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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0020g00600.t01
CDS Infomation

cds chromosome:12X:5:2487517:2488641:1 gene:VIT_05s0020g00600 gene_biotype:protein_coding transcript_biotype:protein_coding description:1-Cys peroxiredoxin [Source:UniProtKB/TrEMBL;Acc:D7T674]
Sequence

ATGCCGGGTCTGACTCTAGGAGACACTATACCAAACCTGGAAGTGGAAACCACACATGGG
AGGACCAAGCTCCATGACTACATCGGAGATAGATGGACCATAATCTTCTCCCACCCAGGC
GATTTCACGCCGGTGTGCACTACGGAGCTCGGTAAGATGGCTGCGTATACTGAGGAGTTT
GCTCGGAGAGAGGTGAAGCTCTTGGGATTGTCCTGTGACGATGTGCAGTCCCACAAGGAG
TGGATCAAGGACATTGAGGCCTACACTCCTGGGAGCAAGGTGACGTATCCGATCGCTGCG
GATCCAAAGAGAGAGATCATCAAACAACTAAACATGGTGGATCCGGATGAAAAAGACTCC
TCTGGAAACAATCTCCCGTCTCGAGCTCTCCACATCGTTGGCCCTGACAAGAAGATTAAG
CTGAGCTTTCTTTATCCGGCGAGCACCGGCCGGAACATGGATGAAGTGCTGAGGGCGCTG
GAGTCACTGCAGAAGGCGGCGAAGCACAAGATCGCAACTCCGGCGAACTGGAAACCGGGG
GAGCCGGTGCTGATACCGCCAAGCGTGTCCAACGAGCAAGCCAAACGGATGTTCCCTCAG
GGTTTCCAGACTTGTGGTCTTCCATCCAAAAAGGAATACCTTCGCTTCACCCAAGTCTGA

Peptide Sequence

PEP ID

VIT_05s0020g00600.t01
PEP Infomation

pep chromosome:12X:5:2487517:2488641:1 gene:VIT_05s0020g00600 transcript:VIT_05s0020g00600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:1-Cys peroxiredoxin [Source:UniProtKB/TrEMBL;Acc:D7T674]
Sequence

MPGLTLGDTIPNLEVETTHGRTKLHDYIGDRWTIIFSHPGDFTPVCTTELGKMAAYTEEF
ARREVKLLGLSCDDVQSHKEWIKDIEAYTPGSKVTYPIAADPKREIIKQLNMVDPDEKDS
SGNNLPSRALHIVGPDKKIKLSFLYPASTGRNMDEVLRALESLQKAAKHKIATPANWKPG
EPVLIPPSVSNEQAKRMFPQGFQTCGLPSKKEYLRFTQV

Transcript Sequence

Transcript ID

VIT_05s0020g00600.t01
Transcript Infomation

cdna chromosome:12X:5:2487517:2488641:1 gene:VIT_05s0020g00600 gene_biotype:protein_coding transcript_biotype:protein_coding description:1-Cys peroxiredoxin [Source:UniProtKB/TrEMBL;Acc:D7T674]
Sequence

CCAGTATTTTCTAACATTTTCCCAAGAAAAAAATGCCGGGTCTGACTCTAGGAGACACTA
TACCAAACCTGGAAGTGGAAACCACACATGGGAGGACCAAGCTCCATGACTACATCGGAG
ATAGATGGACCATAATCTTCTCCCACCCAGGCGATTTCACGCCGGTGTGCACTACGGAGC
TCGGTAAGATGGCTGCGTATACTGAGGAGTTTGCTCGGAGAGAGGTGAAGCTCTTGGGAT
TGTCCTGTGACGATGTGCAGTCCCACAAGGAGTGGATCAAGGACATTGAGGCCTACACTC
CTGGGAGCAAGGTGACGTATCCGATCGCTGCGGATCCAAAGAGAGAGATCATCAAACAAC
TAAACATGGTGGATCCGGATGAAAAAGACTCCTCTGGAAACAATCTCCCGTCTCGAGCTC
TCCACATCGTTGGCCCTGACAAGAAGATTAAGCTGAGCTTTCTTTATCCGGCGAGCACCG
GCCGGAACATGGATGAAGTGCTGAGGGCGCTGGAGTCACTGCAGAAGGCGGCGAAGCACA
AGATCGCAACTCCGGCGAACTGGAAACCGGGGGAGCCGGTGCTGATACCGCCAAGCGTGT
CCAACGAGCAAGCCAAACGGATGTTCCCTCAGGGTTTCCAGACTTGTGGTCTTCCATCCA
AAAAGGAATACCTTCGCTTCACCCAAGTCTGATCGTCCCACCACCATATATACATATATA
TCTCTTCTACTAATTATATGAAGTTGTAGTACCTTTTTCATTTTCCTTGGCTCCACATGT
TCCATGAAATGCCTCCTTGTGTAAAACTTATGTACTTATACACGTGTGTATTTATAATAT
GACTTAATTTAA