Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g02850.t01
CDS Infomation

cds chromosome:12X:5:4540106:4546285:1 gene:VIT_05s0020g02850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Type II peroxiredoxin F [Source:UniProtKB/TrEMBL;Acc:D7T6T0]
Sequence

ATGGCGTCCAGAATTCTGAAGCGAAGCATGATGATGAAATCAACGGTGGAGAGTCTCCGA
ATCGCAGCTGCAGCAGCATCAAGGCATTACGCCTCTGTTGCAGTGGGGACAGATTTAGTG
TCAGCTGCACCAGATGTTCGTCTCCAGAAGGCTCGGACCTGGGACGAAGGCGTCTCCTCT
AAGTTTTCCACAACACCTCTCAAAGAACTTTTCAAGGACAAGAAAGTGGTCATCTTTGGT
CTCCCTGGTGCTTATACAGGTGTTTGTTCAGCCCAGCATGTGCCTAGCTACAAAAAAAAT
GTTGATAAGTTCAAGGCTAAAGGGATTGATTCTGTTATTTGTGTGGCTGTCAATGATCCA
TACACTTTAAATGCCTGGGCAGAAAAACTTGAAGCCAAAGATGCAATTGAGTTTTATGGG
GACTTTGATGGAAGCTTCCACAAGAGCTTGGATTTAGAAGTGGATCTTTCCGCTGCTTTG
CTTGGACCTCGTTCTCATAGATGGTCAGCATATGTGGTTGATGGGAAGGTCAAGGCTCTT
AATATAGAGAGTGCTCCATCCGAGGTTAAGGTTTCTGGTGCAGATGTAATTTTGGAACAG
ATTTAA

Peptide Sequence

PEP ID

VIT_05s0020g02850.t01
PEP Infomation

pep chromosome:12X:5:4540106:4546285:1 gene:VIT_05s0020g02850 transcript:VIT_05s0020g02850.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Type II peroxiredoxin F [Source:UniProtKB/TrEMBL;Acc:D7T6T0]
Sequence

MASRILKRSMMMKSTVESLRIAAAAASRHYASVAVGTDLVSAAPDVRLQKARTWDEGVSS
KFSTTPLKELFKDKKVVIFGLPGAYTGVCSAQHVPSYKKNVDKFKAKGIDSVICVAVNDP
YTLNAWAEKLEAKDAIEFYGDFDGSFHKSLDLEVDLSAALLGPRSHRWSAYVVDGKVKAL
NIESAPSEVKVSGADVILEQI

Transcript Sequence

Transcript ID

VIT_05s0020g02850.t01
Transcript Infomation

cdna chromosome:12X:5:4540106:4546285:1 gene:VIT_05s0020g02850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Type II peroxiredoxin F [Source:UniProtKB/TrEMBL;Acc:D7T6T0]
Sequence

GTCACGGTTGGAATCCATGGCGTCCAGAATTCTGAAGCGAAGCATGATGATGAAATCAAC
GGTGGAGAGTCTCCGAATCGCAGCTGCAGCAGCATCAAGGCATTACGCCTCTGTTGCAGT
GGGGACAGATTTAGTGTCAGCTGCACCAGATGTTCGTCTCCAGAAGGCTCGGACCTGGGA
CGAAGGCGTCTCCTCTAAGTTTTCCACAACACCTCTCAAAGAACTTTTCAAGGACAAGAA
AGTGGTCATCTTTGGTCTCCCTGGTGCTTATACAGGTGTTTGTTCAGCCCAGCATGTGCC
TAGCTACAAAAAAAATGTTGATAAGTTCAAGGCTAAAGGGATTGATTCTGTTATTTGTGT
GGCTGTCAATGATCCATACACTTTAAATGCCTGGGCAGAAAAACTTGAAGCCAAAGATGC
AATTGAGTTTTATGGGGACTTTGATGGAAGCTTCCACAAGAGCTTGGATTTAGAAGTGGA
TCTTTCCGCTGCTTTGCTTGGACCTCGTTCTCATAGATGGTCAGCATATGTGGTTGATGG
GAAGGTCAAGGCTCTTAATATAGAGAGTGCTCCATCCGAGGTTAAGGTTTCTGGTGCAGA
TGTAATTTTGGAACAGATTTAAAGTTGTCCTGTTCCACTTTGTCGTTCAATCCACAATAC
TGCTGGTATGTTGTGGGGCAACTCTGAGTTTTCCAGTAGAAAGGGTGACTACATGGCTAA
TAATTTGAAGTGTTCCAGAAGTTTCTACAGGGCTTCTTTGCATCTTTCTTTGACCCTGTT
CTTTGGAATAAGGTGGGTCGATAATTGACTTAGTCTGAAAATCAAAGAGTTGAATATAAA
GTTTATGTGGCTGAT