Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g02690.t01
CDS Infomation

cds chromosome:12X:5:4417494:4420322:1 gene:VIT_05s0020g02690 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCAAGGAGGAGTTTTTGAAGATCCAGACCTGTGTGCTGAAGGTGAACATTCACTGT
GACGGGTGCAAGCACAAGGTCAAGAAAATCTTACATAAAATTGAAGGGGTTTACACAACC
AAAATAGATGCAGATCTGGGGAAGGTGACAGTTTCAGGAAATGTAGACGCGGCCACGCTG
ATGAAAAAGCTAAACAAAGCTGGAAAACATGCCGAGCTCTGGGGTGCTCCGAAGGCCAAC
AACCAAAACCAACTGAATAACCAGTTGAAGAACTTGCAACTTGATAATGGCGGCAAAGGT
GGGGGCAAAAAGGGCGGAAACAACAACGGCGGCAACCAGCCTAAAGGAGGACATCCCAAC
CCACAGCAGCAGCTTCAGCAACTCCAGCAGCAGATGAAAGGCTTCCAAGATCTGAAGCTG
CCCCCCTTGGGTCAGGCTCCCAAAACCGTCAAGTTCAGCTTGCCTGAGGATGATGGTATG
AGTGATGAATTTGATGATGAGTTCGATGAAGAGGATTTAGAAGATGATGAGTTTTACGAT
GAGTTGGACGATATTCCCCATCAGCTTCCCAACAAAATGAAACCGAATGCGGTTAATGGG
CAGGGGACTCAGATGCCCAACCTCATGATGTTGAATGGTATGATGAACGCCCAGCAGATG
ATGAATGCCCAGGCCATGATGAATGACAAGAAGGCTGGTGGTAATGTTGGGAACGGTAAG
AAGGGTGGCGGTGGCGGTGCTGTGCCAATTCAGATAAATGGCAATGATGGGAAAAATGGT
GGAAAGAAAGGCGGTGGCGGAGGTAATAATAACGGAGGGAATCAAAATCAAGGTGGTATC
GGCGGCGGTGCTAAGAATGGTGGCAAAAATGGCGGTGGGGCGCCATCGGAGGGTAAAAAT
GGTAACAACGCTGGCGGTGGGAACAATAAGATCGGTAATAATGGCGGCGGTGGTAACGGT
AACGGTGGTAAGAAAGGCGGAGCCGCGAATGATGTTCATGCCATTAACAACATGCCCAAT
GCGATGCATAACATGGCTGCCATTCGGGGCCTTGGCGGAGGGAATATGGGCCAGATGCCC
ATGGGCCCCATGGGGAACATGCCCATGGGCCAGATGGGCAACATGTCCATGGCCCAAATG
GGTAATAACATGCCTGCAGTGCAGGGCCTACCAGCCGGCGCCATAAACGCCGGTGGTGCC
GGCGGCGGCGCCCCCCCTGGTTACGGCGGCGGCGTCCCCCCTGGTTACTTCCAAGGAGCC
GGCCCGGAAGTGATGGCTGGAAACCCCTACTACCAGCAGCAACTGGCTGCCATGATGATG
AACCAGCAACGCGCACATGGCAACGAGCGGTTCCAGCCCATGATGTATGCTCGCCCCCCT
CCTGCAGTCAATTACTTGCCCCCATACCCACCTCAGCCCGACCCCTACACCCATTTCTTC
AGTGACGAGAACACCTCGAGCTGCAATGTCATGTGA

Peptide Sequence

PEP ID

VIT_05s0020g02690.t01
PEP Infomation

pep chromosome:12X:5:4417494:4420322:1 gene:VIT_05s0020g02690 transcript:VIT_05s0020g02690.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSKEEFLKIQTCVLKVNIHCDGCKHKVKKILHKIEGVYTTKIDADLGKVTVSGNVDAATL
MKKLNKAGKHAELWGAPKANNQNQLNNQLKNLQLDNGGKGGGKKGGNNNGGNQPKGGHPN
PQQQLQQLQQQMKGFQDLKLPPLGQAPKTVKFSLPEDDGMSDEFDDEFDEEDLEDDEFYD
ELDDIPHQLPNKMKPNAVNGQGTQMPNLMMLNGMMNAQQMMNAQAMMNDKKAGGNVGNGK
KGGGGGAVPIQINGNDGKNGGKKGGGGGNNNGGNQNQGGIGGGAKNGGKNGGGAPSEGKN
GNNAGGGNNKIGNNGGGGNGNGGKKGGAANDVHAINNMPNAMHNMAAIRGLGGGNMGQMP
MGPMGNMPMGQMGNMSMAQMGNNMPAVQGLPAGAINAGGAGGGAPPGYGGGVPPGYFQGA
GPEVMAGNPYYQQQLAAMMMNQQRAHGNERFQPMMYARPPPAVNYLPPYPPQPDPYTHFF
SDENTSSCNVM

