Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g01910.t01
CDS Infomation

cds chromosome:12X:5:3615712:3618984:1 gene:VIT_05s0020g01910 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-amylase [Source:UniProtKB/TrEMBL;Acc:F6HDH8]
Sequence

ATGGAGGCTTTGGTGATTGGGACTTCTCAGGCTCAGATCGGGAGAGCACGTTTGGCTTAC
AGGAAGCTAGGATTTTATAATCCGGCGGCTCAGGGTTTCTCTCGGACGACTAGGATCTGT
TTTGATCATTCCCAGAGATGGAGAACGGATGGTGTTCGACTTAGTTTGAACGCTGTCCAT
TCGGAAGTTCTCCGATCTGAGAAAGTTTCCGGCGATGTGTCTACTTCTGCTAGAAGATCC
AAGCCAGTTGATGGTGTAAGATTATATGTTGGCCTGCCCCTGGATATAGTATCCGACTGC
AATACACTAAATCAGGTGAAAGCAGTTTCAGCTGGATTGAAGGCTCTAAAGCTAATGGGG
GTGGATGGTGTTGAGCTCCCAGTCTGGTGGGGAATAGCTGAGAAGGAAGCCATGGGAAAA
TATGATTGGTCTGGCTACCTTGCAGTTGCAGAGATGGTTCAAAAAATGGGTCTCAAGCTT
CATGTTTCACTGTGTTTCCATGCATCCAAACAACCAAAAGTCTCTCTTCCCCAGTGGGTA
TCACAGATTGGTGAAGTGCAGCCTGATATATTCCATACAGATCGGTTGGGGCAGCATTAC
AAGGAGTGCTTATCTCTGGCTGTTGATGATCTTCCTGTTCTAGATGGAAAGACACCAATC
CAAGTTTACCATGACTTCTGTGAGAGTTTCAAGACTTCGTTCTCACATTTCATGGGCTCA
ACAATCACAGGCATCTCAATGGGTCTAGGCCCAGATGGTGAGCTTCGATATCCTTCTCAT
CACAGGGTAAGCAAAAGGGGTAAAGTCCCTGGGGTTGGAGAATTTCAGTGTTATGACAAA
AACATGCTCAGCCTTCTCAAGCAACATGCTGAAGCAACTGGAAATCCGTATTGGGGTCTC
GGTGGTCCTCATGATGCCCCCCAGTATGATGGGATGCCAAACTCGAACAACTTCTTCAGG
GAGCATGGCGGATCATGGGAGACTCCATATGGTGATTTCTTCCTTTCTTGGTACTCAAAC
CAGCTAATATCTCATGGAAGTAGCCTCCTTTCCCTTGCTTCTACAGTTTTCTGCAACTCT
CCCGTTGCAATTTCTGGCAAGGTCCCAGTCGTTCATTCATGGTACAAAACCCGCTCGCAC
CCTTCTGAGCTAACAGCTGGCTTCTACAACACAGTTGACAAGGACGGCTATGAAAGGATT
GCTGAAATTTTTGCAAAAAATTCATGCAAAATGATCTTACCGGGAATGGACCTGTCAGAC
GATCACCAGCCGCAGGAGTCCCTCTCTAGCCCTGAATTATTACTCGCACAAATCAAGTCT
GCTTGCAGAAAGAGAGGAGTTCAGATTTCTGGGCAAAACTCGTCTGTTTCAGGAGCACCT
GGTGGTTTCGAACAGGTAAAGAAGAATTTGCTGGGCGAGGATGGAGTTGTGGACTTGTTC
ACTTATCAGAGAATGGGAGCCTATTTCTTCTCCCCTGAGCATTTTCCTTCATTTACTGAG
TTGGTTCGGAGCCTGAGTCAACCAGAGATGCTCTGGGATGACATGCCTAACGAAGAGGAA
GAAGTTGGTGAATCATTGCCGGTAGGATCAAGTTCAGACAAGAATCTCCAGATGCAAGTG
GCTTAG

Peptide Sequence

PEP ID

VIT_05s0020g01910.t01
PEP Infomation

pep chromosome:12X:5:3615712:3618984:1 gene:VIT_05s0020g01910 transcript:VIT_05s0020g01910.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-amylase [Source:UniProtKB/TrEMBL;Acc:F6HDH8]
Sequence

MEALVIGTSQAQIGRARLAYRKLGFYNPAAQGFSRTTRICFDHSQRWRTDGVRLSLNAVH
SEVLRSEKVSGDVSTSARRSKPVDGVRLYVGLPLDIVSDCNTLNQVKAVSAGLKALKLMG
VDGVELPVWWGIAEKEAMGKYDWSGYLAVAEMVQKMGLKLHVSLCFHASKQPKVSLPQWV
SQIGEVQPDIFHTDRLGQHYKECLSLAVDDLPVLDGKTPIQVYHDFCESFKTSFSHFMGS
TITGISMGLGPDGELRYPSHHRVSKRGKVPGVGEFQCYDKNMLSLLKQHAEATGNPYWGL
GGPHDAPQYDGMPNSNNFFREHGGSWETPYGDFFLSWYSNQLISHGSSLLSLASTVFCNS
PVAISGKVPVVHSWYKTRSHPSELTAGFYNTVDKDGYERIAEIFAKNSCKMILPGMDLSD
DHQPQESLSSPELLLAQIKSACRKRGVQISGQNSSVSGAPGGFEQVKKNLLGEDGVVDLF
TYQRMGAYFFSPEHFPSFTELVRSLSQPEMLWDDMPNEEEEVGESLPVGSSSDKNLQMQV
A

