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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g01830.t01
CDS Infomation

cds chromosome:12X:5:3549467:3551839:1 gene:VIT_05s0020g01830 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 1D1 [Source:UniProtKB/Swiss-Prot;Acc:A7NW79]
Sequence

ATGTCGTCTGTGGATACTGAGAAGCCGGCTCCTCCTCCGTTGGAGACCGAGGCTCCGCCT
CCGCCTCCCCCTCCCCCTCCCCCTCCCCCTCCGCCTCCCCCTCCTCCGGCGGGCTACTCA
GCTTTGGATGTGGTTCTGAGGATATTGTTGCTTGGGTCGGCGGTGGCGTCGGTCGTGGTA
ATGGTGACCAGCGTGCAGACTAAGCTCATTGCTGTGGCGGGTGTCCCTGTTCTTGTGTCT
AATAAAGCCAAATTTCAAAACTCTCCGGCTTTCATATACTTTGTAGCAGCACTCTCAGTT
GTTGGCCTCTACAGCATCATCACTACGCTGGCATCCTTTATATTCATATCAAAGCCAAGT
TGCTCAACAAAGACCATTCTCCATCTAGCAATCTGGGATGTGCTGATGCTGGGGTTGGCA
GCTTCGGCCACAGGCACAGCCGGGGGCGTTGCATACGTCGGATTGAAAGGCAACTCTCAT
GTGGGCTGGAACAAGGTGTGCAACACTTATGATAAGTTCTGTCGCCATGTGGGAGGCTCG
ATTGCTGTTGCATTGTTCGCATCTATTCTGCTCGTCTTGCTTGTTTGGCTCTCTCTTTTC
ACCCTCTACTCTCGTATCAGAAAATAG

Peptide Sequence

PEP ID

VIT_05s0020g01830.t01
PEP Infomation

pep chromosome:12X:5:3549467:3551839:1 gene:VIT_05s0020g01830 transcript:VIT_05s0020g01830.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 1D1 [Source:UniProtKB/Swiss-Prot;Acc:A7NW79]
Sequence

MSSVDTEKPAPPPLETEAPPPPPPPPPPPPPPPPPPAGYSALDVVLRILLLGSAVASVVV
MVTSVQTKLIAVAGVPVLVSNKAKFQNSPAFIYFVAALSVVGLYSIITTLASFIFISKPS
CSTKTILHLAIWDVLMLGLAASATGTAGGVAYVGLKGNSHVGWNKVCNTYDKFCRHVGGS
IAVALFASILLVLLVWLSLFTLYSRIRK

Transcript Sequence

Transcript ID

VIT_05s0020g01830.t01
Transcript Infomation

cdna chromosome:12X:5:3549467:3551839:1 gene:VIT_05s0020g01830 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 1D1 [Source:UniProtKB/Swiss-Prot;Acc:A7NW79]
Sequence

TACTAAACAAACTTACCATTCACACCCATATTTGCTAGCCACCTTCCTCCGCGATGTCGT
CTGTGGATACTGAGAAGCCGGCTCCTCCTCCGTTGGAGACCGAGGCTCCGCCTCCGCCTC
CCCCTCCCCCTCCCCCTCCCCCTCCGCCTCCCCCTCCTCCGGCGGGCTACTCAGCTTTGG
ATGTGGTTCTGAGGATATTGTTGCTTGGGTCGGCGGTGGCGTCGGTCGTGGTAATGGTGA
CCAGCGTGCAGACTAAGCTCATTGCTGTGGCGGGTGTCCCTGTTCTTGTGTCTAATAAAG
CCAAATTTCAAAACTCTCCGGCTTTCATATACTTTGTAGCAGCACTCTCAGTTGTTGGCC
TCTACAGCATCATCACTACGCTGGCATCCTTTATATTCATATCAAAGCCAAGTTGCTCAA
CAAAGACCATTCTCCATCTAGCAATCTGGGATGTGCTGATGCTGGGGTTGGCAGCTTCGG
CCACAGGCACAGCCGGGGGCGTTGCATACGTCGGATTGAAAGGCAACTCTCATGTGGGCT
GGAACAAGGTGTGCAACACTTATGATAAGTTCTGTCGCCATGTGGGAGGCTCGATTGCTG
TTGCATTGTTCGCATCTATTCTGCTCGTCTTGCTTGTTTGGCTCTCTCTTTTCACCCTCT
ACTCTCGTATCAGAAAATAGTGTTTCGAGGGCATGCAGATATCTGAAACATGGCAATTGA
ATGTGTGTGATGTGTTGAAGCCTTAGCTTTGGTTCTGTGGTTTTAAGTGTTAAGAGGATT
CATGTGTAGTCGTGTGAACTGAATTGATTTTTTTCTTGTATCCATAATGTACATCCATTT
CCAATTATGAAACATGTATTTCGATCTTTGT