Transcript Sequence

Transcript ID

VIT_05s0020g02690.t01
Transcript Infomation

cdna chromosome:12X:5:4417494:4420322:1 gene:VIT_05s0020g02690 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACCCCCCACTCTCTCTCTCTCTCCGCCAGTGCTCTGTGGCTTTGCCCTACCCCCTGCTC
TCTCTCACTCACTCTCTTTCTCTCTCTTTCTAACCCTGAAATAGAGGAAGCAGAAACAGC
AGAGGAGTTTAATGTCTACCACCCACCGCCTCTGAACTCTCTCTCTCTCTCTCTTTCTCT
CTATCTGAGAGACTGGACCTTGTTGTCTCTCTAACTTTCTCTGCTCAGAGGGCTCAGACC
CCCTTTGTTTTCTCTCATTTTCTCTCTCTGTTTGCTTGGGGAAAGACCCAAAAGAGGCAA
CGGGGGGGAACCTTTTGTGCGGGACGCTTTATGTAATTCGTTTTCTTCAGTCTTCGGTTC
TTCTTCTTCTCCTTATTCAAGTCTATCCGCACACCACCCTTTTTATCTTTCCCATCATTG
TACCCTTGTTCTTGTTTCACTCGAGTTGGAGATATGAGCAAGGAGGAGTTTTTGAAGATC
CAGACCTGTGTGCTGAAGGTGAACATTCACTGTGACGGGTGCAAGCACAAGGTCAAGAAA
ATCTTACATAAAATTGAAGGGGTTTACACAACCAAAATAGATGCAGATCTGGGGAAGGTG
ACAGTTTCAGGAAATGTAGACGCGGCCACGCTGATGAAAAAGCTAAACAAAGCTGGAAAA
CATGCCGAGCTCTGGGGTGCTCCGAAGGCCAACAACCAAAACCAACTGAATAACCAGTTG
AAGAACTTGCAACTTGATAATGGCGGCAAAGGTGGGGGCAAAAAGGGCGGAAACAACAAC
GGCGGCAACCAGCCTAAAGGAGGACATCCCAACCCACAGCAGCAGCTTCAGCAACTCCAG
CAGCAGATGAAAGGCTTCCAAGATCTGAAGCTGCCCCCCTTGGGTCAGGCTCCCAAAACC
GTCAAGTTCAGCTTGCCTGAGGATGATGGTATGAGTGATGAATTTGATGATGAGTTCGAT
GAAGAGGATTTAGAAGATGATGAGTTTTACGATGAGTTGGACGATATTCCCCATCAGCTT
CCCAACAAAATGAAACCGAATGCGGTTAATGGGCAGGGGACTCAGATGCCCAACCTCATG
ATGTTGAATGGTATGATGAACGCCCAGCAGATGATGAATGCCCAGGCCATGATGAATGAC
AAGAAGGCTGGTGGTAATGTTGGGAACGGTAAGAAGGGTGGCGGTGGCGGTGCTGTGCCA
ATTCAGATAAATGGCAATGATGGGAAAAATGGTGGAAAGAAAGGCGGTGGCGGAGGTAAT
AATAACGGAGGGAATCAAAATCAAGGTGGTATCGGCGGCGGTGCTAAGAATGGTGGCAAA
AATGGCGGTGGGGCGCCATCGGAGGGTAAAAATGGTAACAACGCTGGCGGTGGGAACAAT
AAGATCGGTAATAATGGCGGCGGTGGTAACGGTAACGGTGGTAAGAAAGGCGGAGCCGCG
AATGATGTTCATGCCATTAACAACATGCCCAATGCGATGCATAACATGGCTGCCATTCGG
GGCCTTGGCGGAGGGAATATGGGCCAGATGCCCATGGGCCCCATGGGGAACATGCCCATG
GGCCAGATGGGCAACATGTCCATGGCCCAAATGGGTAATAACATGCCTGCAGTGCAGGGC
CTACCAGCCGGCGCCATAAACGCCGGTGGTGCCGGCGGCGGCGCCCCCCCTGGTTACGGC
GGCGGCGTCCCCCCTGGTTACTTCCAAGGAGCCGGCCCGGAAGTGATGGCTGGAAACCCC
TACTACCAGCAGCAACTGGCTGCCATGATGATGAACCAGCAACGCGCACATGGCAACGAG
CGGTTCCAGCCCATGATGTATGCTCGCCCCCCTCCTGCAGTCAATTACTTGCCCCCATAC
CCACCTCAGCCCGACCCCTACACCCATTTCTTCAGTGACGAGAACACCTCGAGCTGCAAT
GTCATGTGAAATCCCTGGATTTCCCCTGCTCCGACATGTTTTGTTAAGGTCACAGCGGGT
GGCGGTGGCAGCTGCCCAGTTACAGCAAAAGGAACTCCCGTCTCATGCCATGCACACATT
CTGGAGATGGGTTCATTTTTAGTTGAATTATCTTCTCTTTTTCCTTTCTTTTTCCTTTTT
TTTTTTAATCCCTTAATTTTCCTTCTCATCCTGAGTTGAATTAGGGTTTTAATTATGAAT
AGGGGGAGTATTTATAGATAATATATTAAAGTTTTAGAGGAGTCTGAGATGTAAGTGGGA
GACGGACGGTGGTGGGGCTTTCTCATGGGGAGATGTTTATATGGTGTTTATATGTTGAAA
ACAAAAATAAGATGGAAAAGGAGAAATGGGAATTTAAAACAAAAGCCCATCTCTCTGCCC
GTTTCTCTCCCAAGTAGTCCCCAACACTCTTTACTTGCTATTCTTCTCTCCTTTCTCTTT
CACACCCGCGTGTATGTTATGATTGGG