Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g02080.t01
CDS Infomation

cds chromosome:12X:5:3820377:3827305:-1 gene:VIT_05s0020g02080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCACACTGCCCAGACTGTAACTGCCGGGGCTTCTGAGGCTTCTTCTCCACAGGCAAAT
CTCCAAATTCTGGAACGCACAAATGAAGTTGTTATAGATTCAGGACCAAGGGAGAAGCGA
CCAGATCTTTCACTTCAAATACCCCCTAGATCTGTAAATTTTGGCAATAGCAGGAGTGGA
AAAGGTTTACTCCAATCTCAAGGATCCGTAAAAGGTATTTCACCTTCAAAGGGCTTGTTA
CGGGGTTTAAGCTTCAAAAAAAAGACTGCTTTACCTGATGGTGAGAGAAGCTCCCTCCTC
AACTCAGATAGCAAGCCAACTGCAGAAAGTCCTAGGTTGTCCAACTTCATGGATGTTTTT
AATTGGAAAAGATCTACTTCTCTTCCTGTTTCACATGCATCAAACTTGTCCCCTTCAGTT
TCTACACCTACTTCAGCAAGGCCGTATAATGAACGTCCCAGGTCACATAAAGGGCCAGTT
CATATGGTGGATCCTGTGGTCTCAAGGTCCCTGTCCATACCTGGTCGAAATGTTGTCATT
GTAAGATCTGTATCTTTTGCTACTCGACATGAACAGGTTCAGACTGAATCTAGTGATGAT
CAAATTACTCCCGTTCCTATGCAAAATGAAGACGAAGAGATACCTGAAGAGGAGGCAGTT
TGCAGAATCTGTTTGGAAGTTTGTGAAGAAGGAAACACACTCAAGATGGAATGCAGTTGC
AAAGGTGCCCTCAGACTTTTACATGAAGACTGTGCGATTAAGTGGTTCACTACAAAAGGA
AATAAGACTTGCGATGTATGTAGGCAGGAGGTTCAGAACTTACCTGTAACCTTGCTTCGG
GTGCCAACTTCTGCTCAAAGGGATAACAGACAGGCACATAATCAACAGAGTTTAAATTCG
CGATCAGTAAGTGTTTGGCAGGACTTTGTGGTTCTTGTCTTGATTAGCACGATATGCTAT
TTCTTCTTCCTTGAGCAGCTCCTGATTCATGACATGAAGACTCAAGCAATTGTAGTTGCA
GCACCATTTTCTTTTACTTTGGGTCTTTTGGCATCTATTTTTGCAATTATCCTAGCAATC
AAGGAGTATATATGGACATATGCTGCTCTTGAGTTTGCGCTTGTGGCCATAATCGTCCAT
CTTTTCTATAGTTTGCTTCATCTGAAGGCGGTTTATGCCATAATGCTTTCTGCAGTTATG
GGTTTCGGCATAGCTATGAGCCTCAATTCATTGTACATTCAATTTTTTACTTGGCGGTTT
CAGATTACACAGAACTCCAACCCTGTATGA

Peptide Sequence

PEP ID

VIT_05s0020g02080.t01
PEP Infomation

pep chromosome:12X:5:3820377:3827305:-1 gene:VIT_05s0020g02080 transcript:VIT_05s0020g02080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MHTAQTVTAGASEASSPQANLQILERTNEVVIDSGPREKRPDLSLQIPPRSVNFGNSRSG
KGLLQSQGSVKGISPSKGLLRGLSFKKKTALPDGERSSLLNSDSKPTAESPRLSNFMDVF
NWKRSTSLPVSHASNLSPSVSTPTSARPYNERPRSHKGPVHMVDPVVSRSLSIPGRNVVI
VRSVSFATRHEQVQTESSDDQITPVPMQNEDEEIPEEEAVCRICLEVCEEGNTLKMECSC
KGALRLLHEDCAIKWFTTKGNKTCDVCRQEVQNLPVTLLRVPTSAQRDNRQAHNQQSLNS
RSVSVWQDFVVLVLISTICYFFFLEQLLIHDMKTQAIVVAAPFSFTLGLLASIFAIILAI
KEYIWTYAALEFALVAIIVHLFYSLLHLKAVYAIMLSAVMGFGIAMSLNSLYIQFFTWRF
QITQNSNPV

