Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g01710.t01
CDS Infomation

cds chromosome:12X:5:3432657:3443017:1 gene:VIT_05s0020g01710 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTACAGTGGGTCCAGCGATGGCGAAGGCCACGAAGCCCCGCCGCGGAAGATCCCGCCG
GCGTCGTCGATGCTGTGGGTCCGGAACCTTCGCCGGTTCATCGGATCCGGTACCGGACTC
GGATCCGAAGCACTGATGGAACTTGAGACGAAAAGAATCTTGCTTGATATTTTTAAAGAG
AAGCAACAAAAGAGTGCTGAAGCTGGCTCAATCCCAAGTTTCTATAAAAAGAAACCTGAA
GAAGGGTCCATCAGTCACCGGGTCCAGAGGCTGGCAAAATATCGTTTTTTAAGGAAACAA
TCTGATCTTTTATTAAATGCTGATGATTTAGATGCAATGTGGGTTTGCTTAAGAGAAAAT
TGTGTGATTGATGATGCCACAAATGCTGAAAAGATGAATTATGAAGATTTTTGCCACATT
GCCTCTGTTTGTACGGAGCAAATAGGCCCTAAGTGTCGACGCTTTTTCAGTCCTTCCAAT
TTCATGAAGTTTGAGAAAGATGAGTCTGGAAGAATTGCCATTCTGCCCTTTTACCTTTAT
GTGATGCGCACAGTTTCACTTACACAGGCCAGAATTGATATGAGTGAGCTTGATGAGGAT
TCTGATGGCTTCCTTCAACCCCATGAAATGGAGGCCTATATACGAGGACTTATTCCCAAT
CTGGCACAACTACGGGATATGCCTGCAGCCTTTGTTCAAATGTACTGCCGCATTGCTGCG
CACAAATTCTTCTTCTTTTGTGATCCTCATAGACGAGGAAAAGCCTGCATAAAGAAGGTG
TTGCTTAGTAACTGTCTCCAGGAATTAATGGAACTGCACCAGGAAAGTGAGGAAGAAGTC
ACTGATACCGAGCAAGCTGAAAACTGGTTCTCTTTGACATCTGCCCAACGAATATGTGAT
ATGTTTCTTGCACTCGATAAAGATATGAATGGAACATTGAGCAAGCAAGAGCTTCGAGAA
TATGCAGATGGAACATTAACTGAAATTTTCATTGAGAGAGCATTTGATGAGCACGTTCGT
CGTGGCAAAAGTGGAGGGGGTAATGCTCGGGAGATGGATTTTGAAAGTTTTCTTGATTTT
GTTCTGGCCCTCGAAAATAAAGACACGCCAGAAGGTTTAACATATTTGTTTCGGTGCCTC
GATCTTCATGGACGGGGATACCTCACAACAGCAGATATTCACACGCTTTTCAGGGATGTA
CACCAGAAATGGATTGAGGGAGGCAATTATGAACTATGTATTGAGGATGTTAGGGATGAA
ATTTGGGATATGGTGAAGCCAGCTGATGAGCTAAGAATTACATTGGCTGATCTACTAGCT
TGTAAACAGGGTGGAACTGTTGCCAGCATGCTAATTGATGTGCGTGGGTTCTGGGCGCAT
GACAATAGAGAAAATCTTCTCCAAGAAGAGGAAGAGCCAGAAGAAGAATGA

Peptide Sequence

PEP ID

VIT_05s0020g01710.t01
PEP Infomation

pep chromosome:12X:5:3432657:3443017:1 gene:VIT_05s0020g01710 transcript:VIT_05s0020g01710.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MYSGSSDGEGHEAPPRKIPPASSMLWVRNLRRFIGSGTGLGSEALMELETKRILLDIFKE
KQQKSAEAGSIPSFYKKKPEEGSISHRVQRLAKYRFLRKQSDLLLNADDLDAMWVCLREN
CVIDDATNAEKMNYEDFCHIASVCTEQIGPKCRRFFSPSNFMKFEKDESGRIAILPFYLY
VMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNLAQLRDMPAAFVQMYCRIAA
HKFFFFCDPHRRGKACIKKVLLSNCLQELMELHQESEEEVTDTEQAENWFSLTSAQRICD
MFLALDKDMNGTLSKQELREYADGTLTEIFIERAFDEHVRRGKSGGGNAREMDFESFLDF
VLALENKDTPEGLTYLFRCLDLHGRGYLTTADIHTLFRDVHQKWIEGGNYELCIEDVRDE
IWDMVKPADELRITLADLLACKQGGTVASMLIDVRGFWAHDNRENLLQEEEEPEEE

