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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g01820.t01
CDS Infomation

cds chromosome:12X:5:3539749:3541944:-1 gene:VIT_05s0020g01820 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 1E2 [Source:UniProtKB/Swiss-Prot;Acc:A7NW78]
Sequence

ATGGAGGTAGAAAGCAAGACCAGCTTTGGAGGGATGGAGAGCAAAAGCAAGGAAGTGAAG
GTGGTGACCGGTGGGAAGTTGAGGCCCTTTGACTTGGTTTTGAGGGTGGTAGCCTTGGCT
CTGACTCTTGTTGCAGCTGTTCTCTTGGGGGTTGATAAGCAGACTAAGGTGGTGTCTTTG
CAGCTCCTTCCAACCTTGCCTCCCATGGATGTTCCAGTTACTGCTAAGTGGCGTTACTTA
TCTGCCTTTGTGTACTTTGTGGTCTCAAATGCCATAGCATGTTCCTATGCGGCACTGTCA
CTGTTGCTTTCAGTGGGGAACAGCAAGGGAAACAAAGGGTTGGGGTTGGCGATAACTGTG
ATGGACCTAGTGATGGTGGCGCTGCTCTTCTCCAGCAATGGAGCGGCGGGGGCCATAGGG
CTGATGGGGTATGAGGGGAACTCGCGCGTCCGATGGGGCAAGGTCTGCAACGTGTTCGGG
AAATTCTGCAACCAAGTGGCAGTTGCGCTTGGGCTGTCTTTTTTTGGAGGACTGGCTTTT
TTCTTGCTGGTTGTGATGGCGGCTTTCGCCCTCAATAAAAGGCATTGA

Peptide Sequence

PEP ID

VIT_05s0020g01820.t01
PEP Infomation

pep chromosome:12X:5:3539749:3541944:-1 gene:VIT_05s0020g01820 transcript:VIT_05s0020g01820.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 1E2 [Source:UniProtKB/Swiss-Prot;Acc:A7NW78]
Sequence

MEVESKTSFGGMESKSKEVKVVTGGKLRPFDLVLRVVALALTLVAAVLLGVDKQTKVVSL
QLLPTLPPMDVPVTAKWRYLSAFVYFVVSNAIACSYAALSLLLSVGNSKGNKGLGLAITV
MDLVMVALLFSSNGAAGAIGLMGYEGNSRVRWGKVCNVFGKFCNQVAVALGLSFFGGLAF
FLLVVMAAFALNKRH

Transcript Sequence

Transcript ID

VIT_05s0020g01820.t01
Transcript Infomation

cdna chromosome:12X:5:3539749:3541944:-1 gene:VIT_05s0020g01820 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 1E2 [Source:UniProtKB/Swiss-Prot;Acc:A7NW78]
Sequence

CTTAACTGCCTCTTCCCCCTACTCTGTAAAACTACGAGTTTTCCCTGAAAATGGAGGTAG
AAAGCAAGACCAGCTTTGGAGGGATGGAGAGCAAAAGCAAGGAAGTGAAGGTGGTGACCG
GTGGGAAGTTGAGGCCCTTTGACTTGGTTTTGAGGGTGGTAGCCTTGGCTCTGACTCTTG
TTGCAGCTGTTCTCTTGGGGGTTGATAAGCAGACTAAGGTGGTGTCTTTGCAGCTCCTTC
CAACCTTGCCTCCCATGGATGTTCCAGTTACTGCTAAGTGGCGTTACTTATCTGCCTTTG
TGTACTTTGTGGTCTCAAATGCCATAGCATGTTCCTATGCGGCACTGTCACTGTTGCTTT
CAGTGGGGAACAGCAAGGGAAACAAAGGGTTGGGGTTGGCGATAACTGTGATGGACCTAG
TGATGGTGGCGCTGCTCTTCTCCAGCAATGGAGCGGCGGGGGCCATAGGGCTGATGGGGT
ATGAGGGGAACTCGCGCGTCCGATGGGGCAAGGTCTGCAACGTGTTCGGGAAATTCTGCA
ACCAAGTGGCAGTTGCGCTTGGGCTGTCTTTTTTTGGAGGACTGGCTTTTTTCTTGCTGG
TTGTGATGGCGGCTTTCGCCCTCAATAAAAGGCATTGAGTAGAAATGCAGATGGTAATGT
GGGGTTGGATCATGGGATCGTGGATGGATGTTGTGTTTTCTTTTGTTTAGTTTGGATTTG
GATGTTTTATGAAAATGTGAAGGGATGGTGTATTGTGGACTTTCAGGGATTCGATTTCCT
AATGGATAGTAATTTTATATAAAATAAAATAAAATTTT