Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g02480.t01
CDS Infomation

cds chromosome:12X:5:4134992:4139324:-1 gene:VIT_05s0020g02480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:D7T6P4]
Sequence

ATGGCACAGATTTTGGCACCATCTACTCAATGGCAGATGAGAATGACAAAAAACCCTGCC
AATGCAAGTCCCTTTACAACAAAGATGTGGGGCTCTCTGTTCCTGAAACAAAAAACAAAA
GGAACAGCAAAATTTTCTACTAAATTCAGAGTGTGTGCTTCAAAGTCTGAAAGCAGCACC
GTCAACAGGCTTGATGATCTGCTGAATATGGACATCAGACCATACACGGATAAGATCATT
GCTGAATACGTTTGGATTGGTGGGACTGGGATTGATCTGCGTAGCAAGTCAAGGACAATC
TCCAAACCTGTGGAGCACCCATCTGAGCTTCCCAAGTGGAATTATGATGGATCGAGTACT
GGACAGGCACCCGGAGAAGATAGTGAAGTGATTTTATACCCTCAAGCAATCTTTAAGGAC
CCTTTTCGTGGTGGTAACAACATCTTGGTAATTTGTGATTCATACACACCAGCAGGTGAG
CCCATCCCTACAAACAAGCGCCACAGGGCTGCTGAGATCTTTGGTAACAAGAAAGTCATA
GACGAAGTTCCATGGTTTGGAATAGAGCAAGAGTACACTTTGCTTCAACCAAATGTGAAG
TGGCCTTTGGGCTGGCCTGTAGGTGCCTATCCTGGTCCTCAGGGTCCTTATTACTGTGCT
GCTGGGGCTGACAAGTCATTTGGCCGTGACATCTCAGATGCTCACTACAAGGCTTGTTTA
TATGCGGGAATTAACATTAGTGGCACCAATGGGGAAGTTATGCCAGGCCAGTGGGAATAT
CAAGTTGGTCCTAGTGTTGGTATTGAAGCTGGGGATCATATCTGGTGTTCTAGATACATT
CTTGAGAGGATTACTGAACAAGCTGGTGTTGTCCTCACACTTGATCCAAAGCCGATAGAG
GGGGATTGGAATGGTGCAGGATGCCATACCAATTACAGTACAAAGAGCATGAGAGAAGAT
GGAGGCTATGAACTGATAAAGAAGGCAATTCTGAATCTGTCACTTCGCCACAAAGAACAT
ATCAGTGCCTATGGAGAAGGAAATGAGAGAAGATTGACAGGAAAGCATGAAACAGCAAAC
ATCAACACATTTTCCTGGGGAGTGGCTAACCGTGGTTGTTCAGTTCGTGTGGGGCGTGAC
ACTGAGAAGCAAGGCAAAGGTTATTTGGAAGATCGCCGTCCAGCTTCAAACATGGATCCT
TACATTGTGACCTCGTTACTAGCAGAAACTACAATACTATGGGAGCCAACACTAGAGGCT
GAAGCTCTTGCAGCTCAGAAGCTGGCATTGAAGGTCTAA

Peptide Sequence

PEP ID

VIT_05s0020g02480.t01
PEP Infomation

pep chromosome:12X:5:4134992:4139324:-1 gene:VIT_05s0020g02480 transcript:VIT_05s0020g02480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:D7T6P4]
Sequence

MAQILAPSTQWQMRMTKNPANASPFTTKMWGSLFLKQKTKGTAKFSTKFRVCASKSESST
VNRLDDLLNMDIRPYTDKIIAEYVWIGGTGIDLRSKSRTISKPVEHPSELPKWNYDGSST
GQAPGEDSEVILYPQAIFKDPFRGGNNILVICDSYTPAGEPIPTNKRHRAAEIFGNKKVI
DEVPWFGIEQEYTLLQPNVKWPLGWPVGAYPGPQGPYYCAAGADKSFGRDISDAHYKACL
YAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWCSRYILERITEQAGVVLTLDPKPIE
GDWNGAGCHTNYSTKSMREDGGYELIKKAILNLSLRHKEHISAYGEGNERRLTGKHETAN
INTFSWGVANRGCSVRVGRDTEKQGKGYLEDRRPASNMDPYIVTSLLAETTILWEPTLEA
EALAAQKLALKV