Transcript Sequence

Transcript ID

VIT_05s0020g01910.t01
Transcript Infomation

cdna chromosome:12X:5:3615712:3618984:1 gene:VIT_05s0020g01910 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-amylase [Source:UniProtKB/TrEMBL;Acc:F6HDH8]
Sequence

ATTCCGATTTTCTCTCCTACGTTTTTCCCTCATTTTCTTCCACGACTAGCATTCCTGCAA
AATTTCATTCCTTGGGAATTTCTGTTTTGGTTTTCATCTTCTCGTTTATTTGATCGAGAA
GTGAGATTTTGGGGTTTGAAAAGTTAGGTTTTGAGGTATGGAGGCTTTGGTGATTGGGAC
TTCTCAGGCTCAGATCGGGAGAGCACGTTTGGCTTACAGGAAGCTAGGATTTTATAATCC
GGCGGCTCAGGGTTTCTCTCGGACGACTAGGATCTGTTTTGATCATTCCCAGAGATGGAG
AACGGATGGTGTTCGACTTAGTTTGAACGCTGTCCATTCGGAAGTTCTCCGATCTGAGAA
AGTTTCCGGCGATGTGTCTACTTCTGCTAGAAGATCCAAGCCAGTTGATGGTGTAAGATT
ATATGTTGGCCTGCCCCTGGATATAGTATCCGACTGCAATACACTAAATCAGGTGAAAGC
AGTTTCAGCTGGATTGAAGGCTCTAAAGCTAATGGGGGTGGATGGTGTTGAGCTCCCAGT
CTGGTGGGGAATAGCTGAGAAGGAAGCCATGGGAAAATATGATTGGTCTGGCTACCTTGC
AGTTGCAGAGATGGTTCAAAAAATGGGTCTCAAGCTTCATGTTTCACTGTGTTTCCATGC
ATCCAAACAACCAAAAGTCTCTCTTCCCCAGTGGGTATCACAGATTGGTGAAGTGCAGCC
TGATATATTCCATACAGATCGGTTGGGGCAGCATTACAAGGAGTGCTTATCTCTGGCTGT
TGATGATCTTCCTGTTCTAGATGGAAAGACACCAATCCAAGTTTACCATGACTTCTGTGA
GAGTTTCAAGACTTCGTTCTCACATTTCATGGGCTCAACAATCACAGGCATCTCAATGGG
TCTAGGCCCAGATGGTGAGCTTCGATATCCTTCTCATCACAGGGTAAGCAAAAGGGGTAA
AGTCCCTGGGGTTGGAGAATTTCAGTGTTATGACAAAAACATGCTCAGCCTTCTCAAGCA
ACATGCTGAAGCAACTGGAAATCCGTATTGGGGTCTCGGTGGTCCTCATGATGCCCCCCA
GTATGATGGGATGCCAAACTCGAACAACTTCTTCAGGGAGCATGGCGGATCATGGGAGAC
TCCATATGGTGATTTCTTCCTTTCTTGGTACTCAAACCAGCTAATATCTCATGGAAGTAG
CCTCCTTTCCCTTGCTTCTACAGTTTTCTGCAACTCTCCCGTTGCAATTTCTGGCAAGGT
CCCAGTCGTTCATTCATGGTACAAAACCCGCTCGCACCCTTCTGAGCTAACAGCTGGCTT
CTACAACACAGTTGACAAGGACGGCTATGAAAGGATTGCTGAAATTTTTGCAAAAAATTC
ATGCAAAATGATCTTACCGGGAATGGACCTGTCAGACGATCACCAGCCGCAGGAGTCCCT
CTCTAGCCCTGAATTATTACTCGCACAAATCAAGTCTGCTTGCAGAAAGAGAGGAGTTCA
GATTTCTGGGCAAAACTCGTCTGTTTCAGGAGCACCTGGTGGTTTCGAACAGGTAAAGAA
GAATTTGCTGGGCGAGGATGGAGTTGTGGACTTGTTCACTTATCAGAGAATGGGAGCCTA
TTTCTTCTCCCCTGAGCATTTTCCTTCATTTACTGAGTTGGTTCGGAGCCTGAGTCAACC
AGAGATGCTCTGGGATGACATGCCTAACGAAGAGGAAGAAGTTGGTGAATCATTGCCGGT
AGGATCAAGTTCAGACAAGAATCTCCAGATGCAAGTGGCTTAGTAAGAAGTAGTAGTAAA
ACTGTATCCATGTGAATAGGGCATCATATTAAATAGACCCATTATTAGAAGAGGTTGTAT
TAGATATGATAGCCATACAAATTCTATGGAACCATGTACTGATTATATTTTCAAACAAAA
GCTGAATTATAAGGAAGAA