Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g01410.t01
CDS Infomation

cds chromosome:12X:5:3130862:3131580:1 gene:VIT_05s0020g01410 gene_biotype:protein_coding transcript_biotype:protein_coding description:60S ribosome subunit biogenesis protein NIP7 homolog [Source:UniProtKB/TrEMBL;Acc:F6HE68]
Sequence

ATGAGGCCACTGGACGAGAACGAGACCACGGCAGTATTCGAGAAGCTCTTCAAATTCACG
GGCAACAATCTCAAGAACATCGTCGAAAACCCATCATACGAAGGCCCTGATCCTAACGCT
GGCAGATACTGTTTTCGTCTCCAGAAGAACCGAGTTTACTACGTGAGCGAGTCGATGGTC
AAGCGAGCCACCAACATTGGCCGAGCCCAGCTGGTCTCGCTTGGCACGTGCATCGGCAAG
TTCACCAAGGGCGGTAAGTTTCATCTCACCGTCCAGTCGGTGAATCTATTAGCCGCAAAT
GCCAAGCACAAGGTCTGGCTTAAACCCACATCGGAAATGTCGTTTTTATACGGAAATCAT
GTTTTGAAAGGTGGGTTGGGGAGGATTACGGAGAACATTGTGGCGGGTGATGGGGTTGTG
GTGTTTTCCATGTCGGATGTGCCTTTGGGGTTCGGGATTGCGGCAAAGTCGACTCAGGAT
TGTAGGAAGTTGGACCCCAATGGGATTGTTGTGCTCCATCAGTCGGATATCGGGGAGTAT
TTGAGAATGGAGGATGAACTTTGA

Peptide Sequence

PEP ID

VIT_05s0020g01410.t01
PEP Infomation

pep chromosome:12X:5:3130862:3131580:1 gene:VIT_05s0020g01410 transcript:VIT_05s0020g01410.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:60S ribosome subunit biogenesis protein NIP7 homolog [Source:UniProtKB/TrEMBL;Acc:F6HE68]
Sequence

MRPLDENETTAVFEKLFKFTGNNLKNIVENPSYEGPDPNAGRYCFRLQKNRVYYVSESMV
KRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNH
VLKGGLGRITENIVAGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY
LRMEDEL

Transcript Sequence

Transcript ID

VIT_05s0020g01410.t01
Transcript Infomation

cdna chromosome:12X:5:3130862:3131580:1 gene:VIT_05s0020g01410 gene_biotype:protein_coding transcript_biotype:protein_coding description:60S ribosome subunit biogenesis protein NIP7 homolog [Source:UniProtKB/TrEMBL;Acc:F6HE68]
Sequence

GAAAATTTTAAAAACCCCAACATCCCAAACCCTAACGGGGAATTTGAAAGCACGATGAGG
CCACTGGACGAGAACGAGACCACGGCAGTATTCGAGAAGCTCTTCAAATTCACGGGCAAC
AATCTCAAGAACATCGTCGAAAACCCATCATACGAAGGCCCTGATCCTAACGCTGGCAGA
TACTGTTTTCGTCTCCAGAAGAACCGAGTTTACTACGTGAGCGAGTCGATGGTCAAGCGA
GCCACCAACATTGGCCGAGCCCAGCTGGTCTCGCTTGGCACGTGCATCGGCAAGTTCACC
AAGGGCGGTAAGTTTCATCTCACCGTCCAGTCGGTGAATCTATTAGCCGCAAATGCCAAG
CACAAGGTCTGGCTTAAACCCACATCGGAAATGTCGTTTTTATACGGAAATCATGTTTTG
AAAGGTGGGTTGGGGAGGATTACGGAGAACATTGTGGCGGGTGATGGGGTTGTGGTGTTT
TCCATGTCGGATGTGCCTTTGGGGTTCGGGATTGCGGCAAAGTCGACTCAGGATTGTAGG
AAGTTGGACCCCAATGGGATTGTTGTGCTCCATCAGTCGGATATCGGGGAGTATTTGAGA
ATGGAGGATGAACTTTGAGGGGTTGCATGGATTGTTTCTGGGGATTTTGGGGGTGTTCAA
TCAAGTAAGTTCAGGGATATACTTGAGTTTCTGTAAGCCGGTGTTAGTTTTGATTACTA