Transcript Sequence

Transcript ID

VIT_05s0020g01710.t01
Transcript Infomation

cdna chromosome:12X:5:3432657:3443017:1 gene:VIT_05s0020g01710 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACTCGTCCGAGGTGATTCGGTTTCGAAGAATAGTGACTCGCCATGTACAGTGGGTCCAGC
GATGGCGAAGGCCACGAAGCCCCGCCGCGGAAGATCCCGCCGGCGTCGTCGATGCTGTGG
GTCCGGAACCTTCGCCGGTTCATCGGATCCGGTACCGGACTCGGATCCGAAGCACTGATG
GAACTTGAGACGAAAAGAATCTTGCTTGATATTTTTAAAGAGAAGCAACAAAAGAGTGCT
GAAGCTGGCTCAATCCCAAGTTTCTATAAAAAGAAACCTGAAGAAGGGTCCATCAGTCAC
CGGGTCCAGAGGCTGGCAAAATATCGTTTTTTAAGGAAACAATCTGATCTTTTATTAAAT
GCTGATGATTTAGATGCAATGTGGGTTTGCTTAAGAGAAAATTGTGTGATTGATGATGCC
ACAAATGCTGAAAAGATGAATTATGAAGATTTTTGCCACATTGCCTCTGTTTGTACGGAG
CAAATAGGCCCTAAGTGTCGACGCTTTTTCAGTCCTTCCAATTTCATGAAGTTTGAGAAA
GATGAGTCTGGAAGAATTGCCATTCTGCCCTTTTACCTTTATGTGATGCGCACAGTTTCA
CTTACACAGGCCAGAATTGATATGAGTGAGCTTGATGAGGATTCTGATGGCTTCCTTCAA
CCCCATGAAATGGAGGCCTATATACGAGGACTTATTCCCAATCTGGCACAACTACGGGAT
ATGCCTGCAGCCTTTGTTCAAATGTACTGCCGCATTGCTGCGCACAAATTCTTCTTCTTT
TGTGATCCTCATAGACGAGGAAAAGCCTGCATAAAGAAGGTGTTGCTTAGTAACTGTCTC
CAGGAATTAATGGAACTGCACCAGGAAAGTGAGGAAGAAGTCACTGATACCGAGCAAGCT
GAAAACTGGTTCTCTTTGACATCTGCCCAACGAATATGTGATATGTTTCTTGCACTCGAT
AAAGATATGAATGGAACATTGAGCAAGCAAGAGCTTCGAGAATATGCAGATGGAACATTA
ACTGAAATTTTCATTGAGAGAGCATTTGATGAGCACGTTCGTCGTGGCAAAAGTGGAGGG
GGTAATGCTCGGGAGATGGATTTTGAAAGTTTTCTTGATTTTGTTCTGGCCCTCGAAAAT
AAAGACACGCCAGAAGGTTTAACATATTTGTTTCGGTGCCTCGATCTTCATGGACGGGGA
TACCTCACAACAGCAGATATTCACACGCTTTTCAGGGATGTACACCAGAAATGGATTGAG
GGAGGCAATTATGAACTATGTATTGAGGATGTTAGGGATGAAATTTGGGATATGGTGAAG
CCAGCTGATGAGCTAAGAATTACATTGGCTGATCTACTAGCTTGTAAACAGGGTGGAACT
GTTGCCAGCATGCTAATTGATGTGCGTGGGTTCTGGGCGCATGACAATAGAGAAAATCTT
CTCCAAGAAGAGGAAGAGCCAGAAGAAGAATGAAAGGCATGAGATACTTTAGGAGGCTAG
GAGCTGCCCTTTGTACTAACATCAAATTTAGTGTAATTTGTGGGATTGTATCTTTACCTA
ATGGAATGTTTT