Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g01110.t01
CDS Infomation

cds chromosome:12X:5:2869464:2876265:1 gene:VIT_05s0020g01110 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin acetylesterase [Source:UniProtKB/TrEMBL;Acc:F6HE55]
Sequence

ATGGACGGGGCAGATGAGAGTGGGAGGCGGCCAGGACTGAGGCTATTGTGGGTTTCTGGC
TTGATGGGGTTTCTTCTCTGCAACTGGGTTGATGGGTTTGAGAATTTGAATGTGACTAAA
CATCAGTTTATGGACGGCTATGGCTTTTCCACCCCTCCATTGATGGTGGGTCTTTCTCTT
ATTGCCGGAGCTGCTTCCACTGGAGCAGTATGCCTGGATGGAACATTACCTGGTTACCAC
CTCCACCGGGGATATGGGTCAGGGGCAAATAGTTGGCTCATTCATTTGGAGGGTGGAGGA
TGGTGCAATACAATTAGAACTTGTGTTTTCCGGAAAAAAACTCCTCATGGTTCATCAACA
CATATGGAAAAGCTGATACCATTTACAGGAATATTGAGTAACAGAGCTGAAGAAAATCCC
GATTTTTATAACTGGAATAGAGTCAAGCTTCGATACTGTGATGGTGCTTCTTTCAGTGGA
GACAGTCAAAATGAGGCCAAGACATTGTATTTCCGGGGACAACGCATCTGGTTAGCTGCT
ATGAAAGATCTGATGTCAAAGGGAATGCACTATGCTAATCAGGCTCTTCTTTCTGGATGC
TCAGCTGGGGGCTTAGCAGCTATACTGCACTGTGATGAGTTCAGGGAATTATTTCCAAGA
ACTACTAGAGTCAAGTGTCTCAGTGATGCAGGGTTATTTCTTGATGTGATTGATGTATCT
GGTGGGCGTACTTTAAGGCATATGTTTGGAGGCGTGGTCAGATTACAGCAAGTGGGGAAA
ATGCTGCCACAGGCTTGTACCAGCCACCTCAATCCAACCTTGTGCTTTTTCCCTCAGAAC
TTAATTCCCCTGACTAAGACCCCGCTTTTTCTTCTCAATGCAGCTTATGATTCATGGCAG
ATCCTGGCCAGTTTAGCTCCGCACTCAGCTGATCCCCGTGGCTACTGGCAGAAGTGCAGA
TTAAATTATGCATATTGCTCTTCATCACAAATTCAAGTTCTCCAAGATTTCAGAAAACAA
ATGCTAAATGCTGTAAGTGGCTTCTCAGGGTCCAAAAGAAATGGGCTATTCATAAACTCA
TGTTTTGCTCATTGTCAGACAGAGAGACAGGACACTTGGTTTGCTCATAATTCTCCTCGT
ATCGGAAACAAGGGCATCGCCCAATCTGTGGGGGACTGGTATTTTGATCGAGCTGAAGTC
AAGAGTATTGATTGTCCTTATCCTTGTGACAAGACCTGCCACAATCTGGTCTTCCGCCAA
AGTTTTTAG

Peptide Sequence

PEP ID

VIT_05s0020g01110.t01
PEP Infomation

pep chromosome:12X:5:2869464:2876265:1 gene:VIT_05s0020g01110 transcript:VIT_05s0020g01110.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin acetylesterase [Source:UniProtKB/TrEMBL;Acc:F6HE55]
Sequence

MDGADESGRRPGLRLLWVSGLMGFLLCNWVDGFENLNVTKHQFMDGYGFSTPPLMVGLSL
IAGAASTGAVCLDGTLPGYHLHRGYGSGANSWLIHLEGGGWCNTIRTCVFRKKTPHGSST
HMEKLIPFTGILSNRAEENPDFYNWNRVKLRYCDGASFSGDSQNEAKTLYFRGQRIWLAA
MKDLMSKGMHYANQALLSGCSAGGLAAILHCDEFRELFPRTTRVKCLSDAGLFLDVIDVS
GGRTLRHMFGGVVRLQQVGKMLPQACTSHLNPTLCFFPQNLIPLTKTPLFLLNAAYDSWQ
ILASLAPHSADPRGYWQKCRLNYAYCSSSQIQVLQDFRKQMLNAVSGFSGSKRNGLFINS
CFAHCQTERQDTWFAHNSPRIGNKGIAQSVGDWYFDRAEVKSIDCPYPCDKTCHNLVFRQ
SF