Transcript Sequence

Transcript ID

VIT_05s0020g02080.t01
Transcript Infomation

cdna chromosome:12X:5:3820377:3827305:-1 gene:VIT_05s0020g02080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTCTCTTAAGCACATTACTCCCAGGTGCGTCCCGTCTTCTTCTTCTTCCTCTAAATTCC
TGTTTTTCATTTTTGGATTAGTGTTTTGAGATTCTGGAGGACTGAAGAATGCACACTGCC
CAGACTGTAACTGCCGGGGCTTCTGAGGCTTCTTCTCCACAGGCAAATCTCCAAATTCTG
GAACGCACAAATGAAGTTGTTATAGATTCAGGACCAAGGGAGAAGCGACCAGATCTTTCA
CTTCAAATACCCCCTAGATCTGTAAATTTTGGCAATAGCAGGAGTGGAAAAGGTTTACTC
CAATCTCAAGGATCCGTAAAAGGTATTTCACCTTCAAAGGGCTTGTTACGGGGTTTAAGC
TTCAAAAAAAAGACTGCTTTACCTGATGGTGAGAGAAGCTCCCTCCTCAACTCAGATAGC
AAGCCAACTGCAGAAAGTCCTAGGTTGTCCAACTTCATGGATGTTTTTAATTGGAAAAGA
TCTACTTCTCTTCCTGTTTCACATGCATCAAACTTGTCCCCTTCAGTTTCTACACCTACT
TCAGCAAGGCCGTATAATGAACGTCCCAGGTCACATAAAGGGCCAGTTCATATGGTGGAT
CCTGTGGTCTCAAGGTCCCTGTCCATACCTGGTCGAAATGTTGTCATTGTAAGATCTGTA
TCTTTTGCTACTCGACATGAACAGGTTCAGACTGAATCTAGTGATGATCAAATTACTCCC
GTTCCTATGCAAAATGAAGACGAAGAGATACCTGAAGAGGAGGCAGTTTGCAGAATCTGT
TTGGAAGTTTGTGAAGAAGGAAACACACTCAAGATGGAATGCAGTTGCAAAGGTGCCCTC
AGACTTTTACATGAAGACTGTGCGATTAAGTGGTTCACTACAAAAGGAAATAAGACTTGC
GATGTATGTAGGCAGGAGGTTCAGAACTTACCTGTAACCTTGCTTCGGGTGCCAACTTCT
GCTCAAAGGGATAACAGACAGGCACATAATCAACAGAGTTTAAATTCGCGATCAGTAAGT
GTTTGGCAGGACTTTGTGGTTCTTGTCTTGATTAGCACGATATGCTATTTCTTCTTCCTT
GAGCAGCTCCTGATTCATGACATGAAGACTCAAGCAATTGTAGTTGCAGCACCATTTTCT
TTTACTTTGGGTCTTTTGGCATCTATTTTTGCAATTATCCTAGCAATCAAGGAGTATATA
TGGACATATGCTGCTCTTGAGTTTGCGCTTGTGGCCATAATCGTCCATCTTTTCTATAGT
TTGCTTCATCTGAAGGCGGTTTATGCCATAATGCTTTCTGCAGTTATGGGTTTCGGCATA
GCTATGAGCCTCAATTCATTGTACATTCAATTTTTTACTTGGCGGTTTCAGATTACACAG
AACTCCAACCCTGTATGACCAGACCTCTGAGAGGAACCACGTGCCCGGACAAAGCACTGG
AGTACATATTAGCTACCCAGGCACTATAATTATATTAAGAATTGTAGATTGCTTTTTTTT
TTTTTTTTTATGTATATTTTTAGTGGTCTAAGTGTCACACATGAACTTAAGAAAAACCTA
AATCTGTGACAAATATGCTATACTTTTGTTTTTTTTTTGGAATGAAGCATTTGTCAATAT
TTGATATACAAAA