Transcript Sequence

Transcript ID

VIT_05s0020g02480.t01
Transcript Infomation

cdna chromosome:12X:5:4134992:4139324:-1 gene:VIT_05s0020g02480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glutamine synthetase [Source:UniProtKB/TrEMBL;Acc:D7T6P4]
Sequence

CTTCCCTTGGTGTCTCCAAAGAGACCAAAAACGATTTTCCTCCACTCAAACCCATAGCTG
ATAGCCCTATCTCCAAATGAAAAGTCAATAAACCTTTATTTAAAGACTAGCACAACAATA
GCCATTTGGTCTCTGCATATCCATTTCCTGTCTCCCTTGCTCCCTCTCCAGTTCTGGGAA
AACCCACCTTTCAGTTTGCTGTTCAACCCATTTCCAGTGACTCCCAGGGCTAGGTGAAAA
TGGCACAGATTTTGGCACCATCTACTCAATGGCAGATGAGAATGACAAAAAACCCTGCCA
ATGCAAGTCCCTTTACAACAAAGATGTGGGGCTCTCTGTTCCTGAAACAAAAAACAAAAG
GAACAGCAAAATTTTCTACTAAATTCAGAGTGTGTGCTTCAAAGTCTGAAAGCAGCACCG
TCAACAGGCTTGATGATCTGCTGAATATGGACATCAGACCATACACGGATAAGATCATTG
CTGAATACGTTTGGATTGGTGGGACTGGGATTGATCTGCGTAGCAAGTCAAGGACAATCT
CCAAACCTGTGGAGCACCCATCTGAGCTTCCCAAGTGGAATTATGATGGATCGAGTACTG
GACAGGCACCCGGAGAAGATAGTGAAGTGATTTTATACCCTCAAGCAATCTTTAAGGACC
CTTTTCGTGGTGGTAACAACATCTTGGTAATTTGTGATTCATACACACCAGCAGGTGAGC
CCATCCCTACAAACAAGCGCCACAGGGCTGCTGAGATCTTTGGTAACAAGAAAGTCATAG
ACGAAGTTCCATGGTTTGGAATAGAGCAAGAGTACACTTTGCTTCAACCAAATGTGAAGT
GGCCTTTGGGCTGGCCTGTAGGTGCCTATCCTGGTCCTCAGGGTCCTTATTACTGTGCTG
CTGGGGCTGACAAGTCATTTGGCCGTGACATCTCAGATGCTCACTACAAGGCTTGTTTAT
ATGCGGGAATTAACATTAGTGGCACCAATGGGGAAGTTATGCCAGGCCAGTGGGAATATC
AAGTTGGTCCTAGTGTTGGTATTGAAGCTGGGGATCATATCTGGTGTTCTAGATACATTC
TTGAGAGGATTACTGAACAAGCTGGTGTTGTCCTCACACTTGATCCAAAGCCGATAGAGG
GGGATTGGAATGGTGCAGGATGCCATACCAATTACAGTACAAAGAGCATGAGAGAAGATG
GAGGCTATGAACTGATAAAGAAGGCAATTCTGAATCTGTCACTTCGCCACAAAGAACATA
TCAGTGCCTATGGAGAAGGAAATGAGAGAAGATTGACAGGAAAGCATGAAACAGCAAACA
TCAACACATTTTCCTGGGGAGTGGCTAACCGTGGTTGTTCAGTTCGTGTGGGGCGTGACA
CTGAGAAGCAAGGCAAAGGTTATTTGGAAGATCGCCGTCCAGCTTCAAACATGGATCCTT
ACATTGTGACCTCGTTACTAGCAGAAACTACAATACTATGGGAGCCAACACTAGAGGCTG
AAGCTCTTGCAGCTCAGAAGCTGGCATTGAAGGTCTAAATTCATTTTATTGAAGATGGTA
TGAAGGGACTCAGAGAACAATCACCCGGGATTAATTTGTTAGGTGATGTGCAAGGAATAA
TTTTTTTGCACTTTTCTGCTAGATTCTGTAGAGAAAACTCCTGTAAATAAAGTCCTTGAA
GTGGTGGTTGTGTCTTCCTGGCCCTCTTTTTCAGTTTTAAGGATATTTCAC