Transcript Sequence

Transcript ID

VIT_05s0020g01110.t01
Transcript Infomation

cdna chromosome:12X:5:2869464:2876265:1 gene:VIT_05s0020g01110 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin acetylesterase [Source:UniProtKB/TrEMBL;Acc:F6HE55]
Sequence

CTGAAATGGATTCCTTTCTCTCTCCCTCTCTCTGTCGTTCCATTGAATGAGATGAAGCTC
CGACTGTAGTTGCATTATACCATTGGCATTTGGTTCTCCCAATTTTTGATTGATAGTGGC
AGAGAGTGAGGATGGACGGGGCAGATGAGAGTGGGAGGCGGCCAGGACTGAGGCTATTGT
GGGTTTCTGGCTTGATGGGGTTTCTTCTCTGCAACTGGGTTGATGGGTTTGAGAATTTGA
ATGTGACTAAACATCAGTTTATGGACGGCTATGGCTTTTCCACCCCTCCATTGATGGTGG
GTCTTTCTCTTATTGCCGGAGCTGCTTCCACTGGAGCAGTATGCCTGGATGGAACATTAC
CTGGTTACCACCTCCACCGGGGATATGGGTCAGGGGCAAATAGTTGGCTCATTCATTTGG
AGGGTGGAGGATGGTGCAATACAATTAGAACTTGTGTTTTCCGGAAAAAAACTCCTCATG
GTTCATCAACACATATGGAAAAGCTGATACCATTTACAGGAATATTGAGTAACAGAGCTG
AAGAAAATCCCGATTTTTATAACTGGAATAGAGTCAAGCTTCGATACTGTGATGGTGCTT
CTTTCAGTGGAGACAGTCAAAATGAGGCCAAGACATTGTATTTCCGGGGACAACGCATCT
GGTTAGCTGCTATGAAAGATCTGATGTCAAAGGGAATGCACTATGCTAATCAGGCTCTTC
TTTCTGGATGCTCAGCTGGGGGCTTAGCAGCTATACTGCACTGTGATGAGTTCAGGGAAT
TATTTCCAAGAACTACTAGAGTCAAGTGTCTCAGTGATGCAGGGTTATTTCTTGATGTGA
TTGATGTATCTGGTGGGCGTACTTTAAGGCATATGTTTGGAGGCGTGGTCAGATTACAGC
AAGTGGGGAAAATGCTGCCACAGGCTTGTACCAGCCACCTCAATCCAACCTTGTGCTTTT
TCCCTCAGAACTTAATTCCCCTGACTAAGACCCCGCTTTTTCTTCTCAATGCAGCTTATG
ATTCATGGCAGATCCTGGCCAGTTTAGCTCCGCACTCAGCTGATCCCCGTGGCTACTGGC
AGAAGTGCAGATTAAATTATGCATATTGCTCTTCATCACAAATTCAAGTTCTCCAAGATT
TCAGAAAACAAATGCTAAATGCTGTAAGTGGCTTCTCAGGGTCCAAAAGAAATGGGCTAT
TCATAAACTCATGTTTTGCTCATTGTCAGACAGAGAGACAGGACACTTGGTTTGCTCATA
ATTCTCCTCGTATCGGAAACAAGGGCATCGCCCAATCTGTGGGGGACTGGTATTTTGATC
GAGCTGAAGTCAAGAGTATTGATTGTCCTTATCCTTGTGACAAGACCTGCCACAATCTGG
TCTTCCGCCAAAGTTTTTAGGAAAATGAAGCAAATCAGCCCCTGTTGCTACTCCCATTTT
TAGGTTTCTTCTGAGATGTCAAGCTTCATCCAAGTAACCAACAAACTAGTTAGAGTAACA
TGTAATATGTTATTTGATCTTCGATAAGATTGACAACATTTGTGTTTCCATTTGACAAGC
AATTGGAGGAATCTAGTGAAGGAATTTTATAAAA