Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g02720.t01
CDS Infomation

cds chromosome:12X:5:4453502:4455917:1 gene:VIT_05s0020g02720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCTGCCTCTCAAACCCCTTTTCTTCTTCTCCTTCGTTTCTCTCGTCTCGGGCTCT
TATTCTCTGCTCCTTCCTGTCACCAAAGATGCTGCCACACTCCAGTACGTGACCCAGATT
CATCACGGCACTCCACTTGTTCCCATCAAGCTTGTGCTCGACCTCGGGGCTCCCTTTTTA
TGGCTTGATTGCAGTTCAGGCCATGTCTCATCCTCTAATACCCCAATCCTGTGTGGTTCG
ATTCAATGCTTAACTGCAAAGACCAGTGATTCTGGGCATGGGGGTGGAACCTCCACATGT
CGTCTCTCCCCGAAAAACACCATCACAGGACTGGCCGAAGCAGGAGAGCTAGCAGAGGAC
ATGGTAGCTGTGGAGGGGTCAGAGATGGGTTCTCGCTTCCTTTTCTCTTGTGCCCCCAAG
CCCCTCTTAAAAGGCCTGGCAAGTGGCACCGTCGGAATGTTGGGCCTCGGGAGGACTAGA
ATTGCACTGCCGTCACAGCTCGCCGCATCGGTCGGCCTCCACCGGAAATTCGCAGTCTGT
CTTTCATCATCCGAAGGCACCGTATTTTTGGAGAACGAAATTGCCGGAACAGACGTCTCA
AAGTCGCTCATGTACACGCCCCTCCTCCCGGGTCAGGATCCCAATTCCGAAGGCTATTTC
ATCAGTGTGAAATCAATCAGGATAAACGGCAGGGGAGTCTCTCTTGGGACAATCACCGGA
GGGACTAGGCTAAGCACAGTGGTTCCTTATACAACCATGAAGAGATCAGTCTACGACATA
TTTACTAAGGCTTACATCAAGGCTGCTGCTTCCATGAACATAACCAGGGTGGAATCCATG
GCACCTTTCGGGGTCTGCTTCAGGTCCGAATCCTCCGAGCCCGCTGTGCCCACCATTGAT
CTTGTGCTTCAGAGTGAGATGGTGAAGTGGAGGATACTGGGGAGGAATTCCATGGTGCGG
GTAAGCGATAAAGTTATGTGCTTGGGATTCTTGGATGGAGGTGTTGACCCAGTGTATTTT
TTTTTTTTTGTTCATATAAAAAGACATCATCAATCAAATGATACCATATCTATATCTTAT
GTTATATTATTTGCACCATAG

Peptide Sequence

PEP ID

VIT_05s0020g02720.t01
PEP Infomation

pep chromosome:12X:5:4453502:4455917:1 gene:VIT_05s0020g02720 transcript:VIT_05s0020g02720.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALPLKPLFFFSFVSLVSGSYSLLLPVTKDAATLQYVTQIHHGTPLVPIKLVLDLGAPFL
WLDCSSGHVSSSNTPILCGSIQCLTAKTSDSGHGGGTSTCRLSPKNTITGLAEAGELAED
MVAVEGSEMGSRFLFSCAPKPLLKGLASGTVGMLGLGRTRIALPSQLAASVGLHRKFAVC
LSSSEGTVFLENEIAGTDVSKSLMYTPLLPGQDPNSEGYFISVKSIRINGRGVSLGTITG
GTRLSTVVPYTTMKRSVYDIFTKAYIKAAASMNITRVESMAPFGVCFRSESSEPAVPTID
LVLQSEMVKWRILGRNSMVRVSDKVMCLGFLDGGVDPVYFFFFVHIKRHHQSNDTISISY
VILFAP

Transcript Sequence

Transcript ID

VIT_05s0020g02720.t01
Transcript Infomation

cdna chromosome:12X:5:4453502:4455917:1 gene:VIT_05s0020g02720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TACCAATTCCAACCCCATCTCTCTCCCTTTTTCTTCTCCATGGCTCTGCCTCTCAAACCC
CTTTTCTTCTTCTCCTTCGTTTCTCTCGTCTCGGGCTCTTATTCTCTGCTCCTTCCTGTC
ACCAAAGATGCTGCCACACTCCAGTACGTGACCCAGATTCATCACGGCACTCCACTTGTT
CCCATCAAGCTTGTGCTCGACCTCGGGGCTCCCTTTTTATGGCTTGATTGCAGTTCAGGC
CATGTCTCATCCTCTAATACCCCAATCCTGTGTGGTTCGATTCAATGCTTAACTGCAAAG
ACCAGTGATTCTGGGCATGGGGGTGGAACCTCCACATGTCGTCTCTCCCCGAAAAACACC
ATCACAGGACTGGCCGAAGCAGGAGAGCTAGCAGAGGACATGGTAGCTGTGGAGGGGTCA
GAGATGGGTTCTCGCTTCCTTTTCTCTTGTGCCCCCAAGCCCCTCTTAAAAGGCCTGGCA
AGTGGCACCGTCGGAATGTTGGGCCTCGGGAGGACTAGAATTGCACTGCCGTCACAGCTC
GCCGCATCGGTCGGCCTCCACCGGAAATTCGCAGTCTGTCTTTCATCATCCGAAGGCACC
GTATTTTTGGAGAACGAAATTGCCGGAACAGACGTCTCAAAGTCGCTCATGTACACGCCC
CTCCTCCCGGGTCAGGATCCCAATTCCGAAGGCTATTTCATCAGTGTGAAATCAATCAGG
ATAAACGGCAGGGGAGTCTCTCTTGGGACAATCACCGGAGGGACTAGGCTAAGCACAGTG
GTTCCTTATACAACCATGAAGAGATCAGTCTACGACATATTTACTAAGGCTTACATCAAG
GCTGCTGCTTCCATGAACATAACCAGGGTGGAATCCATGGCACCTTTCGGGGTCTGCTTC
AGGTCCGAATCCTCCGAGCCCGCTGTGCCCACCATTGATCTTGTGCTTCAGAGTGAGATG
GTGAAGTGGAGGATACTGGGGAGGAATTCCATGGTGCGGGTAAGCGATAAAGTTATGTGC
TTGGGATTCTTGGATGGAGGTGTTGACCCAGTGTATTTTTTTTTTTTTGTTCATATAAAA
AGACATCATCAATCAAATGATACCATATCTATATCTTATGTTATATTATTTGCACCATAG