGTATACCATTGCCCAGGATATATCACTGGAAAATGTT
TCAAGTATGTATGAACTTTCAGAAGCCTTCCATGCTATTTCATTAAGACACACATGCATC
CTGTTTATCTTGGAGCAGTTCAGTAAACTGAGTTCTAGGCCCGGCACTTACCAAAAAGTG
GTAGATCTTCGTGGCGGTGGTGAGCAGGTGGAAGGATCTAACTGGTTGATTGTAGTGTGG
CCCAAATGTTTTGCTGATTCAAGAGTTCTGTTGCTTGCCTGA

Peptide Sequence

PEP ID

VIT_05s0020g03020.t01
PEP Infomation

pep chromosome:12X:5:4747935:4764285:-1 gene:VIT_05s0020g03020 transcript:VIT_05s0020g03020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MELQKRQDQGQPERKGQKRKLEEEFEEEREISVAPSGEAHQALSCEVSAQVNILNTTFSW
KEADRAAAKRATHVLAELAKNEEVVNVIVDGGAVPALVKHLQAPPSSDGDHDQRPFEHEV
EKGSAFALGLLAVKPEHQQLIVDNGALSHLVDLLKRHRDGSNSRAVNSVIRRAADAVTNL
AHENSSIKTRVRMEGGIPPLVQLLEFADTKVQRAAAGALRTLAFKNDENKNQIVECNALP
TLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSCCSESQREAA
LLLGQFAATDSDCKVHIAQRGAVRPLIEMLQSADVQLREMSAFALGRLAQDTHNQAGIAH
NGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIKVGGVQKLQDGEFIVQATKD
CVAKTLKRLEEKIHGRVLNHLLYLMRVSEKAVQRRVALALAHLCSADDQRTIFIDNNGLE
LLLGLLGSSSPKQQLDGSVALYKLANKAMTLSPVDAAPPSPTPQVYLGEQYVNSATLSDV
TFLVGGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGS
VEITLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCI
LFILEQFSKLSSRPGTYQKVVDLRGGGEQVEGSNWLIVVWPKCFADSRVLLLA

Transcript Sequence

Transcript ID

VIT_05s0020g03020.t01
Transcript Infomation

cdna chromosome:12X:5:4747935:4764285:-1 gene:VIT_05s0020g03020 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGCCTTGATGGAGCTTCAGAAGCGCCAAGATCAGGGCCAGCCCGAGAGGAAGGGGCAAA
AACGGAAACTGGAGGAAGAATTCGAAGAGGAGCGGGAGATCTCCGTGGCGCCGTCCGGCG
AGGCGCACCAGGCGTTATCCTGCGAGGTCAGTGCGCAGGTTAATATCCTCAACACAACCT
TTTCGTGGAAAGAAGCCGATCGAGCCGCCGCTAAGAGAGCCACTCACGTACTCGCCGAGC
TTGCTAAGAACGAGGAAGTTGTGAATGTAATCGTCGACGGTGGGGCTGTTCCGGCACTGG
TGAAGCATCTGCAGGCACCGCCTTCCAGCGATGGCGACCATGACCAGAGGCCCTTCGAGC
ACGAGGTTGAGAAAGGGAGTGCTTTTGCTCTGGGTCTCCTTGCTGTAAAGCCAGAGCATC
AGCAACTCATAGTTGATAATGGTGCTTTGTCTCATCTAGTGGATCTTTTAAAGAGGCACA
GAGATGGTTCTAACTCTCGAGCTGTCAATAGTGTCATTCGAAGAGCAGCCGATGCTGTCA
CTAACCTTGCTCATGAGAATAGCAGTATTAAAACCAGAGTCAGGATGGAAGGCGGGATAC
CACCCCTTGTTCAGTTACTTGAATTTGCTGATACAAAGGTGCAACGGGCAGCTGCTGGGG
CACTGAGAACCCTGGCATTTAAAAATGATGAAAATAAAAATCAGATTGTAGAATGTAATG
CTCTCCCTACCCTGATTCTAATGCTTCGATCTGAGGATGCTGCTATACATTATGAAGCAG
TTGGTGTAATTGGAAATTTGGTACACTCTTCGCCAAACATAAAGAAAGAAGTGCTTTTGG
CTGGAGCTTTACAGCCTGTTATAGGATTACTTAGTTCGTGCTGCTCTGAGAGCCAAAGGG
AGGCAGCTTTGTTACTTGGACAATTTGCTGCAACTGATTCAGATTGCAAGGTGCATATTG
CACAGAGAGGTGCTGTGCGACCTTTGATTGAGATGCTTCAATCTGCAGATGTACAGCTGA
GGGAAATGTCAGCCTTTGCATTGGGGAGATTGGCACAGGACACACACAATCAAGCCGGTA
TTGCTCATAATGGCGGTCTAGTCCCATTATTGAAGCTTCTTGATTCAAAAAATGGATCAC
TGCAACATAATGCTGCATTTGCACTTTATGGCCTTGCAGATAATGAGGACAATGTATCTG
ATTTTATCAAGGTGGGAGGGGTTCAGAAGCTGCAGGATGGAGAATTTATTGTTCAAGCAA
CAAAAGATTGTGTAGCCAAGACATTGAAAAGATTAGAGGAAAAGATTCATGGAAGAGTTT
TGAACCATTTGTTATATCTGATGCGTGTATCTGAGAAGGCTGTTCAAAGACGAGTTGCTT
TAGCTCTTGCTCATCTTTGTTCTGCAGATGATCAGAGGACAATCTTCATTGATAACAATG
GATTGGAGTTGCTTCTTGGGCTTCTTGGTTCTTCAAGCCCAAAGCAGCAACTTGATGGTT
CTGTGGCTCTCTACAAATTGGCCAACAAAGCCATGACTCTCTCTCCTGTGGATGCAGCTC
CTCCTTCTCCCACACCCCAGGTCTATTTGGGAGAGCAATATGTAAACAGTGCTACATTGT
CCGATGTTACCTTTCTAGTTGGAGGTAAAAGGTTCTATGCTCACCGAATTTGCCTTTTGG
CATCTTCAGATGCATTCCGTGCAATGTTTGATGGTGGTTATCGGGAGAAGGATGCAAGAG
ATATAGAGATCCCGAATATCAGATGGGAGGTTTTTGAGTTGATGATGAGATTTATATACA
CTGGATCTGTAGAAATTACATTGGATATTGCACAAGATCTCCTCAGAGCTGCTGATCAGT
ATCTCTTGGAGGGACTAAAGCGTCTCTGTGAGTATACCATTGCCCAGGATATATCACTGG
AAAATGTTTCAAGTATGTATGAACTTTCAGAAGCCTTCCATGCTATTTCATTAAGACACA
CATGCATCCTGTTTATCTTGGAGCAGTTCAGTAAACTGAGTTCTAGGCCCGGCACTTACC
AAAAAGTGGTAGATCTTCGTGGCGGTGGTGAGCAGGTGGAAGGATCTAACTGGTTGATTG
TAGTGTGGCCCAAATGTTTTGCTGATTCAAGAGTTCTGTTGCTTGCCTGACTCACAAGTG
TATTATCACTCAGTGGGAGGTGGCATCTTTCACCGAGCATTAGGTATTTTGATTTTGGTT
CTTTGTTAGGTTCTCTCTCTATGGTGATGAACCAAATGTAATAGACTTT